RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 TBC1D32Q96NH3 1257 aa17.14■□□□□ 0.33
LRCH3-203ENST00000425562 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
LRCH3-203ENST00000425562 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
LRCH3-203ENST00000425562 PTPRTO14522 1441 aa17.13■□□□□ 0.33
LRCH3-203ENST00000425562 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
LRCH3-203ENST00000425562 CEP152O94986 1710 aa17.12■□□□□ 0.33
LRCH3-203ENST00000425562 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
LRCH3-203ENST00000425562 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
LRCH3-203ENST00000425562 MYOM1P52179 1685 aa17.11■□□□□ 0.33
LRCH3-203ENST00000425562 SYNMO15061 1565 aa17.11■□□□□ 0.33
LRCH3-203ENST00000425562 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
LRCH3-203ENST00000425562 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
LRCH3-203ENST00000425562 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
LRCH3-203ENST00000425562 ERVK-7P63135 1459 aa17.11■□□□□ 0.33
LRCH3-203ENST00000425562 NOS1P29475 1434 aa17.1■□□□□ 0.33
LRCH3-203ENST00000425562 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
LRCH3-203ENST00000425562 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
LRCH3-203ENST00000425562 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
LRCH3-203ENST00000425562 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
LRCH3-203ENST00000425562 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
LRCH3-203ENST00000425562 PIK3C2GO75747 1445 aa17.08■□□□□ 0.32
LRCH3-203ENST00000425562 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.32
LRCH3-203ENST00000425562 KDM5AP29375 1690 aaKnown RBP17.07■□□□□ 0.32
LRCH3-203ENST00000425562 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
LRCH3-203ENST00000425562 ARID3AQ99856 593 aa17.07■□□□□ 0.32
LRCH3-203ENST00000425562 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
LRCH3-203ENST00000425562 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
LRCH3-203ENST00000425562 NSD3Q9BZ95 1437 aa17.07■□□□□ 0.32
LRCH3-203ENST00000425562 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
LRCH3-203ENST00000425562 FTSJ3Q8IY81 847 aaKnown RBP17.07■□□□□ 0.32
LRCH3-203ENST00000425562 TET3O43151 1660 aa17.06■□□□□ 0.32
LRCH3-203ENST00000425562 INSRP06213 1382 aa17.06■□□□□ 0.32
LRCH3-203ENST00000425562 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
LRCH3-203ENST00000425562 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
LRCH3-203ENST00000425562 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
LRCH3-203ENST00000425562 STK26Q9P289 416 aa17.05■□□□□ 0.32
LRCH3-203ENST00000425562 GRPEL1Q9HAV7 217 aa17.04■□□□□ 0.32
LRCH3-203ENST00000425562 FSD2A1L4K1 749 aa17.04■□□□□ 0.32
LRCH3-203ENST00000425562 MTHFSP49914 203 aa17.04■□□□□ 0.32
LRCH3-203ENST00000425562 GLIPR1L2Q4G1C9 344 aa17.04■□□□□ 0.32
LRCH3-203ENST00000425562 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
LRCH3-203ENST00000425562 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
LRCH3-203ENST00000425562 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
LRCH3-203ENST00000425562 TRIM44Q96DX7 344 aaPredicted RBP17.03■□□□□ 0.32
LRCH3-203ENST00000425562 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
LRCH3-203ENST00000425562 CLCN1P35523 988 aa17.03■□□□□ 0.32
LRCH3-203ENST00000425562 ITPRIPQ8IWB1 547 aa17.03■□□□□ 0.32
LRCH3-203ENST00000425562 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
LRCH3-203ENST00000425562 ASXL2Q76L83 1435 aa17.02■□□□□ 0.32
LRCH3-203ENST00000425562 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.32
LRCH3-203ENST00000425562 ESPNB1AK53 854 aa17.02■□□□□ 0.31
LRCH3-203ENST00000425562 HSCBQ8IWL3 235 aa17.02■□□□□ 0.31
LRCH3-203ENST00000425562 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
LRCH3-203ENST00000425562 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
LRCH3-203ENST00000425562 RAPGEF3O95398 923 aa17.01■□□□□ 0.31
LRCH3-203ENST00000425562 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
LRCH3-203ENST00000425562 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
LRCH3-203ENST00000425562 KIF1BO60333 1816 aa17■□□□□ 0.31
LRCH3-203ENST00000425562 MROH1Q8NDA8 1641 aa17■□□□□ 0.31
LRCH3-203ENST00000425562 LNPKQ9C0E8 428 aa17■□□□□ 0.31
LRCH3-203ENST00000425562 MRE11P49959 708 aa16.99■□□□□ 0.31
LRCH3-203ENST00000425562 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
LRCH3-203ENST00000425562 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■□□ 16.5
LRCH3-203ENST00000425562 PPRC1Q5VV67 1664 aaKnown RBP16.99■□□□□ 0.31
LRCH3-203ENST00000425562 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
LRCH3-203ENST00000425562 NPC1L1Q9UHC9 1359 aa16.98■□□□□ 0.31
LRCH3-203ENST00000425562 HSP90AB1P08238 724 aaKnown RBP16.98■□□□□ 0.31
LRCH3-203ENST00000425562 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
LRCH3-203ENST00000425562 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
LRCH3-203ENST00000425562 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRCH3-203ENST00000425562 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
LRCH3-203ENST00000425562 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.31
LRCH3-203ENST00000425562 U2SURPO15042 1029 aaKnown RBP16.96■□□□□ 0.31
LRCH3-203ENST00000425562 VWDEQ8N2E2 1590 aa16.96■□□□□ 0.31
LRCH3-203ENST00000425562 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
LRCH3-203ENST00000425562 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
LRCH3-203ENST00000425562 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
LRCH3-203ENST00000425562 NPATQ14207 1427 aa16.95■□□□□ 0.3
LRCH3-203ENST00000425562 EFCAB6Q5THR3 1501 aa16.95■□□□□ 0.3
LRCH3-203ENST00000425562 KIDINS220Q9ULH0 1771 aa16.95■□□□□ 0.3
LRCH3-203ENST00000425562 CD2BP2O95400 341 aaKnown RBP16.95■□□□□ 0.3
LRCH3-203ENST00000425562 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
LRCH3-203ENST00000425562 GGNBP2Q9H3C7 697 aa16.95■□□□□ 0.3
LRCH3-203ENST00000425562 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
LRCH3-203ENST00000425562 MYOM2P54296 1465 aa16.94■□□□□ 0.3
LRCH3-203ENST00000425562 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
LRCH3-203ENST00000425562 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
LRCH3-203ENST00000425562 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
LRCH3-203ENST00000425562 C1orf115Q9H7X2 142 aa16.93■□□□□ 0.3
LRCH3-203ENST00000425562 POLR3AO14802 1390 aaPredicted RBP16.93■□□□□ 0.3
LRCH3-203ENST00000425562 TRIM27P14373 513 aa16.92■□□□□ 0.3
LRCH3-203ENST00000425562 FBLN1P23142 703 aa16.92■□□□□ 0.3
LRCH3-203ENST00000425562 MINK1Q8N4C8 1332 aaPredicted RBP16.91■□□□□ 0.3
LRCH3-203ENST00000425562 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
LRCH3-203ENST00000425562 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
LRCH3-203ENST00000425562 DDX11L8A8MPP1 907 aa16.9■□□□□ 0.3
LRCH3-203ENST00000425562 CFAP53Q96M91 514 aa16.9■□□□□ 0.3
LRCH3-203ENST00000425562 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
LRCH3-203ENST00000425562 RRP9O43818 475 aaKnown RBP16.9■□□□□ 0.3
LRCH3-203ENST00000425562 SSH1Q8WYL5 1049 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms