RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 ADGRL3Q9HAR2 1447 aa21.37■■□□□ 1.01
VARS2-203ENST00000428017 USP47Q96K76 1375 aa21.35■■□□□ 1.01
VARS2-203ENST00000428017 MINK1Q8N4C8 1332 aaPredicted RBP21.34■■□□□ 1.01
VARS2-203ENST00000428017 CADPS2Q86UW7 1296 aa21.34■■□□□ 1.01
VARS2-203ENST00000428017 UBAP1LF5GYI3 381 aa21.32■■□□□ 1
VARS2-203ENST00000428017 TOM1O60784 492 aa21.32■■□□□ 1
VARS2-203ENST00000428017 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
VARS2-203ENST00000428017 ARHGEF28Q8N1W1 1705 aaKnown RBP21.32■■□□□ 1
VARS2-203ENST00000428017 DCCP43146 1447 aa21.31■■□□□ 1
VARS2-203ENST00000428017 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
VARS2-203ENST00000428017 ST20-MTHFSA0A0A6YYL1 179 aa21.29■■□□□ 1
VARS2-203ENST00000428017 NALCNQ8IZF0 1738 aa21.27■■□□□ 1
VARS2-203ENST00000428017 SLC24A1O60721 1099 aa21.27■■□□□ 1
VARS2-203ENST00000428017 XIRP1Q702N8 1843 aaKnown RBP21.27■□□□□ 0.99
VARS2-203ENST00000428017 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
VARS2-203ENST00000428017 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
VARS2-203ENST00000428017 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
VARS2-203ENST00000428017 CDC42BPGQ6DT37 1551 aa21.25■□□□□ 0.99
VARS2-203ENST00000428017 SLAIN2Q9P270 581 aa21.25■□□□□ 0.99
VARS2-203ENST00000428017 EVC2Q86UK5 1308 aa21.25■□□□□ 0.99
VARS2-203ENST00000428017 NUTM2FA1L443 756 aa21.24■□□□□ 0.99
VARS2-203ENST00000428017 SRPK2P78362 688 aaKnown RBP21.24■□□□□ 0.99
VARS2-203ENST00000428017 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
VARS2-203ENST00000428017 PIP4K2BP78356 416 aa21.23■□□□□ 0.99
VARS2-203ENST00000428017 CDK19Q9BWU1 502 aa21.23■□□□□ 0.99
VARS2-203ENST00000428017 QRICH2Q9H0J4 1663 aa21.23■□□□□ 0.99
VARS2-203ENST00000428017 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
VARS2-203ENST00000428017 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
VARS2-203ENST00000428017 MST1RQ04912 1400 aa21.21■□□□□ 0.99
VARS2-203ENST00000428017 TMF1P82094 1093 aa21.2■□□□□ 0.98
VARS2-203ENST00000428017 TESK2Q96S53 571 aa21.19■□□□□ 0.98
VARS2-203ENST00000428017 ESCO1Q5FWF5 840 aa21.18■□□□□ 0.98
VARS2-203ENST00000428017 CABP2Q9NPB3 220 aa21.18■□□□□ 0.98
VARS2-203ENST00000428017 ANKARQ7Z5J8 1434 aa21.18■□□□□ 0.98
VARS2-203ENST00000428017 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
VARS2-203ENST00000428017 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
VARS2-203ENST00000428017 FBXO41Q8TF61 875 aa21.16■□□□□ 0.98
VARS2-203ENST00000428017 NUDT16Q96DE0 195 aaKnown RBP21.16■□□□□ 0.98
VARS2-203ENST00000428017 TULP4Q9NRJ4 1543 aa21.15■□□□□ 0.98
VARS2-203ENST00000428017 FMN2Q9NZ56 1722 aa21.15■□□□□ 0.98
VARS2-203ENST00000428017 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
VARS2-203ENST00000428017 ORAI2Q96SN7 254 aa21.13■□□□□ 0.97
VARS2-203ENST00000428017 CCDC61Q9Y6R9 512 aa21.13■□□□□ 0.97
VARS2-203ENST00000428017 ATAD2Q6PL18 1390 aa21.12■□□□□ 0.97
VARS2-203ENST00000428017 PRR36Q9H6K5 1346 aa21.12■□□□□ 0.97
VARS2-203ENST00000428017 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
VARS2-203ENST00000428017 DISP3Q9P2K9 1392 aa21.1■□□□□ 0.97
VARS2-203ENST00000428017 ATP7BP35670 1465 aa21.1■□□□□ 0.97
VARS2-203ENST00000428017 PUS7Q96PZ0 661 aaKnown RBP21.1■□□□□ 0.97
VARS2-203ENST00000428017 POLR3GLQ9BT43 218 aa21.09■□□□□ 0.97
VARS2-203ENST00000428017 NGDNQ8NEJ9 315 aaKnown RBP21.08■□□□□ 0.97
VARS2-203ENST00000428017 PMFBP1Q8TBY8 1022 aa21.08■□□□□ 0.97
VARS2-203ENST00000428017 PPIP5K1Q6PFW1 1433 aa21.07■□□□□ 0.96
VARS2-203ENST00000428017 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
VARS2-203ENST00000428017 NPHP3Q7Z494 1330 aa21.06■□□□□ 0.96
VARS2-203ENST00000428017 ROBO1Q9Y6N7 1651 aa21.06■□□□□ 0.96
VARS2-203ENST00000428017 FOXO3O43524 673 aa21.06■□□□□ 0.96
VARS2-203ENST00000428017 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
VARS2-203ENST00000428017 USP32Q8NFA0 1604 aa21.05■□□□□ 0.96
VARS2-203ENST00000428017 PLEKHG3A1L390 1219 aa21.04■□□□□ 0.96
VARS2-203ENST00000428017 PSME1Q06323 249 aa21.04■□□□□ 0.96
VARS2-203ENST00000428017 KIF1AQ12756 1690 aa21.02■□□□□ 0.96
VARS2-203ENST00000428017 ACEP12821 1306 aa21.02■□□□□ 0.95
VARS2-203ENST00000428017 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
VARS2-203ENST00000428017 NINLQ9Y2I6 1382 aa21.01■□□□□ 0.95
VARS2-203ENST00000428017 DDX17Q92841 729 aaKnown RBP21.01■□□□□ 0.95
VARS2-203ENST00000428017 XPCQ01831 940 aaPredicted RBP21■□□□□ 0.95
VARS2-203ENST00000428017 HDGFL2Q7Z4V5 671 aaPredicted RBP21■□□□□ 0.95
VARS2-203ENST00000428017 TERF2IPQ9NYB0 399 aa21■□□□□ 0.95
VARS2-203ENST00000428017 HSPA1LP34931 641 aa20.99■□□□□ 0.95
VARS2-203ENST00000428017 KRT28Q7Z3Y7 464 aa20.99■□□□□ 0.95
VARS2-203ENST00000428017 SLC12A5Q9H2X9 1139 aa20.99■□□□□ 0.95
VARS2-203ENST00000428017 POLR3AO14802 1390 aaPredicted RBP20.98■□□□□ 0.95
VARS2-203ENST00000428017 C11orf95C9JLR9 678 aaPredicted RBP20.98■□□□□ 0.95
VARS2-203ENST00000428017 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
VARS2-203ENST00000428017 TOPAZ1Q8N9V7 1692 aa20.98■□□□□ 0.95
VARS2-203ENST00000428017 AHDC1Q5TGY3 1603 aaPredicted RBP20.97■□□□□ 0.95
VARS2-203ENST00000428017 KIF7Q2M1P5 1343 aa20.97■□□□□ 0.95
VARS2-203ENST00000428017 RGPD8O14715 1765 aaPredicted RBP20.97■□□□□ 0.95
VARS2-203ENST00000428017 LRRC59Q96AG4 307 aaKnown RBP20.96■□□□□ 0.95
VARS2-203ENST00000428017 SOS2Q07890 1332 aaPredicted RBP20.96■□□□□ 0.95
VARS2-203ENST00000428017 PAK3O75914 559 aaPredicted RBP20.95■□□□□ 0.94
VARS2-203ENST00000428017 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
VARS2-203ENST00000428017 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
VARS2-203ENST00000428017 LMOD2Q6P5Q4 547 aa20.93■□□□□ 0.94
VARS2-203ENST00000428017 ILDR1Q86SU0 546 aaPredicted RBP20.93■□□□□ 0.94
VARS2-203ENST00000428017 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
VARS2-203ENST00000428017 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
VARS2-203ENST00000428017 WASHC2AQ641Q2 1341 aa20.92■□□□□ 0.94
VARS2-203ENST00000428017 PXDNQ92626 1479 aa20.92■□□□□ 0.94
VARS2-203ENST00000428017 SBNO1A3KN83 1393 aa20.91■□□□□ 0.94
VARS2-203ENST00000428017 BRD4O60885 1362 aaPredicted RBP20.91■□□□□ 0.94
VARS2-203ENST00000428017 CPSF1Q10570 1443 aaKnown RBP20.91■□□□□ 0.94
VARS2-203ENST00000428017 ANKRD36BQ8N2N9 1353 aa20.91■□□□□ 0.94
VARS2-203ENST00000428017 USP6P35125 1406 aa20.9■□□□□ 0.94
VARS2-203ENST00000428017 A0A1W2PP64 1363 aa20.9■□□□□ 0.94
VARS2-203ENST00000428017 SPATA31A3Q5VYP0 1347 aa20.89■□□□□ 0.93
VARS2-203ENST00000428017 TNS3Q68CZ2 1445 aa20.88■□□□□ 0.93
VARS2-203ENST00000428017 JCADQ9P266 1359 aa20.88■□□□□ 0.93
VARS2-203ENST00000428017 COL16A1Q07092 1604 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms