RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 LRPPRCP42704 1394 aaKnown RBP25.92■■□□□ 1.74
DDR1-235ENST00000428153 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
DDR1-235ENST00000428153 PIK3C2GO75747 1445 aa25.91■■□□□ 1.74
DDR1-235ENST00000428153 RGL3Q3MIN7 710 aa25.91■■□□□ 1.74
DDR1-235ENST00000428153 KNDC1Q76NI1 1749 aa25.9■■□□□ 1.74
DDR1-235ENST00000428153 NPHP3Q7Z494 1330 aa25.88■■□□□ 1.73
DDR1-235ENST00000428153 C8orf37Q96NL8 207 aa25.87■■□□□ 1.73
DDR1-235ENST00000428153 COL22A1Q8NFW1 1626 aaPredicted RBP25.86■■□□□ 1.73
DDR1-235ENST00000428153 RBM6P78332 1123 aaKnown RBP25.85■■□□□ 1.73
DDR1-235ENST00000428153 SIRT1Q96EB6 747 aa25.85■■□□□ 1.73
DDR1-235ENST00000428153 UPF1Q92900 1129 aaKnown RBP eCLIP25.84■■□□□ 1.73
DDR1-235ENST00000428153 ESCO1Q5FWF5 840 aa25.83■■□□□ 1.73
DDR1-235ENST00000428153 QTRT2Q9H974 415 aaKnown RBP25.83■■□□□ 1.73
DDR1-235ENST00000428153 NRXN1Q9ULB1 1477 aa25.83■■□□□ 1.73
DDR1-235ENST00000428153 YTHDC2Q9H6S0 1430 aaKnown RBP25.82■■□□□ 1.72
DDR1-235ENST00000428153 MYOM2P54296 1465 aa25.82■■□□□ 1.72
DDR1-235ENST00000428153 PXDNQ92626 1479 aa25.81■■□□□ 1.72
DDR1-235ENST00000428153 WAPLQ7Z5K2 1190 aa25.81■■□□□ 1.72
DDR1-235ENST00000428153 NGLY1Q96IV0 654 aa25.81■■□□□ 1.72
DDR1-235ENST00000428153 STK26Q9P289 416 aa25.81■■□□□ 1.72
DDR1-235ENST00000428153 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
DDR1-235ENST00000428153 ADAMTS2O95450 1211 aa25.79■■□□□ 1.72
DDR1-235ENST00000428153 TMEM132EQ6IEE7 984 aa25.79■■□□□ 1.72
DDR1-235ENST00000428153 FNBP4Q8N3X1 1017 aaPredicted RBP25.78■■□□□ 1.72
DDR1-235ENST00000428153 RGS12O14924 1447 aa25.77■■□□□ 1.72
DDR1-235ENST00000428153 FOXO3O43524 673 aa25.76■■□□□ 1.71
DDR1-235ENST00000428153 FMN2Q9NZ56 1722 aa25.76■■□□□ 1.71
DDR1-235ENST00000428153 KIF1AQ12756 1690 aa25.75■■□□□ 1.71
DDR1-235ENST00000428153 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
DDR1-235ENST00000428153 PLEKHH1Q9ULM0 1364 aa25.75■■□□□ 1.71
DDR1-235ENST00000428153 RAB3GAP2Q9H2M9 1393 aa25.74■■□□□ 1.71
DDR1-235ENST00000428153 TRPC5Q9UL62 973 aaPredicted RBP25.74■■□□□ 1.71
DDR1-235ENST00000428153 USP21Q9UK80 565 aa25.73■■□□□ 1.71
DDR1-235ENST00000428153 ATRNO75882 1429 aa25.7■■□□□ 1.7
DDR1-235ENST00000428153 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
DDR1-235ENST00000428153 MARF1Q9Y4F3 1742 aaKnown RBP25.69■■□□□ 1.7
DDR1-235ENST00000428153 CFAP70Q5T0N1 1121 aa25.69■■□□□ 1.7
DDR1-235ENST00000428153 HRCP23327 699 aa25.68■■□□□ 1.7
DDR1-235ENST00000428153 STAC3Q96MF2 364 aa25.68■■□□□ 1.7
DDR1-235ENST00000428153 NUTM2FA1L443 756 aa25.67■■□□□ 1.7
DDR1-235ENST00000428153 SPATA31A3Q5VYP0 1347 aa25.66■■□□□ 1.7
DDR1-235ENST00000428153 XPCQ01831 940 aaPredicted RBP25.65■■□□□ 1.7
DDR1-235ENST00000428153 BCL9LQ86UU0 1499 aa25.64■■□□□ 1.69
DDR1-235ENST00000428153 ATAD2Q6PL18 1390 aa25.63■■□□□ 1.69
DDR1-235ENST00000428153 ADGRB1O14514 1584 aa25.62■■□□□ 1.69
DDR1-235ENST00000428153 PRAM1Q96QH2 718 aa25.62■■□□□ 1.69
DDR1-235ENST00000428153 PHF8Q9UPP1 1060 aa25.62■■□□□ 1.69
DDR1-235ENST00000428153 ANKARQ7Z5J8 1434 aa25.62■■□□□ 1.69
DDR1-235ENST00000428153 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
DDR1-235ENST00000428153 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.61■■□□□ 1.69
DDR1-235ENST00000428153 PSME1Q06323 249 aa25.61■■□□□ 1.69
DDR1-235ENST00000428153 KRT28Q7Z3Y7 464 aa25.61■■□□□ 1.69
DDR1-235ENST00000428153 TNS3Q68CZ2 1445 aa25.6■■□□□ 1.69
DDR1-235ENST00000428153 SBNO1A3KN83 1393 aa25.59■■□□□ 1.69
DDR1-235ENST00000428153 EP400Q96L91 3159 aa25.59■■□□□ 1.69
DDR1-235ENST00000428153 SLIT2O94813 1529 aa25.58■■□□□ 1.69
DDR1-235ENST00000428153 POGKQ9P215 609 aa25.58■■□□□ 1.69
DDR1-235ENST00000428153 RGPD8O14715 1765 aaPredicted RBP25.58■■□□□ 1.69
DDR1-235ENST00000428153 USP32Q8NFA0 1604 aa25.56■■□□□ 1.68
DDR1-235ENST00000428153 GJD4Q96KN9 370 aaPredicted RBP25.56■■□□□ 1.68
DDR1-235ENST00000428153 EIF3AQ14152 1382 aaKnown RBP25.56■■□□□ 1.68
DDR1-235ENST00000428153 UNC5CLQ8IV45 518 aa25.55■■□□□ 1.68
DDR1-235ENST00000428153 ARHGEF10O15013 1369 aa25.55■■□□□ 1.68
DDR1-235ENST00000428153 SAFB2Q14151 953 aaKnown RBP eCLIP25.53■■□□□ 1.68
DDR1-235ENST00000428153 DCAF11Q8TEB1 546 aa25.52■■□□□ 1.68
DDR1-235ENST00000428153 CCDC125Q86Z20 511 aa25.5■■□□□ 1.67
DDR1-235ENST00000428153 TRAK1Q9UPV9 953 aa25.5■■□□□ 1.67
DDR1-235ENST00000428153 HAP1P54257 671 aaPredicted RBP25.48■■□□□ 1.67
DDR1-235ENST00000428153 NWD2Q9ULI1 1742 aa25.48■■□□□ 1.67
DDR1-235ENST00000428153 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
DDR1-235ENST00000428153 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
DDR1-235ENST00000428153 KDM2AQ9Y2K7 1162 aa25.47■■□□□ 1.67
DDR1-235ENST00000428153 GLI3P10071 1580 aa25.46■■□□□ 1.67
DDR1-235ENST00000428153 ABCA3Q99758 1704 aa25.46■■□□□ 1.67
DDR1-235ENST00000428153 WASLO00401 505 aaPredicted RBP25.45■■□□□ 1.66
DDR1-235ENST00000428153 SRCAPQ6ZRS2 3230 aa25.44■■□□□ 1.66
DDR1-235ENST00000428153 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
DDR1-235ENST00000428153 PMFBP1Q8TBY8 1022 aa25.44■■□□□ 1.66
DDR1-235ENST00000428153 TRPM3Q9HCF6 1732 aaPredicted RBP25.43■■□□□ 1.66
DDR1-235ENST00000428153 VPS72Q15906 364 aa25.43■■□□□ 1.66
DDR1-235ENST00000428153 MINK1Q8N4C8 1332 aaPredicted RBP25.42■■□□□ 1.66
DDR1-235ENST00000428153 HIRIP3Q9BW71 556 aaPredicted RBP25.42■■□□□ 1.66
DDR1-235ENST00000428153 PRR36Q9H6K5 1346 aa25.41■■□□□ 1.66
DDR1-235ENST00000428153 LMOD2Q6P5Q4 547 aa25.41■■□□□ 1.66
DDR1-235ENST00000428153 CABLES1Q8TDN4 633 aa25.41■■□□□ 1.66
DDR1-235ENST00000428153 PLCH1Q4KWH8 1693 aa25.41■■□□□ 1.66
DDR1-235ENST00000428153 ALS2Q96Q42 1657 aa25.4■■□□□ 1.66
DDR1-235ENST00000428153 ONECUT3O60422 494 aaPredicted RBP25.4■■□□□ 1.66
DDR1-235ENST00000428153 ARHGEF28Q8N1W1 1705 aaKnown RBP25.4■■□□□ 1.66
DDR1-235ENST00000428153 KIAA1210Q9ULL0 1709 aa25.37■■□□□ 1.65
DDR1-235ENST00000428153 ITSN1Q15811 1721 aa25.37■■□□□ 1.65
DDR1-235ENST00000428153 FAM83GA6ND36 823 aa25.35■■□□□ 1.65
DDR1-235ENST00000428153 ATP7BP35670 1465 aa25.34■■□□□ 1.65
DDR1-235ENST00000428153 SEPT12Q8IYM1 358 aa25.34■■□□□ 1.65
DDR1-235ENST00000428153 NGDNQ8NEJ9 315 aaKnown RBP25.34■■□□□ 1.65
DDR1-235ENST00000428153 BLMP54132 1417 aaPredicted RBP25.34■■□□□ 1.65
DDR1-235ENST00000428153 COL14A1Q05707 1796 aaKnown RBP25.32■■□□□ 1.64
DDR1-235ENST00000428153 BRWD3Q6RI45 1802 aa25.32■■□□□ 1.64
DDR1-235ENST00000428153 NRAPQ86VF7 1730 aa25.32■■□□□ 1.64
DDR1-235ENST00000428153 ZRANB1Q9UGI0 708 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms