RNA–Protein interactions for RNA: ENST00000428800.5

LIPA-204, Transcript of lipase A, lysosomal acid type, humanhuman

TSL 1 (best)

Gene LIPA, Length 1,055 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-204ENST00000428800 JCADQ9P266 1359 aa18.73■□□□□ 0.59
LIPA-204ENST00000428800 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
LIPA-204ENST00000428800 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
LIPA-204ENST00000428800 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
LIPA-204ENST00000428800 AHDC1Q5TGY3 1603 aaPredicted RBP18.73■□□□□ 0.59
LIPA-204ENST00000428800 DCCP43146 1447 aa18.73■□□□□ 0.59
LIPA-204ENST00000428800 C1orf167Q5SNV9 1468 aa18.72■□□□□ 0.59
LIPA-204ENST00000428800 C14orf93Q9H972 538 aaKnown RBP18.72■□□□□ 0.59
LIPA-204ENST00000428800 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
LIPA-204ENST00000428800 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
LIPA-204ENST00000428800 DCAF11Q8TEB1 546 aa18.7■□□□□ 0.58
LIPA-204ENST00000428800 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
LIPA-204ENST00000428800 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
LIPA-204ENST00000428800 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
LIPA-204ENST00000428800 NHSL1Q5SYE7 1610 aa18.68■□□□□ 0.58
LIPA-204ENST00000428800 DHX57Q6P158 1386 aaKnown RBP18.68■□□□□ 0.58
LIPA-204ENST00000428800 HRCP23327 699 aa18.67■□□□□ 0.58
LIPA-204ENST00000428800 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
LIPA-204ENST00000428800 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
LIPA-204ENST00000428800 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
LIPA-204ENST00000428800 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
LIPA-204ENST00000428800 TECPR2O15040 1411 aa18.65■□□□□ 0.58
LIPA-204ENST00000428800 MYOM2P54296 1465 aa18.65■□□□□ 0.58
LIPA-204ENST00000428800 SHPRHQ149N8 1683 aa18.64■□□□□ 0.57
LIPA-204ENST00000428800 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
LIPA-204ENST00000428800 MEX3CQ5U5Q3 659 aaKnown RBP18.63■□□□□ 0.57
LIPA-204ENST00000428800 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
LIPA-204ENST00000428800 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
LIPA-204ENST00000428800 FOXO3O43524 673 aa18.62■□□□□ 0.57
LIPA-204ENST00000428800 RGPD8O14715 1765 aaPredicted RBP18.62■□□□□ 0.57
LIPA-204ENST00000428800 PNPLA6Q8IY17 1366 aa18.61■□□□□ 0.57
LIPA-204ENST00000428800 SPATA31A6Q5VVP1 1343 aa18.61■□□□□ 0.57
LIPA-204ENST00000428800 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
LIPA-204ENST00000428800 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
LIPA-204ENST00000428800 SIN3AQ96ST3 1273 aa18.6■□□□□ 0.57
LIPA-204ENST00000428800 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
LIPA-204ENST00000428800 CDC42BPGQ6DT37 1551 aa18.59■□□□□ 0.57
LIPA-204ENST00000428800 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
LIPA-204ENST00000428800 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
LIPA-204ENST00000428800 PLEKHG5O94827 1062 aa18.58■□□□□ 0.56
LIPA-204ENST00000428800 POGKQ9P215 609 aa18.57■□□□□ 0.56
LIPA-204ENST00000428800 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
LIPA-204ENST00000428800 MINK1Q8N4C8 1332 aaPredicted RBP18.56■□□□□ 0.56
LIPA-204ENST00000428800 C8orf37Q96NL8 207 aa18.56■□□□□ 0.56
LIPA-204ENST00000428800 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
LIPA-204ENST00000428800 LAMC1P11047 1609 aa18.55■□□□□ 0.56
LIPA-204ENST00000428800 AFF2P51816 1311 aa18.54■□□□□ 0.56
LIPA-204ENST00000428800 SIRT1Q96EB6 747 aa18.54■□□□□ 0.56
LIPA-204ENST00000428800 PXDNQ92626 1479 aa18.53■□□□□ 0.56
LIPA-204ENST00000428800 PMFBP1Q8TBY8 1022 aa18.53■□□□□ 0.56
LIPA-204ENST00000428800 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
LIPA-204ENST00000428800 USP32Q8NFA0 1604 aa18.51■□□□□ 0.55
LIPA-204ENST00000428800 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 KRT28Q7Z3Y7 464 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 PHF8Q9UPP1 1060 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
LIPA-204ENST00000428800 CABLES1Q8TDN4 633 aa18.48■□□□□ 0.55
LIPA-204ENST00000428800 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
LIPA-204ENST00000428800 ARHGEF28Q8N1W1 1705 aaKnown RBP18.46■□□□□ 0.55
LIPA-204ENST00000428800 QTRT2Q9H974 415 aaKnown RBP18.45■□□□□ 0.54
LIPA-204ENST00000428800 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
LIPA-204ENST00000428800 WASLO00401 505 aaPredicted RBP18.43■□□□□ 0.54
LIPA-204ENST00000428800 RXRBP28702 533 aa18.43■□□□□ 0.54
LIPA-204ENST00000428800 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
LIPA-204ENST00000428800 LMOD2Q6P5Q4 547 aa18.43■□□□□ 0.54
LIPA-204ENST00000428800 COL22A1Q8NFW1 1626 aaPredicted RBP18.42■□□□□ 0.54
LIPA-204ENST00000428800 PSME1Q06323 249 aa18.41■□□□□ 0.54
LIPA-204ENST00000428800 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
LIPA-204ENST00000428800 KIF1AQ12756 1690 aa18.41■□□□□ 0.54
LIPA-204ENST00000428800 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
LIPA-204ENST00000428800 CDK19Q9BWU1 502 aa18.4■□□□□ 0.54
LIPA-204ENST00000428800 USP21Q9UK80 565 aa18.4■□□□□ 0.54
LIPA-204ENST00000428800 NBPF8Q3BBV2 869 aa18.38■□□□□ 0.53
LIPA-204ENST00000428800 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
LIPA-204ENST00000428800 FNBP4Q8N3X1 1017 aaPredicted RBP18.37■□□□□ 0.53
LIPA-204ENST00000428800 ANKARQ7Z5J8 1434 aa18.36■□□□□ 0.53
LIPA-204ENST00000428800 TULP4Q9NRJ4 1543 aa18.36■□□□□ 0.53
LIPA-204ENST00000428800 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
LIPA-204ENST00000428800 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
LIPA-204ENST00000428800 BCL9LQ86UU0 1499 aa18.35■□□□□ 0.53
LIPA-204ENST00000428800 RGS12O14924 1447 aa18.35■□□□□ 0.53
LIPA-204ENST00000428800 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
LIPA-204ENST00000428800 RBM6P78332 1123 aaKnown RBP18.34■□□□□ 0.53
LIPA-204ENST00000428800 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
LIPA-204ENST00000428800 NUTM2GQ5VZR2 741 aa18.34■□□□□ 0.53
LIPA-204ENST00000428800 NGDNQ8NEJ9 315 aaKnown RBP18.34■□□□□ 0.53
LIPA-204ENST00000428800 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
LIPA-204ENST00000428800 TRPM3Q9HCF6 1732 aaPredicted RBP18.34■□□□□ 0.53
LIPA-204ENST00000428800 ATP7BP35670 1465 aa18.33■□□□□ 0.53
LIPA-204ENST00000428800 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
LIPA-204ENST00000428800 UPF1Q92900 1129 aaKnown RBP eCLIP18.32■□□□□ 0.52
LIPA-204ENST00000428800 SBNO1A3KN83 1393 aa18.31■□□□□ 0.52
LIPA-204ENST00000428800 HAP1P54257 671 aaPredicted RBP18.31■□□□□ 0.52
LIPA-204ENST00000428800 ATRNO75882 1429 aa18.31■□□□□ 0.52
LIPA-204ENST00000428800 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
LIPA-204ENST00000428800 ABCA3Q99758 1704 aa18.3■□□□□ 0.52
LIPA-204ENST00000428800 FAM83GA6ND36 823 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms