RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 EVC2Q86UK5 1308 aa20.56■□□□□ 0.88
CALD1-206ENST00000424922 PTPRUQ92729 1446 aa20.55■□□□□ 0.88
CALD1-206ENST00000424922 PANK3Q9H999 370 aa20.54■□□□□ 0.88
CALD1-206ENST00000424922 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
CALD1-206ENST00000424922 SIRT1Q96EB6 747 aa20.53■□□□□ 0.88
CALD1-206ENST00000424922 ROBO2Q9HCK4 1378 aa20.52■□□□□ 0.88
CALD1-206ENST00000424922 AMOTL2Q9Y2J4 779 aa20.52■□□□□ 0.88
CALD1-206ENST00000424922 NCKAP5LQ9HCH0 1330 aa20.52■□□□□ 0.88
CALD1-206ENST00000424922 CHD2O14647 1828 aaKnown RBP20.51■□□□□ 0.87
CALD1-206ENST00000424922 NPHP4O75161 1426 aaPredicted RBP20.51■□□□□ 0.87
CALD1-206ENST00000424922 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
CALD1-206ENST00000424922 CABP2Q9NPB3 220 aa20.51■□□□□ 0.87
CALD1-206ENST00000424922 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
CALD1-206ENST00000424922 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
CALD1-206ENST00000424922 PER1O15534 1290 aaPredicted RBP20.49■□□□□ 0.87
CALD1-206ENST00000424922 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
CALD1-206ENST00000424922 PRKRIP1Q9H875 184 aaPredicted RBP20.49■□□□□ 0.87
CALD1-206ENST00000424922 PUS7Q96PZ0 661 aaKnown RBP20.48■□□□□ 0.87
CALD1-206ENST00000424922 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
CALD1-206ENST00000424922 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.48■□□□□ 0.87
CALD1-206ENST00000424922 HSPA2P54652 639 aa20.47■□□□□ 0.87
CALD1-206ENST00000424922 TMC1Q8TDI8 760 aa20.47■□□□□ 0.87
CALD1-206ENST00000424922 CDK19Q9BWU1 502 aa20.47■□□□□ 0.87
CALD1-206ENST00000424922 LMTK3Q96Q04 1460 aa20.45■□□□□ 0.86
CALD1-206ENST00000424922 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
CALD1-206ENST00000424922 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.86
CALD1-206ENST00000424922 KCNA6P17658 529 aa20.44■□□□□ 0.86
CALD1-206ENST00000424922 ERICH6Q7L0X2 663 aa20.44■□□□□ 0.86
CALD1-206ENST00000424922 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
CALD1-206ENST00000424922 KNSTRNQ9Y448 316 aa20.42■□□□□ 0.86
CALD1-206ENST00000424922 ATAD2Q6PL18 1390 aa20.41■□□□□ 0.86
CALD1-206ENST00000424922 ADGRB2O60241 1585 aa20.41■□□□□ 0.86
CALD1-206ENST00000424922 KTN1Q86UP2 1357 aaKnown RBP20.39■□□□□ 0.85
CALD1-206ENST00000424922 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
CALD1-206ENST00000424922 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
CALD1-206ENST00000424922 STRCQ7RTU9 1775 aa20.39■□□□□ 0.85
CALD1-206ENST00000424922 NINLQ9Y2I6 1382 aa20.37■□□□□ 0.85
CALD1-206ENST00000424922 RALBP1Q15311 655 aa20.36■□□□□ 0.85
CALD1-206ENST00000424922 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
CALD1-206ENST00000424922 ANKRD36BQ8N2N9 1353 aa20.36■□□□□ 0.85
CALD1-206ENST00000424922 AMER1Q5JTC6 1135 aaPredicted RBP20.35■□□□□ 0.85
CALD1-206ENST00000424922 CABP1Q9NZU7 370 aa20.35■□□□□ 0.85
CALD1-206ENST00000424922 NSD3Q9BZ95 1437 aa20.34■□□□□ 0.85
CALD1-206ENST00000424922 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
CALD1-206ENST00000424922 CCDC184Q52MB2 194 aa20.34■□□□□ 0.85
CALD1-206ENST00000424922 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
CALD1-206ENST00000424922 NUDT16Q96DE0 195 aaKnown RBP20.33■□□□□ 0.85
CALD1-206ENST00000424922 RGPD8O14715 1765 aaPredicted RBP20.33■□□□□ 0.84
CALD1-206ENST00000424922 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.84
CALD1-206ENST00000424922 A0A1W2PP64 1363 aa20.32■□□□□ 0.84
CALD1-206ENST00000424922 CD163L1Q9NR16 1453 aa20.32■□□□□ 0.84
CALD1-206ENST00000424922 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
CALD1-206ENST00000424922 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
CALD1-206ENST00000424922 ATP7BP35670 1465 aa20.31■□□□□ 0.84
CALD1-206ENST00000424922 TERF2IPQ9NYB0 399 aa20.31■□□□□ 0.84
CALD1-206ENST00000424922 MYBBP1AQ9BQG0 1328 aaKnown RBP20.31■□□□□ 0.84
CALD1-206ENST00000424922 PRR36Q9H6K5 1346 aa20.31■□□□□ 0.84
CALD1-206ENST00000424922 USP32Q8NFA0 1604 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 NUTM2FA1L443 756 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 BCL11AQ9H165 835 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 STRCP1A6NGW2 1772 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 NPC1L1Q9UHC9 1359 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 CCDC61Q9Y6R9 512 aa20.3■□□□□ 0.84
CALD1-206ENST00000424922 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
CALD1-206ENST00000424922 ITSN1Q15811 1721 aa20.29■□□□□ 0.84
CALD1-206ENST00000424922 HDGFL2Q7Z4V5 671 aaPredicted RBP20.29■□□□□ 0.84
CALD1-206ENST00000424922 FMN2Q9NZ56 1722 aa20.28■□□□□ 0.84
CALD1-206ENST00000424922 AKAP12Q02952 1782 aa20.27■□□□□ 0.84
CALD1-206ENST00000424922 CGNL1Q0VF96 1302 aa20.26■□□□□ 0.83
CALD1-206ENST00000424922 CDC42BPGQ6DT37 1551 aa20.26■□□□□ 0.83
CALD1-206ENST00000424922 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
CALD1-206ENST00000424922 NKTRP30414 1462 aaKnown RBP20.25■□□□□ 0.83
CALD1-206ENST00000424922 ADGRL3Q9HAR2 1447 aa20.24■□□□□ 0.83
CALD1-206ENST00000424922 C14orf37Q86TY3 774 aa20.24■□□□□ 0.83
CALD1-206ENST00000424922 MON2Q7Z3U7 1717 aa20.24■□□□□ 0.83
CALD1-206ENST00000424922 KIF20BQ96Q89 1820 aa20.23■□□□□ 0.83
CALD1-206ENST00000424922 CPSF1Q10570 1443 aaKnown RBP20.23■□□□□ 0.83
CALD1-206ENST00000424922 NLRP13Q86W25 1043 aa20.23■□□□□ 0.83
CALD1-206ENST00000424922 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
CALD1-206ENST00000424922 ANKRD26Q9UPS8 1709 aa20.21■□□□□ 0.83
CALD1-206ENST00000424922 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
CALD1-206ENST00000424922 ANKARQ7Z5J8 1434 aa20.2■□□□□ 0.82
CALD1-206ENST00000424922 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
CALD1-206ENST00000424922 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
CALD1-206ENST00000424922 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
CALD1-206ENST00000424922 NSD2O96028 1365 aa20.18■□□□□ 0.82
CALD1-206ENST00000424922 ACEP12821 1306 aa20.18■□□□□ 0.82
CALD1-206ENST00000424922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
CALD1-206ENST00000424922 FYB1O15117 783 aa20.17■□□□□ 0.82
CALD1-206ENST00000424922 PMFBP1Q8TBY8 1022 aa20.17■□□□□ 0.82
CALD1-206ENST00000424922 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
CALD1-206ENST00000424922 EDC4Q6P2E9 1401 aaKnown RBP20.17■□□□□ 0.82
CALD1-206ENST00000424922 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
CALD1-206ENST00000424922 GGNBP2Q9H3C7 697 aa20.17■□□□□ 0.82
CALD1-206ENST00000424922 TMEM94Q12767 1356 aa20.16■□□□□ 0.82
CALD1-206ENST00000424922 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
CALD1-206ENST00000424922 TNNT2P45379 298 aaPredicted RBP20.16■□□□□ 0.82
CALD1-206ENST00000424922 NRKQ7Z2Y5 1582 aa20.14■□□□□ 0.82
CALD1-206ENST00000424922 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms