RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 C14orf37Q86TY3 774 aa21.6■■□□□ 1.05
COL11A1-204ENST00000427239 RBM33Q96EV2 1170 aaKnown RBP21.6■■□□□ 1.05
COL11A1-204ENST00000427239 LTBP4Q8N2S1 1624 aa21.59■■□□□ 1.05
COL11A1-204ENST00000427239 C19orf44Q9H6X5 657 aa21.59■■□□□ 1.05
COL11A1-204ENST00000427239 MINK1Q8N4C8 1332 aaPredicted RBP21.58■■□□□ 1.04
COL11A1-204ENST00000427239 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.04
COL11A1-204ENST00000427239 TMF1P82094 1093 aa21.56■■□□□ 1.04
COL11A1-204ENST00000427239 EVC2Q86UK5 1308 aa21.56■■□□□ 1.04
COL11A1-204ENST00000427239 ADGRL3Q9HAR2 1447 aa21.55■■□□□ 1.04
COL11A1-204ENST00000427239 WASLO00401 505 aaPredicted RBP21.54■■□□□ 1.04
COL11A1-204ENST00000427239 QRICH2Q9H0J4 1663 aa21.53■■□□□ 1.04
COL11A1-204ENST00000427239 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
COL11A1-204ENST00000427239 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.53■■□□□ 1.04
COL11A1-204ENST00000427239 MSH6P52701 1360 aa21.53■■□□□ 1.04
COL11A1-204ENST00000427239 ATF3P18847 181 aa21.52■■□□□ 1.03
COL11A1-204ENST00000427239 PUS7Q96PZ0 661 aaKnown RBP21.52■■□□□ 1.03
COL11A1-204ENST00000427239 CDK19Q9BWU1 502 aa21.52■■□□□ 1.03
COL11A1-204ENST00000427239 CADPS2Q86UW7 1296 aa21.51■■□□□ 1.03
COL11A1-204ENST00000427239 DCCP43146 1447 aa21.5■■□□□ 1.03
COL11A1-204ENST00000427239 ADGRB2O60241 1585 aa21.49■■□□□ 1.03
COL11A1-204ENST00000427239 SRPK2P78362 688 aaKnown RBP21.49■■□□□ 1.03
COL11A1-204ENST00000427239 NALCNQ8IZF0 1738 aa21.46■■□□□ 1.03
COL11A1-204ENST00000427239 CERKQ8TCT0 537 aa21.46■■□□□ 1.03
COL11A1-204ENST00000427239 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
COL11A1-204ENST00000427239 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
COL11A1-204ENST00000427239 CDC42BPGQ6DT37 1551 aa21.46■■□□□ 1.03
COL11A1-204ENST00000427239 XIRP1Q702N8 1843 aaKnown RBP21.46■■□□□ 1.03
COL11A1-204ENST00000427239 TULP4Q9NRJ4 1543 aa21.44■■□□□ 1.02
COL11A1-204ENST00000427239 C11orf95C9JLR9 678 aaPredicted RBP21.44■■□□□ 1.02
COL11A1-204ENST00000427239 IQSEC2Q5JU85 1478 aa21.44■■□□□ 1.02
COL11A1-204ENST00000427239 ZNF316A6NFI3 1004 aaPredicted RBP21.43■■□□□ 1.02
COL11A1-204ENST00000427239 NUDT16Q96DE0 195 aaKnown RBP21.43■■□□□ 1.02
COL11A1-204ENST00000427239 CCDC61Q9Y6R9 512 aa21.43■■□□□ 1.02
COL11A1-204ENST00000427239 ATAD2Q6PL18 1390 aa21.42■■□□□ 1.02
COL11A1-204ENST00000427239 SLAIN2Q9P270 581 aa21.41■■□□□ 1.02
COL11A1-204ENST00000427239 ANKARQ7Z5J8 1434 aa21.41■■□□□ 1.02
COL11A1-204ENST00000427239 NUTM2FA1L443 756 aa21.41■■□□□ 1.02
COL11A1-204ENST00000427239 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
COL11A1-204ENST00000427239 TOM1O60784 492 aa21.39■■□□□ 1.01
COL11A1-204ENST00000427239 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
COL11A1-204ENST00000427239 PRR36Q9H6K5 1346 aa21.38■■□□□ 1.01
COL11A1-204ENST00000427239 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
COL11A1-204ENST00000427239 MST1RQ04912 1400 aa21.37■■□□□ 1.01
COL11A1-204ENST00000427239 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
COL11A1-204ENST00000427239 CCDC7Q96M83 1385 aa21.37■■□□□ 1.01
COL11A1-204ENST00000427239 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
COL11A1-204ENST00000427239 ATP7BP35670 1465 aa21.36■■□□□ 1.01
COL11A1-204ENST00000427239 C1orf167Q5SNV9 1468 aa21.36■■□□□ 1.01
COL11A1-204ENST00000427239 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
COL11A1-204ENST00000427239 CABP1Q9NZU7 370 aa21.35■■□□□ 1.01
COL11A1-204ENST00000427239 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
COL11A1-204ENST00000427239 TMC1Q8TDI8 760 aa21.35■■□□□ 1.01
COL11A1-204ENST00000427239 UBAP1LF5GYI3 381 aa21.32■■□□□ 1
COL11A1-204ENST00000427239 ORAI2Q96SN7 254 aa21.32■■□□□ 1
COL11A1-204ENST00000427239 SLC12A5Q9H2X9 1139 aa21.32■■□□□ 1
COL11A1-204ENST00000427239 PHF8Q9UPP1 1060 aa21.32■■□□□ 1
COL11A1-204ENST00000427239 PPIP5K1Q6PFW1 1433 aa21.32■■□□□ 1
COL11A1-204ENST00000427239 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
COL11A1-204ENST00000427239 USP32Q8NFA0 1604 aa21.31■■□□□ 1
COL11A1-204ENST00000427239 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
COL11A1-204ENST00000427239 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
COL11A1-204ENST00000427239 BRINP3Q76B58 766 aa21.29■■□□□ 1
COL11A1-204ENST00000427239 NGDNQ8NEJ9 315 aaKnown RBP21.29■■□□□ 1
COL11A1-204ENST00000427239 ACEP12821 1306 aa21.27■■□□□ 1
COL11A1-204ENST00000427239 HDGFL2Q7Z4V5 671 aaPredicted RBP21.27■■□□□ 1
COL11A1-204ENST00000427239 ITSN1Q15811 1721 aa21.27■■□□□ 1
COL11A1-204ENST00000427239 POLR3AO14802 1390 aaPredicted RBP21.26■□□□□ 0.99
COL11A1-204ENST00000427239 RGPD8O14715 1765 aaPredicted RBP21.25■□□□□ 0.99
COL11A1-204ENST00000427239 FOXO3O43524 673 aa21.25■□□□□ 0.99
COL11A1-204ENST00000427239 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
COL11A1-204ENST00000427239 PSME1Q06323 249 aa21.24■□□□□ 0.99
COL11A1-204ENST00000427239 PANK3Q9H999 370 aa21.24■□□□□ 0.99
COL11A1-204ENST00000427239 ANKRD36BQ8N2N9 1353 aa21.24■□□□□ 0.99
COL11A1-204ENST00000427239 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
COL11A1-204ENST00000427239 PIP4K2BP78356 416 aa21.24■□□□□ 0.99
COL11A1-204ENST00000427239 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
COL11A1-204ENST00000427239 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
COL11A1-204ENST00000427239 KIF1AQ12756 1690 aa21.21■□□□□ 0.99
COL11A1-204ENST00000427239 A0A1W2PP64 1363 aa21.21■□□□□ 0.99
COL11A1-204ENST00000427239 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
COL11A1-204ENST00000427239 CD163L1Q9NR16 1453 aa21.21■□□□□ 0.99
COL11A1-204ENST00000427239 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
COL11A1-204ENST00000427239 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
COL11A1-204ENST00000427239 MYOM1P52179 1685 aa21.19■□□□□ 0.98
COL11A1-204ENST00000427239 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
COL11A1-204ENST00000427239 CARD14Q9BXL6 1004 aa21.18■□□□□ 0.98
COL11A1-204ENST00000427239 USP6P35125 1406 aa21.17■□□□□ 0.98
COL11A1-204ENST00000427239 ROBO1Q9Y6N7 1651 aa21.17■□□□□ 0.98
COL11A1-204ENST00000427239 PER1O15534 1290 aaPredicted RBP21.16■□□□□ 0.98
COL11A1-204ENST00000427239 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
COL11A1-204ENST00000427239 EDC4Q6P2E9 1401 aaKnown RBP21.16■□□□□ 0.98
COL11A1-204ENST00000427239 DDX17Q92841 729 aaKnown RBP21.15■□□□□ 0.98
COL11A1-204ENST00000427239 SOS2Q07890 1332 aaPredicted RBP21.15■□□□□ 0.98
COL11A1-204ENST00000427239 XPCQ01831 940 aaPredicted RBP21.13■□□□□ 0.97
COL11A1-204ENST00000427239 TTC21BQ7Z4L5 1316 aa21.13■□□□□ 0.97
COL11A1-204ENST00000427239 TTC21AQ8NDW8 1320 aa21.13■□□□□ 0.97
COL11A1-204ENST00000427239 SSH2Q76I76 1423 aa21.13■□□□□ 0.97
COL11A1-204ENST00000427239 PAK3O75914 559 aaPredicted RBP21.12■□□□□ 0.97
COL11A1-204ENST00000427239 LRRC59Q96AG4 307 aaKnown RBP21.12■□□□□ 0.97
COL11A1-204ENST00000427239 CGNL1Q0VF96 1302 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms