RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 AMOTL2Q9Y2J4 779 aa17.83■□□□□ 0.44
CHEK1-203ENST00000428830 PTCH1Q13635 1447 aa17.83■□□□□ 0.44
CHEK1-203ENST00000428830 MYOM1P52179 1685 aa17.83■□□□□ 0.44
CHEK1-203ENST00000428830 MINK1Q8N4C8 1332 aaPredicted RBP17.82■□□□□ 0.44
CHEK1-203ENST00000428830 CHD2O14647 1828 aaKnown RBP17.82■□□□□ 0.44
CHEK1-203ENST00000428830 HSPA2P54652 639 aa17.81■□□□□ 0.44
CHEK1-203ENST00000428830 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
CHEK1-203ENST00000428830 ANP32CO43423 234 aa17.79■□□□□ 0.44
CHEK1-203ENST00000428830 KCNA6P17658 529 aa17.77■□□□□ 0.43
CHEK1-203ENST00000428830 SRPK2P78362 688 aaKnown RBP17.77■□□□□ 0.43
CHEK1-203ENST00000428830 PANK3Q9H999 370 aa17.76■□□□□ 0.43
CHEK1-203ENST00000428830 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
CHEK1-203ENST00000428830 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.75■□□□□ 0.43
CHEK1-203ENST00000428830 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
CHEK1-203ENST00000428830 CDK19Q9BWU1 502 aa17.75■□□□□ 0.43
CHEK1-203ENST00000428830 STRCQ7RTU9 1775 aa17.74■□□□□ 0.43
CHEK1-203ENST00000428830 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
CHEK1-203ENST00000428830 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
CHEK1-203ENST00000428830 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
CHEK1-203ENST00000428830 NWD1Q149M9 1564 aa17.73■□□□□ 0.43
CHEK1-203ENST00000428830 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
CHEK1-203ENST00000428830 TMC1Q8TDI8 760 aa17.72■□□□□ 0.43
CHEK1-203ENST00000428830 SLC12A5Q9H2X9 1139 aa17.7■□□□□ 0.42
CHEK1-203ENST00000428830 PRKRIP1Q9H875 184 aaPredicted RBP17.7■□□□□ 0.42
CHEK1-203ENST00000428830 KNSTRNQ9Y448 316 aa17.68■□□□□ 0.42
CHEK1-203ENST00000428830 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
CHEK1-203ENST00000428830 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
CHEK1-203ENST00000428830 NALCNQ8IZF0 1738 aa17.66■□□□□ 0.42
CHEK1-203ENST00000428830 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
CHEK1-203ENST00000428830 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
CHEK1-203ENST00000428830 ATP7BP35670 1465 aa17.65■□□□□ 0.42
CHEK1-203ENST00000428830 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
CHEK1-203ENST00000428830 CARD14Q9BXL6 1004 aa17.65■□□□□ 0.42
CHEK1-203ENST00000428830 TERF2IPQ9NYB0 399 aa17.64■□□□□ 0.41
CHEK1-203ENST00000428830 STRCP1A6NGW2 1772 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
CHEK1-203ENST00000428830 CABP1Q9NZU7 370 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 PPIP5K1Q6PFW1 1433 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 ADGRL3Q9HAR2 1447 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 A0A1W2PP64 1363 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
CHEK1-203ENST00000428830 CD163L1Q9NR16 1453 aa17.62■□□□□ 0.41
CHEK1-203ENST00000428830 NSD3Q9BZ95 1437 aa17.62■□□□□ 0.41
CHEK1-203ENST00000428830 PRR36Q9H6K5 1346 aa17.62■□□□□ 0.41
CHEK1-203ENST00000428830 RALBP1Q15311 655 aa17.62■□□□□ 0.41
CHEK1-203ENST00000428830 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
CHEK1-203ENST00000428830 TOPAZ1Q8N9V7 1692 aa17.62■□□□□ 0.41
CHEK1-203ENST00000428830 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
CHEK1-203ENST00000428830 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
CHEK1-203ENST00000428830 FMN2Q9NZ56 1722 aa17.61■□□□□ 0.41
CHEK1-203ENST00000428830 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
CHEK1-203ENST00000428830 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
CHEK1-203ENST00000428830 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
CHEK1-203ENST00000428830 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
CHEK1-203ENST00000428830 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
CHEK1-203ENST00000428830 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
CHEK1-203ENST00000428830 C14orf37Q86TY3 774 aa17.59■□□□□ 0.41
CHEK1-203ENST00000428830 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
CHEK1-203ENST00000428830 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
CHEK1-203ENST00000428830 CGNL1Q0VF96 1302 aa17.58■□□□□ 0.4
CHEK1-203ENST00000428830 NUTM2FA1L443 756 aa17.58■□□□□ 0.4
CHEK1-203ENST00000428830 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
CHEK1-203ENST00000428830 NCOA3Q9Y6Q9 1424 aa17.57■□□□□ 0.4
CHEK1-203ENST00000428830 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
CHEK1-203ENST00000428830 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
CHEK1-203ENST00000428830 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
CHEK1-203ENST00000428830 MON2Q7Z3U7 1717 aa17.55■□□□□ 0.4
CHEK1-203ENST00000428830 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
CHEK1-203ENST00000428830 NSD2O96028 1365 aa17.54■□□□□ 0.4
CHEK1-203ENST00000428830 C19orf44Q9H6X5 657 aa17.54■□□□□ 0.4
CHEK1-203ENST00000428830 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
CHEK1-203ENST00000428830 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
CHEK1-203ENST00000428830 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
CHEK1-203ENST00000428830 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
CHEK1-203ENST00000428830 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
CHEK1-203ENST00000428830 ACEP12821 1306 aa17.51■□□□□ 0.39
CHEK1-203ENST00000428830 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
CHEK1-203ENST00000428830 DCCP43146 1447 aa17.51■□□□□ 0.39
CHEK1-203ENST00000428830 CCDC184Q52MB2 194 aa17.51■□□□□ 0.39
CHEK1-203ENST00000428830 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
CHEK1-203ENST00000428830 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
CHEK1-203ENST00000428830 LRRC7Q96NW7 1537 aa17.5■□□□□ 0.39
CHEK1-203ENST00000428830 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
CHEK1-203ENST00000428830 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
CHEK1-203ENST00000428830 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
CHEK1-203ENST00000428830 NRKQ7Z2Y5 1582 aa17.48■□□□□ 0.39
CHEK1-203ENST00000428830 FYB1O15117 783 aa17.48■□□□□ 0.39
CHEK1-203ENST00000428830 MORC1Q86VD1 984 aa17.48■□□□□ 0.39
CHEK1-203ENST00000428830 MSH6P52701 1360 aa17.48■□□□□ 0.39
CHEK1-203ENST00000428830 USP6P35125 1406 aa17.48■□□□□ 0.39
CHEK1-203ENST00000428830 ATF3P18847 181 aa17.47■□□□□ 0.39
CHEK1-203ENST00000428830 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
CHEK1-203ENST00000428830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.391e-6■■■■■ 28.9
CHEK1-203ENST00000428830 NGDNQ8NEJ9 315 aaKnown RBP17.47■□□□□ 0.39
CHEK1-203ENST00000428830 PHF8Q9UPP1 1060 aa17.46■□□□□ 0.39
CHEK1-203ENST00000428830 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
CHEK1-203ENST00000428830 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
CHEK1-203ENST00000428830 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms