RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 PNPLA6Q8IY17 1366 aa15.05■□□□□ -0
GACAT3-201ENST00000426539 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
GACAT3-201ENST00000426539 RGL3Q3MIN7 710 aa15.04■□□□□ -0
GACAT3-201ENST00000426539 SOS2Q07890 1332 aaPredicted RBP15.02■□□□□ -0
GACAT3-201ENST00000426539 AFF2P51816 1311 aa15.01□□□□□ -0.01
GACAT3-201ENST00000426539 LAMC1P11047 1609 aa15□□□□□ -0.01
GACAT3-201ENST00000426539 TECPR2O15040 1411 aa15□□□□□ -0.01
GACAT3-201ENST00000426539 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
GACAT3-201ENST00000426539 RXRBP28702 533 aa14.99□□□□□ -0.01
GACAT3-201ENST00000426539 WAPLQ7Z5K2 1190 aa14.99□□□□□ -0.01
GACAT3-201ENST00000426539 LRPPRCP42704 1394 aaKnown RBP14.98□□□□□ -0.01
GACAT3-201ENST00000426539 TMEM132EQ6IEE7 984 aa14.98□□□□□ -0.01
GACAT3-201ENST00000426539 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
GACAT3-201ENST00000426539 STK26Q9P289 416 aa14.98□□□□□ -0.01
GACAT3-201ENST00000426539 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
GACAT3-201ENST00000426539 PLEKHH1Q9ULM0 1364 aa14.98□□□□□ -0.01
GACAT3-201ENST00000426539 CDC42BPGQ6DT37 1551 aa14.97□□□□□ -0.01
GACAT3-201ENST00000426539 IFT172Q9UG01 1749 aa14.97□□□□□ -0.01
GACAT3-201ENST00000426539 ABCC11Q96J66 1382 aa14.97□□□□□ -0.01
GACAT3-201ENST00000426539 UPF1Q92900 1129 aaKnown RBP eCLIP14.96□□□□□ -0.01
GACAT3-201ENST00000426539 ADAMTS2O95450 1211 aa14.95□□□□□ -0.02
GACAT3-201ENST00000426539 ESCO1Q5FWF5 840 aa14.95□□□□□ -0.02
GACAT3-201ENST00000426539 CDK12Q9NYV4 1490 aaPredicted RBP14.95□□□□□ -0.02
GACAT3-201ENST00000426539 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
GACAT3-201ENST00000426539 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
GACAT3-201ENST00000426539 C14orf93Q9H972 538 aaKnown RBP14.93□□□□□ -0.02
GACAT3-201ENST00000426539 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
GACAT3-201ENST00000426539 RAB3GAP2Q9H2M9 1393 aa14.93□□□□□ -0.02
GACAT3-201ENST00000426539 PXDNQ92626 1479 aa14.93□□□□□ -0.02
GACAT3-201ENST00000426539 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
GACAT3-201ENST00000426539 FOXO3O43524 673 aa14.92□□□□□ -0.02
GACAT3-201ENST00000426539 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
GACAT3-201ENST00000426539 NGLY1Q96IV0 654 aa14.92□□□□□ -0.02
GACAT3-201ENST00000426539 RGS12O14924 1447 aa14.92□□□□□ -0.02
GACAT3-201ENST00000426539 NPHP3Q7Z494 1330 aa14.92□□□□□ -0.02
GACAT3-201ENST00000426539 MYOM2P54296 1465 aa14.91□□□□□ -0.02
GACAT3-201ENST00000426539 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
GACAT3-201ENST00000426539 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
GACAT3-201ENST00000426539 CFAP70Q5T0N1 1121 aa14.91□□□□□ -0.02
GACAT3-201ENST00000426539 SIRT1Q96EB6 747 aa14.91□□□□□ -0.02
GACAT3-201ENST00000426539 KNDC1Q76NI1 1749 aa14.91□□□□□ -0.02
GACAT3-201ENST00000426539 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
GACAT3-201ENST00000426539 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
GACAT3-201ENST00000426539 FNBP4Q8N3X1 1017 aaPredicted RBP14.89□□□□□ -0.03
GACAT3-201ENST00000426539 USP21Q9UK80 565 aa14.88□□□□□ -0.03
GACAT3-201ENST00000426539 FMN2Q9NZ56 1722 aa14.86□□□□□ -0.03
GACAT3-201ENST00000426539 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
GACAT3-201ENST00000426539 ATRNO75882 1429 aa14.85□□□□□ -0.03
GACAT3-201ENST00000426539 PRAM1Q96QH2 718 aa14.85□□□□□ -0.03
GACAT3-201ENST00000426539 TRPC5Q9UL62 973 aaPredicted RBP14.85□□□□□ -0.03
GACAT3-201ENST00000426539 SPATA31A3Q5VYP0 1347 aa14.85□□□□□ -0.03
GACAT3-201ENST00000426539 BCL9LQ86UU0 1499 aa14.84□□□□□ -0.03
GACAT3-201ENST00000426539 ADGRB1O14514 1584 aa14.83□□□□□ -0.04
GACAT3-201ENST00000426539 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.04
GACAT3-201ENST00000426539 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
GACAT3-201ENST00000426539 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
GACAT3-201ENST00000426539 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
GACAT3-201ENST00000426539 KIF1AQ12756 1690 aa14.81□□□□□ -0.04
GACAT3-201ENST00000426539 HRCP23327 699 aa14.79□□□□□ -0.04
GACAT3-201ENST00000426539 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
GACAT3-201ENST00000426539 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
GACAT3-201ENST00000426539 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
GACAT3-201ENST00000426539 SLIT2O94813 1529 aa14.78□□□□□ -0.04
GACAT3-201ENST00000426539 TNS3Q68CZ2 1445 aa14.78□□□□□ -0.04
GACAT3-201ENST00000426539 POGKQ9P215 609 aa14.78□□□□□ -0.04
GACAT3-201ENST00000426539 ANKARQ7Z5J8 1434 aa14.77□□□□□ -0.04
GACAT3-201ENST00000426539 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
GACAT3-201ENST00000426539 GJD4Q96KN9 370 aaPredicted RBP14.77□□□□□ -0.05
GACAT3-201ENST00000426539 RGPD8O14715 1765 aaPredicted RBP14.77□□□□□ -0.05
GACAT3-201ENST00000426539 MARF1Q9Y4F3 1742 aaKnown RBP14.77□□□□□ -0.05
GACAT3-201ENST00000426539 USP32Q8NFA0 1604 aa14.77□□□□□ -0.05
GACAT3-201ENST00000426539 ADGRB2O60241 1585 aa14.77□□□□□ -0.05
GACAT3-201ENST00000426539 SBNO1A3KN83 1393 aa14.76□□□□□ -0.05
GACAT3-201ENST00000426539 ATAD2Q6PL18 1390 aa14.76□□□□□ -0.05
GACAT3-201ENST00000426539 PRR36Q9H6K5 1346 aa14.76□□□□□ -0.05
GACAT3-201ENST00000426539 PSME1Q06323 249 aa14.76□□□□□ -0.05
GACAT3-201ENST00000426539 UNC5CLQ8IV45 518 aa14.76□□□□□ -0.05
GACAT3-201ENST00000426539 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
GACAT3-201ENST00000426539 HIRIP3Q9BW71 556 aaPredicted RBP14.76□□□□□ -0.05
GACAT3-201ENST00000426539 MINK1Q8N4C8 1332 aaPredicted RBP14.75□□□□□ -0.05
GACAT3-201ENST00000426539 RALGAPBQ86X10 1494 aa14.74□□□□□ -0.05
GACAT3-201ENST00000426539 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
GACAT3-201ENST00000426539 STAC3Q96MF2 364 aa14.73□□□□□ -0.05
GACAT3-201ENST00000426539 GLI3P10071 1580 aa14.73□□□□□ -0.05
GACAT3-201ENST00000426539 WASLO00401 505 aaPredicted RBP14.72□□□□□ -0.05
GACAT3-201ENST00000426539 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.72□□□□□ -0.05
GACAT3-201ENST00000426539 ARHGEF10O15013 1369 aa14.72□□□□□ -0.05
GACAT3-201ENST00000426539 LMOD2Q6P5Q4 547 aa14.71□□□□□ -0.05
GACAT3-201ENST00000426539 TULP4Q9NRJ4 1543 aa14.71□□□□□ -0.06
GACAT3-201ENST00000426539 FAM83GA6ND36 823 aa14.7□□□□□ -0.06
GACAT3-201ENST00000426539 HAP1P54257 671 aaPredicted RBP14.7□□□□□ -0.06
GACAT3-201ENST00000426539 TRPM3Q9HCF6 1732 aaPredicted RBP14.69□□□□□ -0.06
GACAT3-201ENST00000426539 VPS72Q15906 364 aa14.69□□□□□ -0.06
GACAT3-201ENST00000426539 ABCA3Q99758 1704 aa14.69□□□□□ -0.06
GACAT3-201ENST00000426539 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
GACAT3-201ENST00000426539 ONECUT3O60422 494 aaPredicted RBP14.67□□□□□ -0.06
GACAT3-201ENST00000426539 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
GACAT3-201ENST00000426539 ATP7BP35670 1465 aa14.66□□□□□ -0.06
GACAT3-201ENST00000426539 SEPT12Q8IYM1 358 aa14.66□□□□□ -0.06
GACAT3-201ENST00000426539 ARHGEF28Q8N1W1 1705 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms