RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 GDF9O60383 454 aa9.3□□□□□ -0.92
LINC02541-201ENST00000427157 RPIAP49247 311 aa9.29□□□□□ -0.92
LINC02541-201ENST00000427157 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
LINC02541-201ENST00000427157 USB1Q9BQ65 265 aaKnown RBP9.28□□□□□ -0.92
LINC02541-201ENST00000427157 MMP16P51512 607 aa9.27□□□□□ -0.93
LINC02541-201ENST00000427157 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
LINC02541-201ENST00000427157 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
LINC02541-201ENST00000427157 AMHR2Q16671 573 aa9.26□□□□□ -0.93
LINC02541-201ENST00000427157 DXOO77932 396 aaKnown RBP9.25□□□□□ -0.93
LINC02541-201ENST00000427157 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
LINC02541-201ENST00000427157 FOXC1Q12948 553 aa9.25□□□□□ -0.93
LINC02541-201ENST00000427157 PKDCCQ504Y2 493 aa9.25□□□□□ -0.93
LINC02541-201ENST00000427157 NUTM1Q86Y26 1132 aa9.25□□□□□ -0.93
LINC02541-201ENST00000427157 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
LINC02541-201ENST00000427157 FAM187AA6NFU0 413 aa9.23□□□□□ -0.93
LINC02541-201ENST00000427157 DGAT1O75907 488 aa9.23□□□□□ -0.93
LINC02541-201ENST00000427157 CD2BP2O95400 341 aaKnown RBP9.23□□□□□ -0.93
LINC02541-201ENST00000427157 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
LINC02541-201ENST00000427157 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
LINC02541-201ENST00000427157 MYT1Q01538 1121 aa9.22□□□□□ -0.93
LINC02541-201ENST00000427157 FDX1P10109 184 aa9.21□□□□□ -0.94
LINC02541-201ENST00000427157 SPIRE2Q8WWL2 714 aa9.21□□□□□ -0.94
LINC02541-201ENST00000427157 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
LINC02541-201ENST00000427157 TRIM32Q13049 653 aa9.2□□□□□ -0.94
LINC02541-201ENST00000427157 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
LINC02541-201ENST00000427157 RETREG3Q86VR2 466 aa9.19□□□□□ -0.94
LINC02541-201ENST00000427157 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
LINC02541-201ENST00000427157 TRIM66O15016 1216 aa9.18□□□□□ -0.94
LINC02541-201ENST00000427157 JUNDP17535 347 aa9.18□□□□□ -0.94
LINC02541-201ENST00000427157 CCDC24Q8N4L8 307 aa9.18□□□□□ -0.94
LINC02541-201ENST00000427157 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
LINC02541-201ENST00000427157 NDUFV2P19404 249 aa9.17□□□□□ -0.94
LINC02541-201ENST00000427157 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
LINC02541-201ENST00000427157 C6orf229H3BNL8 230 aa9.16□□□□□ -0.94
LINC02541-201ENST00000427157 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
LINC02541-201ENST00000427157 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
LINC02541-201ENST00000427157 AK7Q96M32 723 aa9.16□□□□□ -0.94
LINC02541-201ENST00000427157 WNT7AO00755 349 aa9.15□□□□□ -0.94
LINC02541-201ENST00000427157 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
LINC02541-201ENST00000427157 MS4A1P11836 297 aa9.15□□□□□ -0.94
LINC02541-201ENST00000427157 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
LINC02541-201ENST00000427157 AAASQ9NRG9 546 aa9.13□□□□□ -0.95
LINC02541-201ENST00000427157 SKOR1P84550 965 aa9.12□□□□□ -0.95
LINC02541-201ENST00000427157 MRGPRX2Q96LB1 330 aa9.12□□□□□ -0.95
LINC02541-201ENST00000427157 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
LINC02541-201ENST00000427157 TTC24A2A3L6 582 aaPredicted RBP9.11□□□□□ -0.95
LINC02541-201ENST00000427157 POTECB2RU33 542 aa9.1□□□□□ -0.95
LINC02541-201ENST00000427157 AVPP01185 164 aa9.1□□□□□ -0.95
LINC02541-201ENST00000427157 MTMR2Q13614 643 aa9.1□□□□□ -0.95
LINC02541-201ENST00000427157 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
LINC02541-201ENST00000427157 RSBN1LQ6PCB5 846 aaPredicted RBP9.1□□□□□ -0.95
LINC02541-201ENST00000427157 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
LINC02541-201ENST00000427157 SLC24A3Q9HC58 644 aa9.1□□□□□ -0.95
LINC02541-201ENST00000427157 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
LINC02541-201ENST00000427157 WNT7BP56706 349 aa9.09□□□□□ -0.95
LINC02541-201ENST00000427157 PDE4DQ08499 809 aa9.09□□□□□ -0.95
LINC02541-201ENST00000427157 DIXDC1Q155Q3 683 aa9.09□□□□□ -0.95
LINC02541-201ENST00000427157 SNIP1Q8TAD8 396 aaKnown RBP9.09□□□□□ -0.95
LINC02541-201ENST00000427157 PRR7Q8TB68 274 aa9.09□□□□□ -0.95
LINC02541-201ENST00000427157 SMPD1P17405 629 aa9.08□□□□□ -0.96
LINC02541-201ENST00000427157 GJA5P36382 358 aa9.08□□□□□ -0.96
LINC02541-201ENST00000427157 PTPRNQ16849 979 aa9.08□□□□□ -0.96
LINC02541-201ENST00000427157 RC3H1Q5TC82 1133 aaKnown RBP9.08□□□□□ -0.96
LINC02541-201ENST00000427157 SPDYE5A6NIY4 337 aa9.07□□□□□ -0.96
LINC02541-201ENST00000427157 J3QL48 77 aa9.07□□□□□ -0.96
LINC02541-201ENST00000427157 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
LINC02541-201ENST00000427157 PCDHB15Q9Y5E8 787 aa9.07□□□□□ -0.96
LINC02541-201ENST00000427157 SPTLC1O15269 473 aa9.06□□□□□ -0.96
LINC02541-201ENST00000427157 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
LINC02541-201ENST00000427157 AXIN1O15169 862 aa9.05□□□□□ -0.96
LINC02541-201ENST00000427157 DESI1Q6ICB0 168 aa9.05□□□□□ -0.96
LINC02541-201ENST00000427157 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
LINC02541-201ENST00000427157 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
LINC02541-201ENST00000427157 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
LINC02541-201ENST00000427157 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
LINC02541-201ENST00000427157 EVA1BQ9NVM1 165 aa9.04□□□□□ -0.96
LINC02541-201ENST00000427157 CFAP99D6REC4 459 aa9.03□□□□□ -0.96
LINC02541-201ENST00000427157 HRCP23327 699 aa9.03□□□□□ -0.96
LINC02541-201ENST00000427157 SH3BP2P78314 561 aa9.02□□□□□ -0.97
LINC02541-201ENST00000427157 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
LINC02541-201ENST00000427157 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
LINC02541-201ENST00000427157 EHBP1Q8NDI1 1231 aa9.02□□□□□ -0.97
LINC02541-201ENST00000427157 CABLES1Q8TDN4 633 aa9.02□□□□□ -0.97
LINC02541-201ENST00000427157 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
LINC02541-201ENST00000427157 KCNH2Q12809 1159 aa9.01□□□□□ -0.97
LINC02541-201ENST00000427157 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
LINC02541-201ENST00000427157 HPS1Q92902 700 aa9.01□□□□□ -0.97
LINC02541-201ENST00000427157 LIMD1Q9UGP4 676 aa9.01□□□□□ -0.97
LINC02541-201ENST00000427157 SIAH2O43255 324 aa9□□□□□ -0.97
LINC02541-201ENST00000427157 ALDH1A1P00352 501 aa9□□□□□ -0.97
LINC02541-201ENST00000427157 PRPF38BQ5VTL8 546 aaKnown RBP9□□□□□ -0.97
LINC02541-201ENST00000427157 LYPD8Q6UX82 237 aa9□□□□□ -0.97
LINC02541-201ENST00000427157 BAP1Q92560 729 aa8.99□□□□□ -0.97
LINC02541-201ENST00000427157 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
LINC02541-201ENST00000427157 QPCTQ16769 361 aa8.98□□□□□ -0.97
LINC02541-201ENST00000427157 ZNF511Q8NB15 262 aa8.98□□□□□ -0.97
LINC02541-201ENST00000427157 CTHP32929 405 aa8.97□□□□□ -0.97
LINC02541-201ENST00000427157 MAP10Q9P2G4 905 aa8.97□□□□□ -0.97
LINC02541-201ENST00000427157 PER1O15534 1290 aaPredicted RBP8.96□□□□□ -0.98
LINC02541-201ENST00000427157 F12P00748 615 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms