RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 NUTM2AQ8IVF1 878 aaPredicted RBP28.07■■■□□ 2.08
AL954642.1-201ENST00000428088 C14orf93Q9H972 538 aaKnown RBP28.07■■■□□ 2.08
AL954642.1-201ENST00000428088 KNDC1Q76NI1 1749 aa28.06■■■□□ 2.08
AL954642.1-201ENST00000428088 CFAP70Q5T0N1 1121 aa28.06■■■□□ 2.08
AL954642.1-201ENST00000428088 YTHDC2Q9H6S0 1430 aaKnown RBP28.06■■■□□ 2.08
AL954642.1-201ENST00000428088 NRXN1Q9ULB1 1477 aa28.06■■■□□ 2.08
AL954642.1-201ENST00000428088 MYOM2P54296 1465 aa28.05■■■□□ 2.08
AL954642.1-201ENST00000428088 PLEKHH1Q9ULM0 1364 aa28.05■■■□□ 2.08
AL954642.1-201ENST00000428088 CDC42BPGQ6DT37 1551 aa28.03■■■□□ 2.08
AL954642.1-201ENST00000428088 LAMC1P11047 1609 aa28.01■■■□□ 2.07
AL954642.1-201ENST00000428088 ESCO1Q5FWF5 840 aa28■■■□□ 2.07
AL954642.1-201ENST00000428088 PNPLA6Q8IY17 1366 aa27.99■■■□□ 2.07
AL954642.1-201ENST00000428088 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
AL954642.1-201ENST00000428088 DHX57Q6P158 1386 aaKnown RBP27.99■■■□□ 2.07
AL954642.1-201ENST00000428088 SOS2Q07890 1332 aaPredicted RBP27.98■■■□□ 2.07
AL954642.1-201ENST00000428088 KDM2AQ9Y2K7 1162 aa27.98■■■□□ 2.07
AL954642.1-201ENST00000428088 ZNF772Q68DY9 489 aaPredicted RBP27.96■■■□□ 2.07
AL954642.1-201ENST00000428088 SIRT1Q96EB6 747 aa27.96■■■□□ 2.07
AL954642.1-201ENST00000428088 DCAF11Q8TEB1 546 aa27.95■■■□□ 2.06
AL954642.1-201ENST00000428088 FMN2Q9NZ56 1722 aa27.92■■■□□ 2.06
AL954642.1-201ENST00000428088 FOXO3O43524 673 aa27.91■■■□□ 2.06
AL954642.1-201ENST00000428088 SAFB2Q14151 953 aaKnown RBP eCLIP27.91■■■□□ 2.06
AL954642.1-201ENST00000428088 NPHP3Q7Z494 1330 aa27.91■■■□□ 2.06
AL954642.1-201ENST00000428088 PRAM1Q96QH2 718 aa27.9■■■□□ 2.06
AL954642.1-201ENST00000428088 AFF2P51816 1311 aa27.9■■■□□ 2.06
AL954642.1-201ENST00000428088 XPCQ01831 940 aaPredicted RBP27.89■■■□□ 2.06
AL954642.1-201ENST00000428088 C8orf37Q96NL8 207 aa27.89■■■□□ 2.06
AL954642.1-201ENST00000428088 ADGRB1O14514 1584 aa27.87■■■□□ 2.05
AL954642.1-201ENST00000428088 ADAMTS2O95450 1211 aa27.87■■■□□ 2.05
AL954642.1-201ENST00000428088 RGPD8O14715 1765 aaPredicted RBP27.86■■■□□ 2.05
AL954642.1-201ENST00000428088 POGKQ9P215 609 aa27.86■■■□□ 2.05
AL954642.1-201ENST00000428088 PXDNQ92626 1479 aa27.86■■■□□ 2.05
AL954642.1-201ENST00000428088 TRAK1Q9UPV9 953 aa27.85■■■□□ 2.05
AL954642.1-201ENST00000428088 DLC1Q96QB1 1528 aa27.85■■■□□ 2.05
AL954642.1-201ENST00000428088 STAC3Q96MF2 364 aa27.84■■■□□ 2.05
AL954642.1-201ENST00000428088 RXRBP28702 533 aa27.82■■■□□ 2.04
AL954642.1-201ENST00000428088 COL22A1Q8NFW1 1626 aaPredicted RBP27.81■■■□□ 2.04
AL954642.1-201ENST00000428088 NGLY1Q96IV0 654 aa27.81■■■□□ 2.04
AL954642.1-201ENST00000428088 KIF1AQ12756 1690 aa27.8■■■□□ 2.04
AL954642.1-201ENST00000428088 QTRT2Q9H974 415 aaKnown RBP27.78■■■□□ 2.04
AL954642.1-201ENST00000428088 HIRIP3Q9BW71 556 aaPredicted RBP27.77■■■□□ 2.04
AL954642.1-201ENST00000428088 PHF8Q9UPP1 1060 aa27.77■■■□□ 2.04
AL954642.1-201ENST00000428088 KRT28Q7Z3Y7 464 aa27.76■■■□□ 2.03
AL954642.1-201ENST00000428088 MINK1Q8N4C8 1332 aaPredicted RBP27.74■■■□□ 2.03
AL954642.1-201ENST00000428088 ADGRB2O60241 1585 aa27.73■■■□□ 2.03
AL954642.1-201ENST00000428088 SPATA31A3Q5VYP0 1347 aa27.72■■■□□ 2.03
AL954642.1-201ENST00000428088 USP32Q8NFA0 1604 aa27.72■■■□□ 2.03
AL954642.1-201ENST00000428088 USP21Q9UK80 565 aa27.71■■■□□ 2.03
AL954642.1-201ENST00000428088 RBM6P78332 1123 aaKnown RBP27.7■■■□□ 2.02
AL954642.1-201ENST00000428088 PMFBP1Q8TBY8 1022 aa27.7■■■□□ 2.02
AL954642.1-201ENST00000428088 ARHGEF28Q8N1W1 1705 aaKnown RBP27.69■■■□□ 2.02
AL954642.1-201ENST00000428088 MARF1Q9Y4F3 1742 aaKnown RBP27.69■■■□□ 2.02
AL954642.1-201ENST00000428088 CDK12Q9NYV4 1490 aaPredicted RBP27.69■■■□□ 2.02
AL954642.1-201ENST00000428088 ANKARQ7Z5J8 1434 aa27.68■■■□□ 2.02
AL954642.1-201ENST00000428088 PSME1Q06323 249 aa27.68■■■□□ 2.02
AL954642.1-201ENST00000428088 FNBP4Q8N3X1 1017 aaPredicted RBP27.68■■■□□ 2.02
AL954642.1-201ENST00000428088 WASLO00401 505 aaPredicted RBP27.67■■■□□ 2.02
AL954642.1-201ENST00000428088 PRR36Q9H6K5 1346 aa27.65■■■□□ 2.02
AL954642.1-201ENST00000428088 KIAA1210Q9ULL0 1709 aa27.64■■■□□ 2.02
AL954642.1-201ENST00000428088 TRPC5Q9UL62 973 aaPredicted RBP27.64■■■□□ 2.02
AL954642.1-201ENST00000428088 TNS3Q68CZ2 1445 aa27.64■■■□□ 2.02
AL954642.1-201ENST00000428088 LMOD2Q6P5Q4 547 aa27.63■■■□□ 2.01
AL954642.1-201ENST00000428088 RGS12O14924 1447 aa27.63■■■□□ 2.01
AL954642.1-201ENST00000428088 TULP4Q9NRJ4 1543 aa27.62■■■□□ 2.01
AL954642.1-201ENST00000428088 PLEKHG5O94827 1062 aa27.62■■■□□ 2.01
AL954642.1-201ENST00000428088 NBPF1Q3BBV0 1214 aa27.62■■■□□ 2.01
AL954642.1-201ENST00000428088 SBNO1A3KN83 1393 aa27.61■■■□□ 2.01
AL954642.1-201ENST00000428088 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
AL954642.1-201ENST00000428088 UPF1Q92900 1129 aaKnown RBP eCLIP27.61■■■□□ 2.01
AL954642.1-201ENST00000428088 CABLES1Q8TDN4 633 aa27.6■■■□□ 2.01
AL954642.1-201ENST00000428088 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
AL954642.1-201ENST00000428088 BCL9LQ86UU0 1499 aa27.59■■■□□ 2.01
AL954642.1-201ENST00000428088 ATRNO75882 1429 aa27.58■■■□□ 2.01
AL954642.1-201ENST00000428088 HAP1P54257 671 aaPredicted RBP27.58■■■□□ 2.01
AL954642.1-201ENST00000428088 L3MBTL2Q969R5 705 aa27.57■■■□□ 2
AL954642.1-201ENST00000428088 ARHGEF10O15013 1369 aa27.55■■■□□ 2
AL954642.1-201ENST00000428088 TRPM3Q9HCF6 1732 aaPredicted RBP27.55■■■□□ 2
AL954642.1-201ENST00000428088 NEUROD1Q13562 356 aa27.54■■■□□ 2
AL954642.1-201ENST00000428088 GPRASP1Q5JY77 1395 aa27.54■■■□□ 2
AL954642.1-201ENST00000428088 NGDNQ8NEJ9 315 aaKnown RBP27.54■■■□□ 2
AL954642.1-201ENST00000428088 NUDT16Q96DE0 195 aaKnown RBP27.54■■■□□ 2
AL954642.1-201ENST00000428088 CDK19Q9BWU1 502 aa27.54■■■□□ 2
AL954642.1-201ENST00000428088 ITSN1Q15811 1721 aa27.52■■■□□ 2
AL954642.1-201ENST00000428088 ABCA3Q99758 1704 aa27.52■■■□□ 2
AL954642.1-201ENST00000428088 ATP7BP35670 1465 aa27.51■■■□□ 2
AL954642.1-201ENST00000428088 SLIT2O94813 1529 aa27.51■■□□□ 1.99
AL954642.1-201ENST00000428088 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
AL954642.1-201ENST00000428088 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
AL954642.1-201ENST00000428088 ALS2Q96Q42 1657 aa27.49■■□□□ 1.99
AL954642.1-201ENST00000428088 GJD4Q96KN9 370 aaPredicted RBP27.49■■□□□ 1.99
AL954642.1-201ENST00000428088 PAK3O75914 559 aaPredicted RBP27.48■■□□□ 1.99
AL954642.1-201ENST00000428088 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.99
AL954642.1-201ENST00000428088 PLCH1Q4KWH8 1693 aa27.44■■□□□ 1.98
AL954642.1-201ENST00000428088 CCDC61Q9Y6R9 512 aa27.44■■□□□ 1.98
AL954642.1-201ENST00000428088 FAM83GA6ND36 823 aa27.43■■□□□ 1.98
AL954642.1-201ENST00000428088 TOPAZ1Q8N9V7 1692 aa27.42■■□□□ 1.98
AL954642.1-201ENST00000428088 TRPM1Q7Z4N2 1603 aa27.41■■□□□ 1.98
AL954642.1-201ENST00000428088 NWD2Q9ULI1 1742 aa27.41■■□□□ 1.98
AL954642.1-201ENST00000428088 GLI3P10071 1580 aa27.41■■□□□ 1.98
AL954642.1-201ENST00000428088 RALGAPBQ86X10 1494 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms