RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
C9orf3-205ENST00000427193 CD2BP2O95400 341 aaKnown RBP12.49□□□□□ -0.41
C9orf3-205ENST00000427193 MMP16P51512 607 aa12.49□□□□□ -0.41
C9orf3-205ENST00000427193 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
C9orf3-205ENST00000427193 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
C9orf3-205ENST00000427193 TNFRSF10AO00220 468 aa12.48□□□□□ -0.41
C9orf3-205ENST00000427193 AMHR2Q16671 573 aa12.48□□□□□ -0.41
C9orf3-205ENST00000427193 HLA-CQ95604 372 aa12.48□□□□□ -0.41
C9orf3-205ENST00000427193 DGAT1O75907 488 aa12.47□□□□□ -0.41
C9orf3-205ENST00000427193 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
C9orf3-205ENST00000427193 ZBTB24O43167 697 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-205ENST00000427193 SSTR3P32745 418 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-205ENST00000427193 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-205ENST00000427193 DXOO77932 396 aaKnown RBP12.45□□□□□ -0.42
C9orf3-205ENST00000427193 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
C9orf3-205ENST00000427193 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
C9orf3-205ENST00000427193 FOXC1Q12948 553 aa12.43□□□□□ -0.42
C9orf3-205ENST00000427193 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
C9orf3-205ENST00000427193 MYT1Q01538 1121 aa12.4□□□□□ -0.42
C9orf3-205ENST00000427193 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
C9orf3-205ENST00000427193 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
C9orf3-205ENST00000427193 SPIRE2Q8WWL2 714 aa12.39□□□□□ -0.43
C9orf3-205ENST00000427193 FDX1P10109 184 aa12.38□□□□□ -0.43
C9orf3-205ENST00000427193 JUNDP17535 347 aa12.37□□□□□ -0.43
C9orf3-205ENST00000427193 TRIM32Q13049 653 aa12.37□□□□□ -0.43
C9orf3-205ENST00000427193 SYMPKQ92797 1274 aaKnown RBP12.37□□□□□ -0.43
C9orf3-205ENST00000427193 AK7Q96M32 723 aa12.36□□□□□ -0.43
C9orf3-205ENST00000427193 TOR4AQ9NXH8 423 aa12.36□□□□□ -0.43
C9orf3-205ENST00000427193 TRIM66O15016 1216 aa12.35□□□□□ -0.43
C9orf3-205ENST00000427193 ZNF787Q6DD87 383 aa12.35□□□□□ -0.43
C9orf3-205ENST00000427193 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
C9orf3-205ENST00000427193 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
C9orf3-205ENST00000427193 PARP9Q8IXQ6 854 aa12.34□□□□□ -0.43
C9orf3-205ENST00000427193 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
C9orf3-205ENST00000427193 C6orf229H3BNL8 230 aa12.33□□□□□ -0.44
C9orf3-205ENST00000427193 WNT7AO00755 349 aa12.33□□□□□ -0.44
C9orf3-205ENST00000427193 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
C9orf3-205ENST00000427193 MOXD2PA6NHM9 499 aa12.32□□□□□ -0.44
C9orf3-205ENST00000427193 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
C9orf3-205ENST00000427193 NDUFV2P19404 249 aa12.31□□□□□ -0.44
C9orf3-205ENST00000427193 GJA5P36382 358 aa12.29□□□□□ -0.44
C9orf3-205ENST00000427193 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
C9orf3-205ENST00000427193 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-205ENST00000427193 AVPP01185 164 aa12.28□□□□□ -0.44
C9orf3-205ENST00000427193 WNT7BP56706 349 aa12.28□□□□□ -0.44
C9orf3-205ENST00000427193 CRIPAKQ8N1N5 446 aa12.28□□□□□ -0.44
C9orf3-205ENST00000427193 SPDYE5A6NIY4 337 aa12.27□□□□□ -0.45
C9orf3-205ENST00000427193 MS4A1P11836 297 aa12.27□□□□□ -0.45
C9orf3-205ENST00000427193 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.45
C9orf3-205ENST00000427193 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
C9orf3-205ENST00000427193 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
C9orf3-205ENST00000427193 MTMR2Q13614 643 aa12.26□□□□□ -0.45
C9orf3-205ENST00000427193 MRGPRX2Q96LB1 330 aa12.26□□□□□ -0.45
C9orf3-205ENST00000427193 ST8SIA5O15466 376 aa12.25□□□□□ -0.45
C9orf3-205ENST00000427193 CCNYL3P0C7X3 344 aa12.24□□□□□ -0.45
C9orf3-205ENST00000427193 PTPRNQ16849 979 aa12.24□□□□□ -0.45
C9orf3-205ENST00000427193 RSBN1LQ6PCB5 846 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-205ENST00000427193 PRR7Q8TB68 274 aa12.24□□□□□ -0.45
C9orf3-205ENST00000427193 SKOR1P84550 965 aa12.23□□□□□ -0.45
C9orf3-205ENST00000427193 PDE4DQ08499 809 aa12.23□□□□□ -0.45
C9orf3-205ENST00000427193 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
C9orf3-205ENST00000427193 DESI1Q6ICB0 168 aa12.23□□□□□ -0.45
C9orf3-205ENST00000427193 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
C9orf3-205ENST00000427193 SPTLC1O15269 473 aa12.21□□□□□ -0.45
C9orf3-205ENST00000427193 SMCPP49901 116 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-205ENST00000427193 PTCRAQ6ISU1 281 aaPredicted RBP12.21□□□□□ -0.45
C9orf3-205ENST00000427193 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
C9orf3-205ENST00000427193 AXIN1O15169 862 aa12.2□□□□□ -0.46
C9orf3-205ENST00000427193 SMPD1P17405 629 aa12.2□□□□□ -0.46
C9orf3-205ENST00000427193 EVA1BQ9NVM1 165 aa12.19□□□□□ -0.46
C9orf3-205ENST00000427193 POTECB2RU33 542 aa12.18□□□□□ -0.46
C9orf3-205ENST00000427193 RIC3Q7Z5B4 369 aa12.17□□□□□ -0.46
C9orf3-205ENST00000427193 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
C9orf3-205ENST00000427193 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
C9orf3-205ENST00000427193 J3QL48 77 aa12.16□□□□□ -0.46
C9orf3-205ENST00000427193 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
C9orf3-205ENST00000427193 PRPF38BQ5VTL8 546 aaKnown RBP12.16□□□□□ -0.46
C9orf3-205ENST00000427193 UNC93B1Q9H1C4 597 aa12.16□□□□□ -0.46
C9orf3-205ENST00000427193 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-205ENST00000427193 HRCP23327 699 aa12.14□□□□□ -0.47
C9orf3-205ENST00000427193 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
C9orf3-205ENST00000427193 SH3BP2P78314 561 aa12.13□□□□□ -0.47
C9orf3-205ENST00000427193 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
C9orf3-205ENST00000427193 CFAP99D6REC4 459 aa12.12□□□□□ -0.47
C9orf3-205ENST00000427193 TUSC1Q2TAM9 212 aa12.12□□□□□ -0.47
C9orf3-205ENST00000427193 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
C9orf3-205ENST00000427193 LYPD8Q6UX82 237 aa12.12□□□□□ -0.47
C9orf3-205ENST00000427193 SIAH2O43255 324 aa12.11□□□□□ -0.47
C9orf3-205ENST00000427193 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
C9orf3-205ENST00000427193 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
C9orf3-205ENST00000427193 HPS1Q92902 700 aa12.09□□□□□ -0.47
C9orf3-205ENST00000427193 BCANQ96GW7 911 aa12.09□□□□□ -0.47
C9orf3-205ENST00000427193 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
C9orf3-205ENST00000427193 ZNF511Q8NB15 262 aa12.08□□□□□ -0.48
C9orf3-205ENST00000427193 BAP1Q92560 729 aa12.08□□□□□ -0.48
C9orf3-205ENST00000427193 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
C9orf3-205ENST00000427193 LIMD1Q9UGP4 676 aa12.08□□□□□ -0.48
C9orf3-205ENST00000427193 CTHP32929 405 aa12.07□□□□□ -0.48
C9orf3-205ENST00000427193 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
C9orf3-205ENST00000427193 ATP13A2Q9NQ11 1180 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms