RNA–Protein interactions for RNA: ENST00000426992.2

UBE2D3P3-201, Transcript of ubiquitin conjugating enzyme E2 D3 pseudogene 3, humanhuman

BASIC

Gene UBE2D3P3, Length 425 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P3-201ENST00000426992 NYAP1Q6ZVC0 841 aa10.86□□□□□ -0.67
UBE2D3P3-201ENST00000426992 HRCP23327 699 aa10.85□□□□□ -0.67
UBE2D3P3-201ENST00000426992 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
UBE2D3P3-201ENST00000426992 MTMR2Q13614 643 aa10.84□□□□□ -0.67
UBE2D3P3-201ENST00000426992 Q3C1V9 767 aa10.84□□□□□ -0.67
UBE2D3P3-201ENST00000426992 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3P3-201ENST00000426992 RNF166Q96A37 237 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3P3-201ENST00000426992 NR1I2O75469 434 aa10.83□□□□□ -0.68
UBE2D3P3-201ENST00000426992 SYMPKQ92797 1274 aaKnown RBP10.83□□□□□ -0.68
UBE2D3P3-201ENST00000426992 COPS2P61201 443 aa10.82□□□□□ -0.68
UBE2D3P3-201ENST00000426992 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
UBE2D3P3-201ENST00000426992 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
UBE2D3P3-201ENST00000426992 SPDYE5A6NIY4 337 aa10.8□□□□□ -0.68
UBE2D3P3-201ENST00000426992 TMEM259Q4ZIN3 620 aa10.8□□□□□ -0.68
UBE2D3P3-201ENST00000426992 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
UBE2D3P3-201ENST00000426992 AP1G2O75843 785 aa10.79□□□□□ -0.68
UBE2D3P3-201ENST00000426992 FLIIQ13045 1269 aa10.79□□□□□ -0.68
UBE2D3P3-201ENST00000426992 ERICH6Q7L0X2 663 aa10.79□□□□□ -0.68
UBE2D3P3-201ENST00000426992 FMNL1O95466 1100 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 RETREG3Q86VR2 466 aa10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 TSC1Q92574 1164 aa10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 MTRQ99707 1265 aa10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 HCSTQ9UBK5 93 aa10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3P3-201ENST00000426992 CFAP99D6REC4 459 aa10.77□□□□□ -0.69
UBE2D3P3-201ENST00000426992 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
UBE2D3P3-201ENST00000426992 BANK1Q8NDB2 785 aa10.76□□□□□ -0.69
UBE2D3P3-201ENST00000426992 THAP11Q96EK4 314 aa10.76□□□□□ -0.69
UBE2D3P3-201ENST00000426992 USB1Q9BQ65 265 aaKnown RBP10.76□□□□□ -0.69
UBE2D3P3-201ENST00000426992 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3P3-201ENST00000426992 IL21Q9HBE4 155 aa10.75□□□□□ -0.69
UBE2D3P3-201ENST00000426992 ZPR1O75312 459 aa10.74□□□□□ -0.69
UBE2D3P3-201ENST00000426992 MCM6Q14566 821 aa10.74□□□□□ -0.69
UBE2D3P3-201ENST00000426992 TJAP1Q5JTD0 557 aa10.74□□□□□ -0.69
UBE2D3P3-201ENST00000426992 SPSB2Q99619 263 aa10.73□□□□□ -0.69
UBE2D3P3-201ENST00000426992 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
UBE2D3P3-201ENST00000426992 TLL1O43897 1013 aa10.72□□□□□ -0.69
UBE2D3P3-201ENST00000426992 USP17L8P0C7I0 530 aa10.72□□□□□ -0.69
UBE2D3P3-201ENST00000426992 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
UBE2D3P3-201ENST00000426992 ZNF516Q92618 1163 aa10.72□□□□□ -0.69
UBE2D3P3-201ENST00000426992 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
UBE2D3P3-201ENST00000426992 ADH1BP00325 375 aa10.69□□□□□ -0.7
UBE2D3P3-201ENST00000426992 DESI1Q6ICB0 168 aa10.69□□□□□ -0.7
UBE2D3P3-201ENST00000426992 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3P3-201ENST00000426992 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
UBE2D3P3-201ENST00000426992 MSS51Q4VC12 460 aa10.68□□□□□ -0.7
UBE2D3P3-201ENST00000426992 MTMR14Q8NCE2 650 aa10.68□□□□□ -0.7
UBE2D3P3-201ENST00000426992 JUNDP17535 347 aa10.67□□□□□ -0.7
UBE2D3P3-201ENST00000426992 LRRN4Q8WUT4 740 aa10.67□□□□□ -0.7
UBE2D3P3-201ENST00000426992 PER1O15534 1290 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3P3-201ENST00000426992 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
UBE2D3P3-201ENST00000426992 PRDM9Q9NQV7 894 aa10.66□□□□□ -0.7
UBE2D3P3-201ENST00000426992 APBB1O00213 710 aa10.65□□□□□ -0.7
UBE2D3P3-201ENST00000426992 KCNC4Q03721 635 aa10.65□□□□□ -0.7
UBE2D3P3-201ENST00000426992 LYPD8Q6UX82 237 aa10.65□□□□□ -0.7
UBE2D3P3-201ENST00000426992 HMX1Q9NP08 348 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3P3-201ENST00000426992 ZMYND15Q9H091 742 aa10.64□□□□□ -0.71
UBE2D3P3-201ENST00000426992 DXOO77932 396 aaKnown RBP10.63□□□□□ -0.71
UBE2D3P3-201ENST00000426992 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3P3-201ENST00000426992 SLC6A16Q9GZN6 736 aa10.63□□□□□ -0.71
UBE2D3P3-201ENST00000426992 SOCS7O14512 581 aa10.62□□□□□ -0.71
UBE2D3P3-201ENST00000426992 RAD21O60216 631 aa10.62□□□□□ -0.71
UBE2D3P3-201ENST00000426992 CLUAP1Q96AJ1 413 aa10.62□□□□□ -0.71
UBE2D3P3-201ENST00000426992 MMP16P51512 607 aa10.61□□□□□ -0.71
UBE2D3P3-201ENST00000426992 PTPRNQ16849 979 aa10.61□□□□□ -0.71
UBE2D3P3-201ENST00000426992 POM121Q96HA1 1249 aa10.61□□□□□ -0.71
UBE2D3P3-201ENST00000426992 PRM3Q9NNZ6 103 aa10.61□□□□□ -0.71
UBE2D3P3-201ENST00000426992 S1PR4O95977 384 aa10.6□□□□□ -0.71
UBE2D3P3-201ENST00000426992 GJD4Q96KN9 370 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3P3-201ENST00000426992 COG6Q9Y2V7 657 aa10.6□□□□□ -0.71
UBE2D3P3-201ENST00000426992 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
UBE2D3P3-201ENST00000426992 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
UBE2D3P3-201ENST00000426992 GDPD2Q9HCC8 539 aa10.59□□□□□ -0.71
UBE2D3P3-201ENST00000426992 CCNYL3P0C7X3 344 aa10.58□□□□□ -0.72
UBE2D3P3-201ENST00000426992 NR6A1Q15406 480 aa10.58□□□□□ -0.72
UBE2D3P3-201ENST00000426992 EPS8L1Q8TE68 723 aa10.58□□□□□ -0.72
UBE2D3P3-201ENST00000426992 NDUFB9Q9Y6M9 179 aa10.58□□□□□ -0.72
UBE2D3P3-201ENST00000426992 A6NJR5 290 aa10.57□□□□□ -0.72
UBE2D3P3-201ENST00000426992 CTHP32929 405 aa10.57□□□□□ -0.72
UBE2D3P3-201ENST00000426992 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
UBE2D3P3-201ENST00000426992 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
UBE2D3P3-201ENST00000426992 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
UBE2D3P3-201ENST00000426992 F12P00748 615 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3P3-201ENST00000426992 ABL2P42684 1182 aa10.55□□□□□ -0.72
UBE2D3P3-201ENST00000426992 EVA1BQ9NVM1 165 aa10.55□□□□□ -0.72
UBE2D3P3-201ENST00000426992 GGCXP38435 758 aa10.53□□□□□ -0.72
UBE2D3P3-201ENST00000426992 KCNH2Q12809 1159 aa10.53□□□□□ -0.72
UBE2D3P3-201ENST00000426992 PROSER2Q86WR7 435 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3P3-201ENST00000426992 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
UBE2D3P3-201ENST00000426992 PPEF1O14829 653 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3P3-201ENST00000426992 PNMA1Q8ND90 353 aa10.52□□□□□ -0.73
UBE2D3P3-201ENST00000426992 RNF223E7ERA6 249 aa10.5□□□□□ -0.73
UBE2D3P3-201ENST00000426992 SUPT5HO00267 1087 aaKnown RBP10.5□□□□□ -0.73
UBE2D3P3-201ENST00000426992 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
UBE2D3P3-201ENST00000426992 TRAK2O60296 914 aa10.49□□□□□ -0.73
UBE2D3P3-201ENST00000426992 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
UBE2D3P3-201ENST00000426992 PPP1R18Q6NYC8 613 aa10.49□□□□□ -0.73
UBE2D3P3-201ENST00000426992 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms