RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
KIF3A-204ENST00000428744 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
KIF3A-204ENST00000428744 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
KIF3A-204ENST00000428744 FCF1Q9Y324 198 aaKnown RBP8.23□□□□□ -1.09
KIF3A-204ENST00000428744 CLCN1P35523 988 aa8.22□□□□□ -1.09
KIF3A-204ENST00000428744 PKD2L1Q9P0L9 805 aa8.22□□□□□ -1.09
KIF3A-204ENST00000428744 MMP16P51512 607 aa8.21□□□□□ -1.1
KIF3A-204ENST00000428744 USP46P62068 366 aa8.21□□□□□ -1.1
KIF3A-204ENST00000428744 Q3C1V9 767 aa8.21□□□□□ -1.1
KIF3A-204ENST00000428744 ZNF787Q6DD87 383 aa8.21□□□□□ -1.1
KIF3A-204ENST00000428744 HLA-CQ95604 372 aa8.21□□□□□ -1.1
KIF3A-204ENST00000428744 TNFRSF10AO00220 468 aa8.2□□□□□ -1.1
KIF3A-204ENST00000428744 DGAT1O75907 488 aa8.2□□□□□ -1.1
KIF3A-204ENST00000428744 HOXA2O43364 376 aa8.19□□□□□ -1.1
KIF3A-204ENST00000428744 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
KIF3A-204ENST00000428744 MYT1Q01538 1121 aa8.19□□□□□ -1.1
KIF3A-204ENST00000428744 PDE4DQ08499 809 aa8.18□□□□□ -1.1
KIF3A-204ENST00000428744 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
KIF3A-204ENST00000428744 DXOO77932 396 aaKnown RBP8.16□□□□□ -1.1
KIF3A-204ENST00000428744 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
KIF3A-204ENST00000428744 GUCA2AQ02747 115 aa8.16□□□□□ -1.1
KIF3A-204ENST00000428744 FOXC1Q12948 553 aa8.16□□□□□ -1.1
KIF3A-204ENST00000428744 PKDCCQ504Y2 493 aa8.16□□□□□ -1.1
KIF3A-204ENST00000428744 TOR4AQ9NXH8 423 aa8.15□□□□□ -1.1
KIF3A-204ENST00000428744 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
KIF3A-204ENST00000428744 TMEM132AQ24JP5 1023 aa8.14□□□□□ -1.11
KIF3A-204ENST00000428744 ERICH6Q7L0X2 663 aa8.14□□□□□ -1.11
KIF3A-204ENST00000428744 SYMPKQ92797 1274 aaKnown RBP8.14□□□□□ -1.11
KIF3A-204ENST00000428744 FAM187AA6NFU0 413 aa8.13□□□□□ -1.11
KIF3A-204ENST00000428744 ZBTB24O43167 697 aaPredicted RBP8.13□□□□□ -1.11
KIF3A-204ENST00000428744 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
KIF3A-204ENST00000428744 PARP9Q8IXQ6 854 aa8.13□□□□□ -1.11
KIF3A-204ENST00000428744 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
KIF3A-204ENST00000428744 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
KIF3A-204ENST00000428744 GTF3C3Q9Y5Q9 886 aa8.13□□□□□ -1.11
KIF3A-204ENST00000428744 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
KIF3A-204ENST00000428744 SPIRE2Q8WWL2 714 aa8.12□□□□□ -1.11
KIF3A-204ENST00000428744 TRIM32Q13049 653 aa8.11□□□□□ -1.11
KIF3A-204ENST00000428744 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
KIF3A-204ENST00000428744 POTECB2RU33 542 aa8.1□□□□□ -1.11
KIF3A-204ENST00000428744 AVPP01185 164 aa8.1□□□□□ -1.11
KIF3A-204ENST00000428744 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
KIF3A-204ENST00000428744 WNT7AO00755 349 aa8.09□□□□□ -1.11
KIF3A-204ENST00000428744 FDX1P10109 184 aa8.09□□□□□ -1.11
KIF3A-204ENST00000428744 JUNDP17535 347 aa8.09□□□□□ -1.11
KIF3A-204ENST00000428744 RETREG3Q86VR2 466 aa8.09□□□□□ -1.11
KIF3A-204ENST00000428744 MOXD2PA6NHM9 499 aa8.08□□□□□ -1.12
KIF3A-204ENST00000428744 NDUFV2P19404 249 aa8.08□□□□□ -1.12
KIF3A-204ENST00000428744 BRPF1P55201 1214 aaPredicted RBP8.08□□□□□ -1.12
KIF3A-204ENST00000428744 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
KIF3A-204ENST00000428744 CRIPAKQ8N1N5 446 aa8.08□□□□□ -1.12
KIF3A-204ENST00000428744 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
KIF3A-204ENST00000428744 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
KIF3A-204ENST00000428744 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
KIF3A-204ENST00000428744 SKOR1P84550 965 aa8.06□□□□□ -1.12
KIF3A-204ENST00000428744 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
KIF3A-204ENST00000428744 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
KIF3A-204ENST00000428744 MRGPRX2Q96LB1 330 aa8.06□□□□□ -1.12
KIF3A-204ENST00000428744 BEGAINQ9BUH8 593 aa8.06□□□□□ -1.12
KIF3A-204ENST00000428744 GJA5P36382 358 aa8.05□□□□□ -1.12
KIF3A-204ENST00000428744 NEUROD2Q15784 382 aa8.05□□□□□ -1.12
KIF3A-204ENST00000428744 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
KIF3A-204ENST00000428744 C6orf229H3BNL8 230 aa8.04□□□□□ -1.12
KIF3A-204ENST00000428744 MS4A1P11836 297 aa8.04□□□□□ -1.12
KIF3A-204ENST00000428744 SMPD1P17405 629 aa8.04□□□□□ -1.12
KIF3A-204ENST00000428744 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
KIF3A-204ENST00000428744 DACH1Q9UI36 760 aa8.04□□□□□ -1.12
KIF3A-204ENST00000428744 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
KIF3A-204ENST00000428744 WNT7BP56706 349 aa8.03□□□□□ -1.12
KIF3A-204ENST00000428744 NUDT12Q9BQG2 462 aa8.03□□□□□ -1.12
KIF3A-204ENST00000428744 RSPH6AQ9H0K4 717 aa8.03□□□□□ -1.12
KIF3A-204ENST00000428744 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
KIF3A-204ENST00000428744 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
KIF3A-204ENST00000428744 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
KIF3A-204ENST00000428744 TBC1D2Q9BYX2 928 aa8.02□□□□□ -1.13
KIF3A-204ENST00000428744 J3QL48 77 aa8.01□□□□□ -1.13
KIF3A-204ENST00000428744 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
KIF3A-204ENST00000428744 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
KIF3A-204ENST00000428744 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
KIF3A-204ENST00000428744 PCDHB15Q9Y5E8 787 aa8.01□□□□□ -1.13
KIF3A-204ENST00000428744 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 AXIN1O15169 862 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 MTMR2Q13614 643 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 PTPRNQ16849 979 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 DESI1Q6ICB0 168 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 RSBN1LQ6PCB5 846 aaPredicted RBP8□□□□□ -1.13
KIF3A-204ENST00000428744 PRR7Q8TB68 274 aa8□□□□□ -1.13
KIF3A-204ENST00000428744 SPTLC1O15269 473 aa7.99□□□□□ -1.13
KIF3A-204ENST00000428744 SIAH2O43255 324 aa7.99□□□□□ -1.13
KIF3A-204ENST00000428744 CCNYL3P0C7X3 344 aa7.99□□□□□ -1.13
KIF3A-204ENST00000428744 C14orf37Q86TY3 774 aa7.98□□□□□ -1.13
KIF3A-204ENST00000428744 SH3BP2P78314 561 aa7.97□□□□□ -1.13
KIF3A-204ENST00000428744 HPS1Q92902 700 aa7.97□□□□□ -1.13
KIF3A-204ENST00000428744 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
KIF3A-204ENST00000428744 GMPR2Q9P2T1 348 aaKnown RBP7.97□□□□□ -1.13
KIF3A-204ENST00000428744 HRCP23327 699 aa7.96□□□□□ -1.14
KIF3A-204ENST00000428744 KCNH2Q12809 1159 aa7.96□□□□□ -1.14
KIF3A-204ENST00000428744 SH3D19Q5HYK7 790 aa7.96□□□□□ -1.14
KIF3A-204ENST00000428744 RIC3Q7Z5B4 369 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms