RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
NUDCD1-202ENST00000427660 POTEB2H3BUK9 544 aa7.67□□□□□ -1.18
NUDCD1-202ENST00000427660 ATG7O95352 703 aa7.66□□□□□ -1.18
NUDCD1-202ENST00000427660 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
NUDCD1-202ENST00000427660 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
NUDCD1-202ENST00000427660 SMAPO00193 183 aa7.65□□□□□ -1.18
NUDCD1-202ENST00000427660 LRRN4Q8WUT4 740 aa7.65□□□□□ -1.18
NUDCD1-202ENST00000427660 UCN2Q96RP3 112 aa7.65□□□□□ -1.18
NUDCD1-202ENST00000427660 SLC10A3P09131 477 aa7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 PNMA1Q8ND90 353 aa7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 FOXD4L4Q8WXT5 416 aaPredicted RBP7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 TFIP11Q9UBB9 837 aaKnown RBP7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 CFAP99D6REC4 459 aa7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 GUCA2AQ02747 115 aa7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 AMOTL2Q9Y2J4 779 aa7.64□□□□□ -1.19
NUDCD1-202ENST00000427660 SLC4A3P48751 1232 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 PROX2Q3B8N5 592 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 SLF2Q8IX21 1173 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 KCNH8Q96L42 1107 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 RBM25P49756 843 aaKnown RBP7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 PRR7Q8TB68 274 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 TSC1Q92574 1164 aa7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 MAFBQ9Y5Q3 323 aaPredicted RBP7.63□□□□□ -1.19
NUDCD1-202ENST00000427660 TMEM88BA6NKF7 163 aa7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 C6orf229H3BNL8 230 aa7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 CCDC27Q2M243 656 aa7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 SWT1Q5T5J6 900 aaKnown RBP7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 SND1Q7KZF4 910 aaKnown RBP eCLIP7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 HLA-CQ95604 372 aa7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 IVNS1ABPQ9Y6Y0 642 aa7.62□□□□□ -1.19
NUDCD1-202ENST00000427660 B4GALNT3Q6L9W6 998 aa7.61□□□□□ -1.19
NUDCD1-202ENST00000427660 SCUBE2Q9NQ36 999 aa7.61□□□□□ -1.19
NUDCD1-202ENST00000427660 KIAA1468Q9P260 1216 aa7.61□□□□□ -1.19
NUDCD1-202ENST00000427660 HDGFP51858 240 aaKnown RBP7.61□□□□□ -1.19
NUDCD1-202ENST00000427660 MAMSTRQ6ZN01 415 aa7.61□□□□□ -1.19
NUDCD1-202ENST00000427660 EPS8L1Q8TE68 723 aa7.61□□□□□ -1.19
NUDCD1-202ENST00000427660 EIF4G2P78344 907 aaKnown RBP eCLIP7.6□□□□□ -1.19
NUDCD1-202ENST00000427660 ZBED2Q9BTP6 218 aa7.6□□□□□ -1.19
NUDCD1-202ENST00000427660 GNEQ9Y223 722 aaKnown RBP7.6□□□□□ -1.19
NUDCD1-202ENST00000427660 E9PSI1 815 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 POTEJP0CG39 1038 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 OTUD5Q96G74 571 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 ATP9BO43861 1147 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 FUT2Q10981 343 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 ELOAQ14241 798 aaKnown RBP7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 DESI1Q6ICB0 168 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 RABGEF1Q9UJ41 708 aa7.59□□□□□ -1.19
NUDCD1-202ENST00000427660 ATP6V1AP38606 617 aa7.58□□□□□ -1.2
NUDCD1-202ENST00000427660 NR6A1Q15406 480 aa7.58□□□□□ -1.2
NUDCD1-202ENST00000427660 CARNS1A5YM72 827 aa7.58□□□□□ -1.2
NUDCD1-202ENST00000427660 HOXB1P14653 301 aaPredicted RBP7.57□□□□□ -1.2
NUDCD1-202ENST00000427660 TBC1D9Q6ZT07 1266 aa7.57□□□□□ -1.2
NUDCD1-202ENST00000427660 RETREG3Q86VR2 466 aa7.57□□□□□ -1.2
NUDCD1-202ENST00000427660 NFATC2IPQ8NCF5 419 aa7.57□□□□□ -1.2
NUDCD1-202ENST00000427660 ZNF428Q96B54 188 aa7.57□□□□□ -1.2
NUDCD1-202ENST00000427660 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
NUDCD1-202ENST00000427660 NR1H3Q13133 447 aa7.56□□□□□ -1.2
NUDCD1-202ENST00000427660 CFHP08603 1231 aa7.55□□□□□ -1.2
NUDCD1-202ENST00000427660 FAM98CQ17RN3 349 aaKnown RBP7.55□□□□□ -1.2
NUDCD1-202ENST00000427660 SNPHO15079 494 aa7.55□□□□□ -1.2
NUDCD1-202ENST00000427660 CDCA8Q53HL2 280 aa7.55□□□□□ -1.2
NUDCD1-202ENST00000427660 KANK4Q5T7N3 995 aaPredicted RBP7.55□□□□□ -1.2
NUDCD1-202ENST00000427660 PER1O15534 1290 aaPredicted RBP7.54□□□□□ -1.2
NUDCD1-202ENST00000427660 Q3C1V9 767 aa7.53□□□□□ -1.2
NUDCD1-202ENST00000427660 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
NUDCD1-202ENST00000427660 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
NUDCD1-202ENST00000427660 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
NUDCD1-202ENST00000427660 LYPD8Q6UX82 237 aa7.52□□□□□ -1.21
NUDCD1-202ENST00000427660 SEPT9Q9UHD8 586 aaPredicted RBP7.52□□□□□ -1.21
NUDCD1-202ENST00000427660 ZC3H4Q9UPT8 1303 aaKnown RBP7.52□□□□□ -1.21
NUDCD1-202ENST00000427660 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
NUDCD1-202ENST00000427660 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
NUDCD1-202ENST00000427660 PLEKHM2Q8IWE5 1019 aa7.51□□□□□ -1.21
NUDCD1-202ENST00000427660 FBXO45P0C2W1 286 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 MORN1Q5T089 497 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 TMEM164Q5U3C3 297 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 SAMD7Q7Z3H4 446 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 ZMIZ1Q9ULJ6 1067 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 TXNDC2Q86VQ3 553 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 FKBPLQ9UIM3 349 aa7.5□□□□□ -1.21
NUDCD1-202ENST00000427660 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
NUDCD1-202ENST00000427660 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
NUDCD1-202ENST00000427660 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
NUDCD1-202ENST00000427660 ARHGAP33O14559 1287 aa7.49□□□□□ -1.21
NUDCD1-202ENST00000427660 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
NUDCD1-202ENST00000427660 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
NUDCD1-202ENST00000427660 ERCC3P19447 782 aa7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 PSEN2P49810 448 aa7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 NOVA2Q9UNW9 492 aaKnown RBP7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 USP17L5A8MUK1 530 aa7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 ACTN4O43707 911 aaKnown RBP7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 SLC27A5Q9Y2P5 690 aa7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 SALL2Q9Y467 1007 aaPredicted RBP7.48□□□□□ -1.21
NUDCD1-202ENST00000427660 PIK3CDO00329 1044 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms