RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 MADDQ8WXG6 1647 aa4.03□□□□□ -1.77
LINC00407-201ENST00000426509 RAB3GAP2Q9H2M9 1393 aa4.02□□□□□ -1.77
LINC00407-201ENST00000426509 PRSS12P56730 875 aa4.02□□□□□ -1.77
LINC00407-201ENST00000426509 FMN1Q68DA7 1419 aa4.02□□□□□ -1.77
LINC00407-201ENST00000426509 UACAQ9BZF9 1416 aa4.02□□□□□ -1.77
LINC00407-201ENST00000426509 SETD5Q9C0A6 1442 aa4.02□□□□□ -1.77
LINC00407-201ENST00000426509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC00407-201ENST00000426509 KIAA0586Q9BVV6 1533 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 KDM5BQ9UGL1 1544 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 ACIN1Q9UKV3 1341 aaKnown RBP4.01□□□□□ -1.77
LINC00407-201ENST00000426509 UHRF1BP1LA0JNW5 1464 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 TESPA1A2RU30 521 aaPredicted RBP4.01□□□□□ -1.77
LINC00407-201ENST00000426509 NEUROD1Q13562 356 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 MRPL50Q8N5N7 158 aaKnown RBP4.01□□□□□ -1.77
LINC00407-201ENST00000426509 TTC13Q8NBP0 860 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 CDCA7LQ96GN5 454 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 PLA2G2EQ9NZK7 142 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 HCSTQ9UBK5 93 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 CD109Q6YHK3 1445 aa4.01□□□□□ -1.77
LINC00407-201ENST00000426509 MAGI3Q5TCQ9 1506 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 EHBP1L1Q8N3D4 1523 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 LTBP4Q8N2S1 1624 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 CEBPAP49715 358 aaPredicted RBP4□□□□□ -1.77
LINC00407-201ENST00000426509 THSD4Q6ZMP0 1018 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 LAPTM4BQ86VI4 370 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 ZFRQ96KR1 1074 aaKnown RBP4□□□□□ -1.77
LINC00407-201ENST00000426509 STAC3Q96MF2 364 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 SEPT9Q9UHD8 586 aaPredicted RBP4□□□□□ -1.77
LINC00407-201ENST00000426509 FGD6Q6ZV73 1430 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 IQGAP2Q13576 1575 aa4□□□□□ -1.77
LINC00407-201ENST00000426509 ARID4BQ4LE39 1312 aaPredicted RBP3.99□□□□□ -1.77
LINC00407-201ENST00000426509 PTPRKQ15262 1439 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 SMAPO00193 183 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 PRKCSHP14314 528 aaPredicted RBP3.99□□□□□ -1.77
LINC00407-201ENST00000426509 HSPA1LP34931 641 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 ITGAEP38570 1179 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 PTPN5P54829 565 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 WNT2BQ93097 391 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 NBPF3Q9H094 633 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 RGS17Q9UGC6 210 aaPredicted RBP3.99□□□□□ -1.77
LINC00407-201ENST00000426509 UGGT2Q9NYU1 1516 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 HECW1Q76N89 1606 aa3.99□□□□□ -1.77
LINC00407-201ENST00000426509 NCOA2Q15596 1464 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 WDR7Q9Y4E6 1490 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 BCORL1Q5H9F3 1711 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 MED1Q15648 1581 aaPredicted RBP3.98□□□□□ -1.77
LINC00407-201ENST00000426509 MYOM3Q5VTT5 1437 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 YEATS2Q9ULM3 1422 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 PTGDRQ13258 359 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 MLECQ14165 292 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 FAM98CQ17RN3 349 aaKnown RBP3.98□□□□□ -1.77
LINC00407-201ENST00000426509 PACS2Q86VP3 889 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 TATDN2Q93075 761 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 ARAP3Q8WWN8 1544 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 DISP1Q96F81 1524 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 ZCCHC11Q5TAX3 1644 aaKnown RBP3.98□□□□□ -1.77
LINC00407-201ENST00000426509 PTPN23Q9H3S7 1636 aa3.98□□□□□ -1.77
LINC00407-201ENST00000426509 SUPT6HQ7KZ85 1726 aaKnown RBP3.98□□□□□ -1.77
LINC00407-201ENST00000426509 TCOF1Q13428 1488 aaKnown RBP3.98□□□□□ -1.77
LINC00407-201ENST00000426509 RIMS1Q86UR5 1692 aaKnown RBP3.97□□□□□ -1.77
LINC00407-201ENST00000426509 HFM1A2PYH4 1435 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 KIAA0556O60303 1618 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 SOWAHBA6NEL2 793 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 GOLGA8CPA6NN73 597 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 UBAP1LF5GYI3 381 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 RGS20O76081 388 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 BCAMP50895 628 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 FAM50AQ14320 339 aaKnown RBP3.97□□□□□ -1.77
LINC00407-201ENST00000426509 TPRNQ4KMQ1 711 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 RBM26Q5T8P6 1007 aaKnown RBP3.97□□□□□ -1.77
LINC00407-201ENST00000426509 PADI6Q6TGC4 694 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 EYA1Q99502 592 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 RBM27Q9P2N5 1060 aaKnown RBP3.97□□□□□ -1.77
LINC00407-201ENST00000426509 SIGLEC1Q9BZZ2 1709 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 MTUS2Q5JR59 1369 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 CCDC18Q5T9S5 1454 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 FRMPD1Q5SYB0 1578 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 STRCQ7RTU9 1775 aa3.97□□□□□ -1.77
LINC00407-201ENST00000426509 NAIPQ13075 1403 aa3.96□□□□□ -1.77
LINC00407-201ENST00000426509 CDK13Q14004 1512 aaKnown RBP3.96□□□□□ -1.78
LINC00407-201ENST00000426509 ARID3CA6NKF2 412 aa3.96□□□□□ -1.78
LINC00407-201ENST00000426509 GPR37O15354 613 aa3.96□□□□□ -1.78
LINC00407-201ENST00000426509 CENPBP07199 599 aaPredicted RBP3.96□□□□□ -1.78
LINC00407-201ENST00000426509 LMOD2Q6P5Q4 547 aa3.96□□□□□ -1.78
LINC00407-201ENST00000426509 NUDT18Q6ZVK8 323 aa3.96□□□□□ -1.78
LINC00407-201ENST00000426509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.96□□□□□ -1.78
LINC00407-201ENST00000426509 ANKK1Q8NFD2 765 aa3.96□□□□□ -1.78
LINC00407-201ENST00000426509 PNMA3Q9UL41 463 aa3.96□□□□□ -1.78
LINC00407-201ENST00000426509 ATP1B4Q9UN42 357 aaPredicted RBP3.96□□□□□ -1.78
LINC00407-201ENST00000426509 ZNF335Q9H4Z2 1342 aaPredicted RBP3.95□□□□□ -1.78
LINC00407-201ENST00000426509 AKNAQ7Z591 1439 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 GCC2Q8IWJ2 1684 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 NUTM2FA1L443 756 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 FECHP22830 423 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 SIN3AQ96ST3 1273 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 WBP1LQ9NX94 342 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 PTPRTO14522 1441 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 CARMIL2Q6F5E8 1435 aa3.95□□□□□ -1.78
LINC00407-201ENST00000426509 DENND4BO75064 1496 aaPredicted RBP3.94□□□□□ -1.78
LINC00407-201ENST00000426509 NUP153P49790 1475 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms