RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 TET3O43151 1660 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 PRXQ9BXM0 1461 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 RAPGEF2Q9Y4G8 1499 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 PIK3C2BO00750 1634 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 PRDM16Q9HAZ2 1276 aa4.53□□□□□ -1.68
RGPD1-203ENST00000428128 ZNF777Q9ULD5 760 aaPredicted RBP4.52□□□□□ -1.69
RGPD1-203ENST00000428128 LMTK2Q8IWU2 1503 aa4.52□□□□□ -1.69
RGPD1-203ENST00000428128 TMED8Q6PL24 325 aaPredicted RBP4.52□□□□□ -1.69
RGPD1-203ENST00000428128 AHDC1Q5TGY3 1603 aaPredicted RBP4.52□□□□□ -1.69
RGPD1-203ENST00000428128 CD109Q6YHK3 1445 aa4.52□□□□□ -1.69
RGPD1-203ENST00000428128 CNTLNQ9NXG0 1405 aa4.52□□□□□ -1.69
RGPD1-203ENST00000428128 NCLP19338 710 aaKnown RBP4.52□□□□□ -1.69
RGPD1-203ENST00000428128 MCCD1P59942 119 aaPredicted RBP4.52□□□□□ -1.69
RGPD1-203ENST00000428128 SH3D19Q5HYK7 790 aa4.52□□□□□ -1.69
RGPD1-203ENST00000428128 GPIHBP1Q8IV16 184 aa4.52□□□□□ -1.69
RGPD1-203ENST00000428128 ZNF592Q92610 1267 aa4.52□□□□□ -1.69
RGPD1-203ENST00000428128 PRG4Q92954 1404 aaPredicted RBP4.51□□□□□ -1.69
RGPD1-203ENST00000428128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.51□□□□□ -1.69
RGPD1-203ENST00000428128 DNAJC14Q6Y2X3 702 aaPredicted RBP4.51□□□□□ -1.69
RGPD1-203ENST00000428128 SIRT1Q96EB6 747 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 UBR1Q8IWV7 1749 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 MINK1Q8N4C8 1332 aaPredicted RBP4.51□□□□□ -1.69
RGPD1-203ENST00000428128 UNC13BO14795 1591 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 IQGAP1P46940 1657 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.51□□□□□ -1.69
RGPD1-203ENST00000428128 PSMD1Q99460 953 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 RIPOR2Q9Y4F9 1068 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 SLIT1O75093 1534 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 EFCAB6Q5THR3 1501 aa4.51□□□□□ -1.69
RGPD1-203ENST00000428128 SREK1Q8WXA9 508 aaKnown RBP4.51□□□□□ -1.69
RGPD1-203ENST00000428128 USP54Q70EL1 1684 aa4.5□□□□□ -1.69
RGPD1-203ENST00000428128 TMUB1Q9BVT8 246 aa4.5□□□□□ -1.69
RGPD1-203ENST00000428128 BANK1Q8NDB2 785 aa4.5□□□□□ -1.69
RGPD1-203ENST00000428128 POM121Q96HA1 1249 aa4.5□□□□□ -1.69
RGPD1-203ENST00000428128 COG6Q9Y2V7 657 aa4.5□□□□□ -1.69
RGPD1-203ENST00000428128 NCOA1Q15788 1441 aa4.5□□□□□ -1.69
RGPD1-203ENST00000428128 DNMT1P26358 1616 aaKnown RBP4.5□□□□□ -1.69
RGPD1-203ENST00000428128 LOC102724159A0A0B4J2E5 919 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 MAFGO15525 162 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 PWP2Q15269 919 aaKnown RBP4.49□□□□□ -1.69
RGPD1-203ENST00000428128 BCL11BQ9C0K0 894 aaPredicted RBP4.49□□□□□ -1.69
RGPD1-203ENST00000428128 BCL11AQ9H165 835 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 ATP10BO94823 1461 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 KNDC1Q76NI1 1749 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 CRYBG1Q9Y4K1 1723 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 SPDYE2BA6NHP3 402 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 SPDYE5A6NIY4 337 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 SPDYE6P0CI01 402 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 TSR1Q2NL82 804 aaKnown RBP4.49□□□□□ -1.69
RGPD1-203ENST00000428128 SPDYE2Q495Y8 402 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 MIER1Q8N108 512 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 NCOA3Q9Y6Q9 1424 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 RREB1Q92766 1687 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 NEXMIFQ5QGS0 1516 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 ABCB7O75027 752 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 PARP9Q8IXQ6 854 aa4.49□□□□□ -1.69
RGPD1-203ENST00000428128 NEFLP07196 543 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 CHD2O14647 1828 aaKnown RBP4.48□□□□□ -1.69
RGPD1-203ENST00000428128 LRRC9Q6ZRR7 1453 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 PITPNM1O00562 1244 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 TEX2Q8IWB9 1127 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 EXOC8Q8IYI6 725 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 ATP7AQ04656 1500 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 LRP6O75581 1613 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 PPM1GO15355 546 aaPredicted RBP4.48□□□□□ -1.69
RGPD1-203ENST00000428128 CERKQ8TCT0 537 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 UBXN4Q92575 508 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 BRINP2Q9C0B6 783 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 WNK3Q9BYP7 1800 aa4.48□□□□□ -1.69
RGPD1-203ENST00000428128 C9orf84Q5VXU9 1444 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 FGD6Q6ZV73 1430 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 ACIN1Q9UKV3 1341 aaKnown RBP4.47□□□□□ -1.69
RGPD1-203ENST00000428128 FGD1P98174 961 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 RBM26Q5T8P6 1007 aaKnown RBP4.47□□□□□ -1.69
RGPD1-203ENST00000428128 PCMTD1Q96MG8 357 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-203ENST00000428128 HIRIP3Q9BW71 556 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-203ENST00000428128 SUGT1Q9Y2Z0 365 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 GPATCH8Q9UKJ3 1502 aaKnown RBP4.47□□□□□ -1.69
RGPD1-203ENST00000428128 GCC2Q8IWJ2 1684 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 POGZQ7Z3K3 1410 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 HAX1O00165 279 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 PBXIP1Q96AQ6 731 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 CARMIL2Q6F5E8 1435 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 ARHGAP23Q9P227 1491 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 SETQ01105 290 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-203ENST00000428128 MAP2K5Q13163 448 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 IFFO2Q5TF58 517 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 STK24Q9Y6E0 443 aa4.47□□□□□ -1.69
RGPD1-203ENST00000428128 TIAM1Q13009 1591 aa4.46□□□□□ -1.69
RGPD1-203ENST00000428128 SAMD9LQ8IVG5 1584 aa4.46□□□□□ -1.69
RGPD1-203ENST00000428128 MAP3K1Q13233 1512 aa4.46□□□□□ -1.69
RGPD1-203ENST00000428128 NCKAP5LQ9HCH0 1330 aa4.46□□□□□ -1.7
RGPD1-203ENST00000428128 GABBR2O75899 941 aa4.46□□□□□ -1.7
RGPD1-203ENST00000428128 NOM1Q5C9Z4 860 aaKnown RBP4.46□□□□□ -1.7
RGPD1-203ENST00000428128 FAM9AQ8IZU1 332 aaPredicted RBP4.46□□□□□ -1.7
RGPD1-203ENST00000428128 TMEM88BA6NKF7 163 aa4.46□□□□□ -1.7
RGPD1-203ENST00000428128 CCDC181Q5TID7 509 aa4.45□□□□□ -1.7
RGPD1-203ENST00000428128 KRI1Q8N9T8 703 aaKnown RBP4.45□□□□□ -1.7
RGPD1-203ENST00000428128 XRN1Q8IZH2 1706 aaKnown RBP4.45□□□□□ -1.7
RGPD1-203ENST00000428128 PRDM15P57071 1507 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms