RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 PLEKHH1Q9ULM0 1364 aa18.46■□□□□ 0.55
NCBP2-205ENST00000428425 YTHDC2Q9H6S0 1430 aaKnown RBP18.46■□□□□ 0.55
NCBP2-205ENST00000428425 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
NCBP2-205ENST00000428425 PRAM1Q96QH2 718 aa18.45■□□□□ 0.54
NCBP2-205ENST00000428425 PDE3BQ13370 1112 aa18.45■□□□□ 0.54
NCBP2-205ENST00000428425 CCDC146Q8IYE0 955 aa18.45■□□□□ 0.54
NCBP2-205ENST00000428425 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
NCBP2-205ENST00000428425 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
NCBP2-205ENST00000428425 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
NCBP2-205ENST00000428425 RIMS2Q9UQ26 1411 aa18.43■□□□□ 0.54
NCBP2-205ENST00000428425 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
NCBP2-205ENST00000428425 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
NCBP2-205ENST00000428425 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
NCBP2-205ENST00000428425 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
NCBP2-205ENST00000428425 SRPK2P78362 688 aaKnown RBP18.4■□□□□ 0.54
NCBP2-205ENST00000428425 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
NCBP2-205ENST00000428425 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.54
NCBP2-205ENST00000428425 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
NCBP2-205ENST00000428425 POGKQ9P215 609 aa18.39■□□□□ 0.53
NCBP2-205ENST00000428425 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.53
NCBP2-205ENST00000428425 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
NCBP2-205ENST00000428425 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
NCBP2-205ENST00000428425 NRXN3Q9Y4C0 1643 aa18.38■□□□□ 0.53
NCBP2-205ENST00000428425 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
NCBP2-205ENST00000428425 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
NCBP2-205ENST00000428425 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
NCBP2-205ENST00000428425 APAF1O14727 1248 aa18.36■□□□□ 0.53
NCBP2-205ENST00000428425 WAPLQ7Z5K2 1190 aa18.36■□□□□ 0.53
NCBP2-205ENST00000428425 CD163L1Q9NR16 1453 aa18.35■□□□□ 0.53
NCBP2-205ENST00000428425 PLIN1O60240 522 aa18.34■□□□□ 0.53
NCBP2-205ENST00000428425 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
NCBP2-205ENST00000428425 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.53
NCBP2-205ENST00000428425 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.53
NCBP2-205ENST00000428425 CDK19Q9BWU1 502 aa18.33■□□□□ 0.53
NCBP2-205ENST00000428425 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.53
NCBP2-205ENST00000428425 METP08581 1390 aa18.33■□□□□ 0.52
NCBP2-205ENST00000428425 MTHFSP49914 203 aa18.33■□□□□ 0.52
NCBP2-205ENST00000428425 TNRQ92752 1358 aa18.32■□□□□ 0.52
NCBP2-205ENST00000428425 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
NCBP2-205ENST00000428425 ABCC11Q96J66 1382 aa18.32■□□□□ 0.52
NCBP2-205ENST00000428425 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
NCBP2-205ENST00000428425 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
NCBP2-205ENST00000428425 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
NCBP2-205ENST00000428425 GGNBP2Q9H3C7 697 aa18.3■□□□□ 0.52
NCBP2-205ENST00000428425 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
NCBP2-205ENST00000428425 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
NCBP2-205ENST00000428425 CEBPAP49715 358 aaPredicted RBP18.29■□□□□ 0.52
NCBP2-205ENST00000428425 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
NCBP2-205ENST00000428425 UBR1Q8IWV7 1749 aa18.28■□□□□ 0.52
NCBP2-205ENST00000428425 NSD2O96028 1365 aa18.28■□□□□ 0.52
NCBP2-205ENST00000428425 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
NCBP2-205ENST00000428425 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
NCBP2-205ENST00000428425 FYB1O15117 783 aa18.26■□□□□ 0.51
NCBP2-205ENST00000428425 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
NCBP2-205ENST00000428425 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
NCBP2-205ENST00000428425 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
NCBP2-205ENST00000428425 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.25■□□□□ 0.51
NCBP2-205ENST00000428425 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
NCBP2-205ENST00000428425 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
NCBP2-205ENST00000428425 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
NCBP2-205ENST00000428425 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
NCBP2-205ENST00000428425 IQSEC2Q5JU85 1478 aa18.23■□□□□ 0.51
NCBP2-205ENST00000428425 NEUROD2Q15784 382 aa18.23■□□□□ 0.51
NCBP2-205ENST00000428425 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
NCBP2-205ENST00000428425 CRBNQ96SW2 442 aa18.22■□□□□ 0.51
NCBP2-205ENST00000428425 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
NCBP2-205ENST00000428425 LTKP29376 864 aa18.21■□□□□ 0.51
NCBP2-205ENST00000428425 WWC1Q8IX03 1113 aa18.21■□□□□ 0.51
NCBP2-205ENST00000428425 CFAP53Q96M91 514 aa18.21■□□□□ 0.51
NCBP2-205ENST00000428425 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.5
NCBP2-205ENST00000428425 TCP11L2Q8N4U5 519 aa18.21■□□□□ 0.5
NCBP2-205ENST00000428425 RUNDC1Q96C34 613 aa18.21■□□□□ 0.5
NCBP2-205ENST00000428425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
NCBP2-205ENST00000428425 ADAMTS13Q76LX8 1427 aa18.2■□□□□ 0.5
NCBP2-205ENST00000428425 COL3A1P02461 1466 aaPredicted RBP18.19■□□□□ 0.5
NCBP2-205ENST00000428425 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
NCBP2-205ENST00000428425 FBLN1P23142 703 aa18.19■□□□□ 0.5
NCBP2-205ENST00000428425 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
NCBP2-205ENST00000428425 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
NCBP2-205ENST00000428425 C3P01024 1663 aa18.18■□□□□ 0.5
NCBP2-205ENST00000428425 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
NCBP2-205ENST00000428425 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
NCBP2-205ENST00000428425 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
NCBP2-205ENST00000428425 TECPR2O15040 1411 aa18.18■□□□□ 0.5
NCBP2-205ENST00000428425 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
NCBP2-205ENST00000428425 MED14O60244 1454 aa18.18■□□□□ 0.5
NCBP2-205ENST00000428425 E9PSI1 815 aa18.18■□□□□ 0.5
NCBP2-205ENST00000428425 ROBO2Q9HCK4 1378 aa18.17■□□□□ 0.5
NCBP2-205ENST00000428425 CPS1P31327 1500 aa18.17■□□□□ 0.5
NCBP2-205ENST00000428425 ATP7BP35670 1465 aa18.16■□□□□ 0.5
NCBP2-205ENST00000428425 PPIP5K1Q6PFW1 1433 aa18.16■□□□□ 0.5
NCBP2-205ENST00000428425 HDGFP51858 240 aaKnown RBP18.15■□□□□ 0.5
NCBP2-205ENST00000428425 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
NCBP2-205ENST00000428425 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
NCBP2-205ENST00000428425 BCAR3O75815 825 aa18.15■□□□□ 0.5
NCBP2-205ENST00000428425 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.5
NCBP2-205ENST00000428425 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
NCBP2-205ENST00000428425 NUDT16Q96DE0 195 aaKnown RBP18.14■□□□□ 0.49
NCBP2-205ENST00000428425 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.49
NCBP2-205ENST00000428425 CPSF1Q10570 1443 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms