RNA–Protein interactions for RNA: ENST00000427230.2

NANOGP4-201, Transcript of Nanog homeobox pseudogene 4, humanhuman

BASIC

Gene NANOGP4, Length 913 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP4-201ENST00000427230 NPATQ14207 1427 aa9.28□□□□□ -0.92
NANOGP4-201ENST00000427230 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.92
NANOGP4-201ENST00000427230 MAP3K7O43318 606 aa9.27□□□□□ -0.93
NANOGP4-201ENST00000427230 PHF14O94880 888 aa9.27□□□□□ -0.93
NANOGP4-201ENST00000427230 PCDHGA10Q9Y5H3 936 aa9.27□□□□□ -0.93
NANOGP4-201ENST00000427230 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
NANOGP4-201ENST00000427230 NUP153P49790 1475 aaKnown RBP9.27□□□□□ -0.93
NANOGP4-201ENST00000427230 ZMYM3Q14202 1370 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 PLCH2O75038 1416 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 NUDT7P0C024 238 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 HIC1Q14526 733 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 EPAS1Q99814 870 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 AGLP35573 1532 aa9.26□□□□□ -0.93
NANOGP4-201ENST00000427230 CNTLNQ9NXG0 1405 aa9.25□□□□□ -0.93
NANOGP4-201ENST00000427230 PDE4DQ08499 809 aa9.25□□□□□ -0.93
NANOGP4-201ENST00000427230 PTGDRQ13258 359 aa9.25□□□□□ -0.93
NANOGP4-201ENST00000427230 DOK7Q18PE1 504 aa9.25□□□□□ -0.93
NANOGP4-201ENST00000427230 MYT1LQ9UL68 1186 aa9.25□□□□□ -0.93
NANOGP4-201ENST00000427230 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 DIP2CQ9Y2E4 1556 aa9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 IRF6O14896 467 aa9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 HOXB3P14651 431 aaPredicted RBP9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 EN1Q05925 392 aaPredicted RBP9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 TSR1Q2NL82 804 aaKnown RBP9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 EFCAB2Q5VUJ9 269 aa9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 CCDC102AQ96A19 550 aa9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 SUPT6HQ7KZ85 1726 aaKnown RBP9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 SAMD9Q5K651 1589 aa9.24□□□□□ -0.93
NANOGP4-201ENST00000427230 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
NANOGP4-201ENST00000427230 TYW1BQ6NUM6 668 aa9.23□□□□□ -0.93
NANOGP4-201ENST00000427230 ZNF710Q8N1W2 664 aa9.23□□□□□ -0.93
NANOGP4-201ENST00000427230 CEP170BQ9Y4F5 1589 aaPredicted RBP9.22□□□□□ -0.93
NANOGP4-201ENST00000427230 ZNF454Q8N9F8 522 aa9.22□□□□□ -0.93
NANOGP4-201ENST00000427230 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
NANOGP4-201ENST00000427230 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
NANOGP4-201ENST00000427230 ZNF142P52746 1687 aaPredicted RBP9.22□□□□□ -0.93
NANOGP4-201ENST00000427230 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.93
NANOGP4-201ENST00000427230 KDM5CP41229 1560 aa9.21□□□□□ -0.93
NANOGP4-201ENST00000427230 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
NANOGP4-201ENST00000427230 KDM4CQ9H3R0 1056 aa9.21□□□□□ -0.94
NANOGP4-201ENST00000427230 VWDEQ8N2E2 1590 aa9.2□□□□□ -0.94
NANOGP4-201ENST00000427230 ABCA6Q8N139 1617 aa9.2□□□□□ -0.94
NANOGP4-201ENST00000427230 MYO3AQ8NEV4 1616 aa9.2□□□□□ -0.94
NANOGP4-201ENST00000427230 GPR153Q6NV75 609 aa9.2□□□□□ -0.94
NANOGP4-201ENST00000427230 MROH2AA6NES4 1674 aa9.2□□□□□ -0.94
NANOGP4-201ENST00000427230 FOSBP53539 338 aa9.19□□□□□ -0.94
NANOGP4-201ENST00000427230 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
NANOGP4-201ENST00000427230 MLH3Q9UHC1 1453 aa9.19□□□□□ -0.94
NANOGP4-201ENST00000427230 NEURL4Q96JN8 1562 aa9.19□□□□□ -0.94
NANOGP4-201ENST00000427230 FBXW7Q969H0 707 aa9.18□□□□□ -0.94
NANOGP4-201ENST00000427230 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
NANOGP4-201ENST00000427230 LRRC7Q96NW7 1537 aa9.17□□□□□ -0.94
NANOGP4-201ENST00000427230 C6orf132Q5T0Z8 1188 aa9.17□□□□□ -0.94
NANOGP4-201ENST00000427230 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
NANOGP4-201ENST00000427230 ST18O60284 1047 aa9.16□□□□□ -0.94
NANOGP4-201ENST00000427230 FAM161AQ3B820 660 aa9.16□□□□□ -0.94
NANOGP4-201ENST00000427230 ADAM33Q9BZ11 813 aa9.16□□□□□ -0.94
NANOGP4-201ENST00000427230 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
NANOGP4-201ENST00000427230 A2ML1A8K2U0 1454 aa9.15□□□□□ -0.94
NANOGP4-201ENST00000427230 STRCP1A6NGW2 1772 aa9.15□□□□□ -0.94
NANOGP4-201ENST00000427230 POLR1AO95602 1720 aaPredicted RBP9.15□□□□□ -0.94
NANOGP4-201ENST00000427230 ANKLE2Q86XL3 938 aa9.15□□□□□ -0.94
NANOGP4-201ENST00000427230 TRIM52Q96A61 297 aa9.15□□□□□ -0.94
NANOGP4-201ENST00000427230 ZSWIM6Q9HCJ5 1215 aa9.15□□□□□ -0.94
NANOGP4-201ENST00000427230 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
NANOGP4-201ENST00000427230 MYO5CQ9NQX4 1742 aa9.14□□□□□ -0.95
NANOGP4-201ENST00000427230 CLTCQ00610 1675 aaKnown RBP9.13□□□□□ -0.95
NANOGP4-201ENST00000427230 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
NANOGP4-201ENST00000427230 FAM135BQ49AJ0 1406 aa9.13□□□□□ -0.95
NANOGP4-201ENST00000427230 RNF17Q9BXT8 1623 aaKnown RBP9.13□□□□□ -0.95
NANOGP4-201ENST00000427230 KIDINS220Q9ULH0 1771 aa9.12□□□□□ -0.95
NANOGP4-201ENST00000427230 AMHR2Q16671 573 aa9.12□□□□□ -0.95
NANOGP4-201ENST00000427230 PARP9Q8IXQ6 854 aa9.12□□□□□ -0.95
NANOGP4-201ENST00000427230 SNPHO15079 494 aa9.11□□□□□ -0.95
NANOGP4-201ENST00000427230 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
NANOGP4-201ENST00000427230 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
NANOGP4-201ENST00000427230 NPHP4O75161 1426 aaPredicted RBP9.11□□□□□ -0.95
NANOGP4-201ENST00000427230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
NANOGP4-201ENST00000427230 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
NANOGP4-201ENST00000427230 MED14O60244 1454 aa9.1□□□□□ -0.95
NANOGP4-201ENST00000427230 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
NANOGP4-201ENST00000427230 NLRP7Q8WX94 980 aa9.1□□□□□ -0.95
NANOGP4-201ENST00000427230 LRRIQ1Q96JM4 1722 aa9.1□□□□□ -0.95
NANOGP4-201ENST00000427230 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
NANOGP4-201ENST00000427230 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
NANOGP4-201ENST00000427230 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
NANOGP4-201ENST00000427230 GGT6Q6P531 493 aa9.09□□□□□ -0.95
NANOGP4-201ENST00000427230 THEMISQ8N1K5 641 aaPredicted RBP9.09□□□□□ -0.95
NANOGP4-201ENST00000427230 PHOX2BQ99453 314 aa9.09□□□□□ -0.95
NANOGP4-201ENST00000427230 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
NANOGP4-201ENST00000427230 MDM2Q00987 491 aaPredicted RBP9.08□□□□□ -0.96
NANOGP4-201ENST00000427230 ZNF772Q68DY9 489 aaPredicted RBP9.08□□□□□ -0.96
NANOGP4-201ENST00000427230 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
NANOGP4-201ENST00000427230 COL9A1P20849 921 aa9.07□□□□□ -0.96
NANOGP4-201ENST00000427230 RXRBP28702 533 aa9.07□□□□□ -0.96
NANOGP4-201ENST00000427230 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
NANOGP4-201ENST00000427230 XIRP1Q702N8 1843 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms