RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 KIF1BO60333 1816 aa22.14■■□□□ 1.13
PDAP1-202ENST00000426447 ATRNO75882 1429 aa22.14■■□□□ 1.13
PDAP1-202ENST00000426447 XPCQ01831 940 aaPredicted RBP22.13■■□□□ 1.13
PDAP1-202ENST00000426447 LAMC1P11047 1609 aa22.13■■□□□ 1.13
PDAP1-202ENST00000426447 GJD4Q96KN9 370 aaPredicted RBP22.11■■□□□ 1.13
PDAP1-202ENST00000426447 SLC4A1APQ9BWU0 796 aaKnown RBP22.11■■□□□ 1.13
PDAP1-202ENST00000426447 NUTM2FA1L443 756 aa22.1■■□□□ 1.13
PDAP1-202ENST00000426447 LRPPRCP42704 1394 aaKnown RBP22.1■■□□□ 1.13
PDAP1-202ENST00000426447 STK26Q9P289 416 aa22.09■■□□□ 1.13
PDAP1-202ENST00000426447 NAIPQ13075 1403 aa22.08■■□□□ 1.13
PDAP1-202ENST00000426447 BCL9LQ86UU0 1499 aa22.08■■□□□ 1.12
PDAP1-202ENST00000426447 PRAG1Q86YV5 1406 aa22.06■■□□□ 1.12
PDAP1-202ENST00000426447 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
PDAP1-202ENST00000426447 MYOM2P54296 1465 aa22.06■■□□□ 1.12
PDAP1-202ENST00000426447 COL22A1Q8NFW1 1626 aaPredicted RBP22.06■■□□□ 1.12
PDAP1-202ENST00000426447 UNC5CLQ8IV45 518 aa22.04■■□□□ 1.12
PDAP1-202ENST00000426447 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
PDAP1-202ENST00000426447 PXDNQ92626 1479 aa22.03■■□□□ 1.12
PDAP1-202ENST00000426447 HAP1P54257 671 aaPredicted RBP22.02■■□□□ 1.12
PDAP1-202ENST00000426447 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
PDAP1-202ENST00000426447 CDC42BPGQ6DT37 1551 aa22■■□□□ 1.11
PDAP1-202ENST00000426447 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
PDAP1-202ENST00000426447 SRCAPQ6ZRS2 3230 aa22■■□□□ 1.11
PDAP1-202ENST00000426447 TMEM132EQ6IEE7 984 aa21.99■■□□□ 1.11
PDAP1-202ENST00000426447 KRT28Q7Z3Y7 464 aa21.99■■□□□ 1.11
PDAP1-202ENST00000426447 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
PDAP1-202ENST00000426447 PLEKHG5O94827 1062 aa21.98■■□□□ 1.11
PDAP1-202ENST00000426447 RRBP1Q9P2E9 1410 aaKnown RBP21.97■■□□□ 1.11
PDAP1-202ENST00000426447 BLMP54132 1417 aaPredicted RBP21.97■■□□□ 1.11
PDAP1-202ENST00000426447 CCDC9Q9Y3X0 531 aaKnown RBP21.96■■□□□ 1.11
PDAP1-202ENST00000426447 PPLO60437 1756 aa21.96■■□□□ 1.11
PDAP1-202ENST00000426447 RALGAPBQ86X10 1494 aa21.96■■□□□ 1.11
PDAP1-202ENST00000426447 PSME1Q06323 249 aa21.95■■□□□ 1.1
PDAP1-202ENST00000426447 DEFB132Q7Z7B7 95 aa21.95■■□□□ 1.1
PDAP1-202ENST00000426447 SEPT12Q8IYM1 358 aa21.95■■□□□ 1.1
PDAP1-202ENST00000426447 ABCC11Q96J66 1382 aa21.95■■□□□ 1.1
PDAP1-202ENST00000426447 PLEKHH1Q9ULM0 1364 aa21.94■■□□□ 1.1
PDAP1-202ENST00000426447 CCDC144AA2RUR9 1427 aa21.93■■□□□ 1.1
PDAP1-202ENST00000426447 LMOD2Q6P5Q4 547 aa21.93■■□□□ 1.1
PDAP1-202ENST00000426447 ANKRD30BQ9BXX2 1392 aa21.93■■□□□ 1.1
PDAP1-202ENST00000426447 MARF1Q9Y4F3 1742 aaKnown RBP21.93■■□□□ 1.1
PDAP1-202ENST00000426447 SLIT2O94813 1529 aa21.92■■□□□ 1.1
PDAP1-202ENST00000426447 TECPR2O15040 1411 aa21.92■■□□□ 1.1
PDAP1-202ENST00000426447 CABLES1Q8TDN4 633 aa21.92■■□□□ 1.1
PDAP1-202ENST00000426447 VPS72Q15906 364 aa21.91■■□□□ 1.1
PDAP1-202ENST00000426447 PHF8Q9UPP1 1060 aa21.91■■□□□ 1.1
PDAP1-202ENST00000426447 GLI3P10071 1580 aa21.89■■□□□ 1.09
PDAP1-202ENST00000426447 EP400Q96L91 3159 aa21.88■■□□□ 1.09
PDAP1-202ENST00000426447 A0A0G2JS52 829 aa21.88■■□□□ 1.09
PDAP1-202ENST00000426447 MYT1Q01538 1121 aa21.88■■□□□ 1.09
PDAP1-202ENST00000426447 KRT27Q7Z3Y8 459 aa21.88■■□□□ 1.09
PDAP1-202ENST00000426447 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.87■■□□□ 1.09
PDAP1-202ENST00000426447 SIRT1Q96EB6 747 aa21.87■■□□□ 1.09
PDAP1-202ENST00000426447 YTHDC2Q9H6S0 1430 aaKnown RBP21.87■■□□□ 1.09
PDAP1-202ENST00000426447 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
PDAP1-202ENST00000426447 ONECUT3O60422 494 aaPredicted RBP21.85■■□□□ 1.09
PDAP1-202ENST00000426447 TNS3Q68CZ2 1445 aa21.84■■□□□ 1.09
PDAP1-202ENST00000426447 SPATA31E1Q6ZUB1 1445 aa21.84■■□□□ 1.09
PDAP1-202ENST00000426447 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
PDAP1-202ENST00000426447 KIF1AQ12756 1690 aa21.84■■□□□ 1.09
PDAP1-202ENST00000426447 USP32Q8NFA0 1604 aa21.84■■□□□ 1.09
PDAP1-202ENST00000426447 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.08
PDAP1-202ENST00000426447 PIK3C2GO75747 1445 aa21.82■■□□□ 1.08
PDAP1-202ENST00000426447 FAM83GA6ND36 823 aa21.82■■□□□ 1.08
PDAP1-202ENST00000426447 BAG6P46379 1132 aa21.82■■□□□ 1.08
PDAP1-202ENST00000426447 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
PDAP1-202ENST00000426447 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
PDAP1-202ENST00000426447 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
PDAP1-202ENST00000426447 SBNO1A3KN83 1393 aa21.81■■□□□ 1.08
PDAP1-202ENST00000426447 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
PDAP1-202ENST00000426447 CFAP70Q5T0N1 1121 aa21.8■■□□□ 1.08
PDAP1-202ENST00000426447 PRAM1Q96QH2 718 aa21.8■■□□□ 1.08
PDAP1-202ENST00000426447 POGKQ9P215 609 aa21.8■■□□□ 1.08
PDAP1-202ENST00000426447 PSDA5PKW4 1024 aaPredicted RBP21.79■■□□□ 1.08
PDAP1-202ENST00000426447 FAM98CQ17RN3 349 aaKnown RBP21.79■■□□□ 1.08
PDAP1-202ENST00000426447 BRWD3Q6RI45 1802 aa21.78■■□□□ 1.08
PDAP1-202ENST00000426447 KNDC1Q76NI1 1749 aa21.78■■□□□ 1.08
PDAP1-202ENST00000426447 BTG4Q9NY30 223 aa21.77■■□□□ 1.08
PDAP1-202ENST00000426447 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
PDAP1-202ENST00000426447 IFT172Q9UG01 1749 aa21.73■■□□□ 1.07
PDAP1-202ENST00000426447 HRCP23327 699 aa21.73■■□□□ 1.07
PDAP1-202ENST00000426447 EN1Q05925 392 aaPredicted RBP21.72■■□□□ 1.07
PDAP1-202ENST00000426447 PLCH1Q4KWH8 1693 aa21.72■■□□□ 1.07
PDAP1-202ENST00000426447 GPRASP1Q5JY77 1395 aa21.72■■□□□ 1.07
PDAP1-202ENST00000426447 NWD2Q9ULI1 1742 aa21.72■■□□□ 1.07
PDAP1-202ENST00000426447 RGPD8O14715 1765 aaPredicted RBP21.71■■□□□ 1.07
PDAP1-202ENST00000426447 FAM182BQ5T319 152 aa21.71■■□□□ 1.07
PDAP1-202ENST00000426447 HIRIP3Q9BW71 556 aaPredicted RBP21.7■■□□□ 1.06
PDAP1-202ENST00000426447 PAK3O75914 559 aaPredicted RBP21.69■■□□□ 1.06
PDAP1-202ENST00000426447 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
PDAP1-202ENST00000426447 ANKARQ7Z5J8 1434 aa21.68■■□□□ 1.06
PDAP1-202ENST00000426447 R3HDM1Q15032 1099 aaKnown RBP21.67■■□□□ 1.06
PDAP1-202ENST00000426447 NGDNQ8NEJ9 315 aaKnown RBP21.67■■□□□ 1.06
PDAP1-202ENST00000426447 LRP5O75197 1615 aa21.66■■□□□ 1.06
PDAP1-202ENST00000426447 MINK1Q8N4C8 1332 aaPredicted RBP21.66■■□□□ 1.06
PDAP1-202ENST00000426447 ACIN1Q9UKV3 1341 aaKnown RBP21.66■■□□□ 1.06
PDAP1-202ENST00000426447 SPATA31A5Q5VU36 1347 aa21.65■■□□□ 1.06
PDAP1-202ENST00000426447 SPATA31A7Q8IWB4 1347 aa21.65■■□□□ 1.06
PDAP1-202ENST00000426447 PRDM11Q9NQV5 511 aa21.65■■□□□ 1.06
PDAP1-202ENST00000426447 ABCA3Q99758 1704 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms