RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NINLQ9Y2I6 1382 aa18.05■□□□□ 0.48
THBS3-202ENST00000428962 GOLGA2Q08379 1002 aa18.04■□□□□ 0.48
THBS3-202ENST00000428962 NSD2O96028 1365 aa18.04■□□□□ 0.48
THBS3-202ENST00000428962 CGNL1Q0VF96 1302 aa18.03■□□□□ 0.48
THBS3-202ENST00000428962 ANKRD36BQ8N2N9 1353 aa18.03■□□□□ 0.48
THBS3-202ENST00000428962 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
THBS3-202ENST00000428962 PTPRMP28827 1452 aa18.02■□□□□ 0.48
THBS3-202ENST00000428962 MLECQ14165 292 aa18.02■□□□□ 0.47
THBS3-202ENST00000428962 NUTM2DQ5VT03 806 aaPredicted RBP18.02■□□□□ 0.47
THBS3-202ENST00000428962 EXOC6Q8TAG9 804 aa18.02■□□□□ 0.47
THBS3-202ENST00000428962 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.47
THBS3-202ENST00000428962 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
THBS3-202ENST00000428962 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
THBS3-202ENST00000428962 SPATA31D1Q6ZQQ2 1576 aa17.98■□□□□ 0.47
THBS3-202ENST00000428962 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
THBS3-202ENST00000428962 SHPRHQ149N8 1683 aa17.98■□□□□ 0.47
THBS3-202ENST00000428962 ATAD2Q6PL18 1390 aa17.97■□□□□ 0.47
THBS3-202ENST00000428962 SLFN5Q08AF3 891 aa17.97■□□□□ 0.47
THBS3-202ENST00000428962 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
THBS3-202ENST00000428962 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
THBS3-202ENST00000428962 YTHDC2Q9H6S0 1430 aaKnown RBP17.97■□□□□ 0.47
THBS3-202ENST00000428962 ALKQ9UM73 1620 aa17.96■□□□□ 0.47
THBS3-202ENST00000428962 APAF1O14727 1248 aa17.95■□□□□ 0.46
THBS3-202ENST00000428962 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
THBS3-202ENST00000428962 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
THBS3-202ENST00000428962 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
THBS3-202ENST00000428962 E9PSI1 815 aa17.95■□□□□ 0.46
THBS3-202ENST00000428962 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
THBS3-202ENST00000428962 TRMT2AQ8IZ69 625 aaKnown RBP17.94■□□□□ 0.46
THBS3-202ENST00000428962 STK26Q9P289 416 aa17.93■□□□□ 0.46
THBS3-202ENST00000428962 PLIN1O60240 522 aa17.92■□□□□ 0.46
THBS3-202ENST00000428962 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
THBS3-202ENST00000428962 ABCC11Q96J66 1382 aa17.92■□□□□ 0.46
THBS3-202ENST00000428962 RIMS1Q86UR5 1692 aaKnown RBP17.92■□□□□ 0.46
THBS3-202ENST00000428962 DLC1Q96QB1 1528 aa17.91■□□□□ 0.46
THBS3-202ENST00000428962 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
THBS3-202ENST00000428962 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
THBS3-202ENST00000428962 POGKQ9P215 609 aa17.91■□□□□ 0.46
THBS3-202ENST00000428962 A2ML1A8K2U0 1454 aa17.91■□□□□ 0.46
THBS3-202ENST00000428962 ANKRD26Q9UPS8 1709 aa17.9■□□□□ 0.46
THBS3-202ENST00000428962 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
THBS3-202ENST00000428962 A0A1W2PP64 1363 aa17.9■□□□□ 0.46
THBS3-202ENST00000428962 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
THBS3-202ENST00000428962 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
THBS3-202ENST00000428962 RUNDC1Q96C34 613 aa17.9■□□□□ 0.46
THBS3-202ENST00000428962 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.45
THBS3-202ENST00000428962 PRAM1Q96QH2 718 aa17.89■□□□□ 0.45
THBS3-202ENST00000428962 TERF2IPQ9NYB0 399 aa17.89■□□□□ 0.45
THBS3-202ENST00000428962 MED14O60244 1454 aa17.89■□□□□ 0.45
THBS3-202ENST00000428962 TNNT2P45379 298 aaPredicted RBP17.88■□□□□ 0.45
THBS3-202ENST00000428962 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
THBS3-202ENST00000428962 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
THBS3-202ENST00000428962 MTHFSP49914 203 aa17.88■□□□□ 0.45
THBS3-202ENST00000428962 FER1L4A9Z1Z3 1794 aa17.87■□□□□ 0.45
THBS3-202ENST00000428962 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
THBS3-202ENST00000428962 MINK1Q8N4C8 1332 aaPredicted RBP17.86■□□□□ 0.45
THBS3-202ENST00000428962 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
THBS3-202ENST00000428962 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
THBS3-202ENST00000428962 MSH5O43196 834 aa17.85■□□□□ 0.45
THBS3-202ENST00000428962 MS4A1P11836 297 aa17.85■□□□□ 0.45
THBS3-202ENST00000428962 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
THBS3-202ENST00000428962 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
THBS3-202ENST00000428962 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
THBS3-202ENST00000428962 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
THBS3-202ENST00000428962 C20orf194Q5TEA3 1177 aa17.83■□□□□ 0.44
THBS3-202ENST00000428962 SPINK5Q9NQ38 1064 aaPredicted RBP17.83■□□□□ 0.44
THBS3-202ENST00000428962 CD163L1Q9NR16 1453 aa17.83■□□□□ 0.44
THBS3-202ENST00000428962 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
THBS3-202ENST00000428962 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
THBS3-202ENST00000428962 ADGRB2O60241 1585 aa17.82■□□□□ 0.44
THBS3-202ENST00000428962 ANP32AP39687 249 aaKnown RBP17.82■□□□□ 0.44
THBS3-202ENST00000428962 WDR63Q8IWG1 891 aa17.82■□□□□ 0.44
THBS3-202ENST00000428962 ATP7BP35670 1465 aa17.81■□□□□ 0.44
THBS3-202ENST00000428962 TCP11L2Q8N4U5 519 aa17.81■□□□□ 0.44
THBS3-202ENST00000428962 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
THBS3-202ENST00000428962 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
THBS3-202ENST00000428962 CENPQQ7L2Z9 268 aaPredicted RBP17.8■□□□□ 0.44
THBS3-202ENST00000428962 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
THBS3-202ENST00000428962 NLRP1Q9C000 1473 aa17.8■□□□□ 0.44
THBS3-202ENST00000428962 LMTK3Q96Q04 1460 aa17.79■□□□□ 0.44
THBS3-202ENST00000428962 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
THBS3-202ENST00000428962 NRXN3Q9Y4C0 1643 aa17.79■□□□□ 0.44
THBS3-202ENST00000428962 HDGFP51858 240 aaKnown RBP17.79■□□□□ 0.44
THBS3-202ENST00000428962 KNDC1Q76NI1 1749 aa17.78■□□□□ 0.44
THBS3-202ENST00000428962 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
THBS3-202ENST00000428962 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
THBS3-202ENST00000428962 COL3A1P02461 1466 aaPredicted RBP17.78■□□□□ 0.44
THBS3-202ENST00000428962 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.44
THBS3-202ENST00000428962 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
THBS3-202ENST00000428962 GGNBP2Q9H3C7 697 aa17.77■□□□□ 0.43
THBS3-202ENST00000428962 FYB1O15117 783 aa17.76■□□□□ 0.43
THBS3-202ENST00000428962 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
THBS3-202ENST00000428962 TNRQ92752 1358 aa17.76■□□□□ 0.43
THBS3-202ENST00000428962 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
THBS3-202ENST00000428962 MYH16Q9H6N6 1097 aa17.75■□□□□ 0.43
THBS3-202ENST00000428962 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
THBS3-202ENST00000428962 BCAR3O75815 825 aa17.74■□□□□ 0.43
THBS3-202ENST00000428962 TECPR2O15040 1411 aa17.73■□□□□ 0.43
THBS3-202ENST00000428962 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
THBS3-202ENST00000428962 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms