RNA–Protein interactions for RNA: ENST00000427841.5

SDHAP1-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 2

Gene SDHAP1, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-205ENST00000427841 STAG3Q9UJ98 1225 aa22.28■■□□□ 1.16
SDHAP1-205ENST00000427841 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.16
SDHAP1-205ENST00000427841 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
SDHAP1-205ENST00000427841 POLR3AO14802 1390 aaPredicted RBP22.25■■□□□ 1.15
SDHAP1-205ENST00000427841 PTPRMP28827 1452 aa22.24■■□□□ 1.15
SDHAP1-205ENST00000427841 APAF1O14727 1248 aa22.24■■□□□ 1.15
SDHAP1-205ENST00000427841 DUSP27Q5VZP5 1158 aa22.24■■□□□ 1.15
SDHAP1-205ENST00000427841 USP32Q8NFA0 1604 aa22.24■■□□□ 1.15
SDHAP1-205ENST00000427841 YTHDC2Q9H6S0 1430 aaKnown RBP22.24■■□□□ 1.15
SDHAP1-205ENST00000427841 PLIN1O60240 522 aa22.23■■□□□ 1.15
SDHAP1-205ENST00000427841 ANKRD36BQ8N2N9 1353 aa22.23■■□□□ 1.15
SDHAP1-205ENST00000427841 GOLGA2Q08379 1002 aa22.23■■□□□ 1.15
SDHAP1-205ENST00000427841 CGNL1Q0VF96 1302 aa22.23■■□□□ 1.15
SDHAP1-205ENST00000427841 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
SDHAP1-205ENST00000427841 PRAM1Q96QH2 718 aa22.22■■□□□ 1.15
SDHAP1-205ENST00000427841 SPATA31D1Q6ZQQ2 1576 aa22.22■■□□□ 1.15
SDHAP1-205ENST00000427841 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
SDHAP1-205ENST00000427841 A2ML1A8K2U0 1454 aa22.2■■□□□ 1.14
SDHAP1-205ENST00000427841 ARHGEF40Q8TER5 1519 aa22.2■■□□□ 1.14
SDHAP1-205ENST00000427841 SRPK2P78362 688 aaKnown RBP22.2■■□□□ 1.14
SDHAP1-205ENST00000427841 SLFN5Q08AF3 891 aa22.19■■□□□ 1.14
SDHAP1-205ENST00000427841 POGKQ9P215 609 aa22.19■■□□□ 1.14
SDHAP1-205ENST00000427841 SHPRHQ149N8 1683 aa22.18■■□□□ 1.14
SDHAP1-205ENST00000427841 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
SDHAP1-205ENST00000427841 MTHFSP49914 203 aa22.16■■□□□ 1.14
SDHAP1-205ENST00000427841 A0A1W2PP64 1363 aa22.16■■□□□ 1.14
SDHAP1-205ENST00000427841 RIMS2Q9UQ26 1411 aa22.15■■□□□ 1.14
SDHAP1-205ENST00000427841 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
SDHAP1-205ENST00000427841 NSD2O96028 1365 aa22.13■■□□□ 1.13
SDHAP1-205ENST00000427841 NINLQ9Y2I6 1382 aa22.13■■□□□ 1.13
SDHAP1-205ENST00000427841 ZMYM3Q14202 1370 aa22.13■■□□□ 1.13
SDHAP1-205ENST00000427841 DMRT2Q9Y5R5 561 aa22.13■■□□□ 1.13
SDHAP1-205ENST00000427841 CRBNQ96SW2 442 aa22.12■■□□□ 1.13
SDHAP1-205ENST00000427841 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
SDHAP1-205ENST00000427841 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
SDHAP1-205ENST00000427841 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
SDHAP1-205ENST00000427841 CDK19Q9BWU1 502 aa22.11■■□□□ 1.13
SDHAP1-205ENST00000427841 ESF1Q9H501 851 aaKnown RBP22.1■■□□□ 1.13
SDHAP1-205ENST00000427841 CD163L1Q9NR16 1453 aa22.1■■□□□ 1.13
SDHAP1-205ENST00000427841 SETD1AO15047 1707 aaKnown RBP22.1■■□□□ 1.13
SDHAP1-205ENST00000427841 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
SDHAP1-205ENST00000427841 NGEFQ8N5V2 710 aa22.09■■□□□ 1.13
SDHAP1-205ENST00000427841 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
SDHAP1-205ENST00000427841 E9PSI1 815 aa22.07■■□□□ 1.12
SDHAP1-205ENST00000427841 CFAP53Q96M91 514 aa22.07■■□□□ 1.12
SDHAP1-205ENST00000427841 FANCIQ9NVI1 1328 aa22.07■■□□□ 1.12
SDHAP1-205ENST00000427841 WWC1Q8IX03 1113 aa22.07■■□□□ 1.12
SDHAP1-205ENST00000427841 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
SDHAP1-205ENST00000427841 TERF2IPQ9NYB0 399 aa22.07■■□□□ 1.12
SDHAP1-205ENST00000427841 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
SDHAP1-205ENST00000427841 RRP7AQ9Y3A4 280 aaKnown RBP22.05■■□□□ 1.12
SDHAP1-205ENST00000427841 NRXN3Q9Y4C0 1643 aa22.05■■□□□ 1.12
SDHAP1-205ENST00000427841 FYB1O15117 783 aa22.05■■□□□ 1.12
SDHAP1-205ENST00000427841 NEUROD2Q15784 382 aa22.05■■□□□ 1.12
SDHAP1-205ENST00000427841 CABP1Q9NZU7 370 aa22.05■■□□□ 1.12
SDHAP1-205ENST00000427841 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
SDHAP1-205ENST00000427841 TCP11L2Q8N4U5 519 aa22.04■■□□□ 1.12
SDHAP1-205ENST00000427841 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
SDHAP1-205ENST00000427841 MSH5O43196 834 aa22.03■■□□□ 1.12
SDHAP1-205ENST00000427841 METP08581 1390 aa22.02■■□□□ 1.12
SDHAP1-205ENST00000427841 NLRP1Q9C000 1473 aa22.02■■□□□ 1.11
SDHAP1-205ENST00000427841 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.01■■□□□ 1.11
SDHAP1-205ENST00000427841 HDGFL2Q7Z4V5 671 aaPredicted RBP22.01■■□□□ 1.11
SDHAP1-205ENST00000427841 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
SDHAP1-205ENST00000427841 TNRQ92752 1358 aa22■■□□□ 1.11
SDHAP1-205ENST00000427841 U2AF1L5P0DN76 240 aaPredicted RBP22■■□□□ 1.11
SDHAP1-205ENST00000427841 U2AF1Q01081 240 aaKnown RBP eCLIP22■■□□□ 1.113e-7■□□□□ 9.6
SDHAP1-205ENST00000427841 BCAR3O75815 825 aa21.99■■□□□ 1.11
SDHAP1-205ENST00000427841 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
SDHAP1-205ENST00000427841 PHF23Q9BUL5 403 aaPredicted RBP21.99■■□□□ 1.11
SDHAP1-205ENST00000427841 MED14O60244 1454 aa21.98■■□□□ 1.11
SDHAP1-205ENST00000427841 TXNDC2Q86VQ3 553 aa21.97■■□□□ 1.11
SDHAP1-205ENST00000427841 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
SDHAP1-205ENST00000427841 ANP32EQ9BTT0 268 aa21.94■■□□□ 1.1
SDHAP1-205ENST00000427841 KIF20BQ96Q89 1820 aa21.94■■□□□ 1.1
SDHAP1-205ENST00000427841 UBR1Q8IWV7 1749 aa21.94■■□□□ 1.1
SDHAP1-205ENST00000427841 HDGFP51858 240 aaKnown RBP21.94■■□□□ 1.1
SDHAP1-205ENST00000427841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.1
SDHAP1-205ENST00000427841 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
SDHAP1-205ENST00000427841 CCDC27Q2M243 656 aa21.93■■□□□ 1.1
SDHAP1-205ENST00000427841 TMEM2Q9UHN6 1383 aa21.93■■□□□ 1.1
SDHAP1-205ENST00000427841 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
SDHAP1-205ENST00000427841 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
SDHAP1-205ENST00000427841 ATP7BP35670 1465 aa21.91■■□□□ 1.1
SDHAP1-205ENST00000427841 TCERG1O14776 1098 aaKnown RBP21.91■■□□□ 1.1
SDHAP1-205ENST00000427841 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
SDHAP1-205ENST00000427841 SKAP1Q86WV1 359 aa21.9■■□□□ 1.1
SDHAP1-205ENST00000427841 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
SDHAP1-205ENST00000427841 FBLN1P23142 703 aa21.89■■□□□ 1.1
SDHAP1-205ENST00000427841 KDM2BQ8NHM5 1336 aa21.89■■□□□ 1.09
SDHAP1-205ENST00000427841 CEBPAP49715 358 aaPredicted RBP21.89■■□□□ 1.09
SDHAP1-205ENST00000427841 KNDC1Q76NI1 1749 aa21.89■■□□□ 1.09
SDHAP1-205ENST00000427841 NCBP3Q53F19 620 aaKnown RBP21.88■■□□□ 1.09
SDHAP1-205ENST00000427841 NCKAP5LQ9HCH0 1330 aa21.88■■□□□ 1.09
SDHAP1-205ENST00000427841 TECPR2O15040 1411 aa21.88■■□□□ 1.09
SDHAP1-205ENST00000427841 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
SDHAP1-205ENST00000427841 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
SDHAP1-205ENST00000427841 FAM135BQ49AJ0 1406 aa21.87■■□□□ 1.09
SDHAP1-205ENST00000427841 SIRT1Q96EB6 747 aa21.87■■□□□ 1.09
SDHAP1-205ENST00000427841 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms