RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
SCN2A-204ENST00000424833 USP32Q8NFA0 1604 aa11.12□□□□□ -0.63
SCN2A-204ENST00000424833 A2ML1A8K2U0 1454 aa11.11□□□□□ -0.63
SCN2A-204ENST00000424833 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
SCN2A-204ENST00000424833 SETD1AO15047 1707 aaKnown RBP11.11□□□□□ -0.63
SCN2A-204ENST00000424833 ALKQ9UM73 1620 aa11.1□□□□□ -0.63
SCN2A-204ENST00000424833 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
SCN2A-204ENST00000424833 SLC12A5Q9H2X9 1139 aa11.09□□□□□ -0.63
SCN2A-204ENST00000424833 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
SCN2A-204ENST00000424833 PPP4R2Q9NY27 417 aa11.09□□□□□ -0.63
SCN2A-204ENST00000424833 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
SCN2A-204ENST00000424833 YTHDC2Q9H6S0 1430 aaKnown RBP11.08□□□□□ -0.64
SCN2A-204ENST00000424833 NRXN3Q9Y4C0 1643 aa11.07□□□□□ -0.64
SCN2A-204ENST00000424833 SHPRHQ149N8 1683 aa11.07□□□□□ -0.64
SCN2A-204ENST00000424833 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
SCN2A-204ENST00000424833 MLECQ14165 292 aa11.07□□□□□ -0.64
SCN2A-204ENST00000424833 PDE3BQ13370 1112 aa11.06□□□□□ -0.64
SCN2A-204ENST00000424833 PUS7Q96PZ0 661 aaKnown RBP11.06□□□□□ -0.64
SCN2A-204ENST00000424833 ZNF521Q96K83 1311 aa11.06□□□□□ -0.64
SCN2A-204ENST00000424833 STK26Q9P289 416 aa11.05□□□□□ -0.64
SCN2A-204ENST00000424833 B4GALNT3Q6L9W6 998 aa11.05□□□□□ -0.64
SCN2A-204ENST00000424833 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
SCN2A-204ENST00000424833 ANKRD36BQ8N2N9 1353 aa11.05□□□□□ -0.64
SCN2A-204ENST00000424833 RIMS2Q9UQ26 1411 aa11.05□□□□□ -0.64
SCN2A-204ENST00000424833 CD163L1Q9NR16 1453 aa11.04□□□□□ -0.64
SCN2A-204ENST00000424833 SAFB2Q14151 953 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCN2A-204ENST00000424833 CABP2Q9NPB3 220 aa11.04□□□□□ -0.64
SCN2A-204ENST00000424833 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
SCN2A-204ENST00000424833 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
SCN2A-204ENST00000424833 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCN2A-204ENST00000424833 PRAM1Q96QH2 718 aa11.03□□□□□ -0.64
SCN2A-204ENST00000424833 DLC1Q96QB1 1528 aa11.03□□□□□ -0.64
SCN2A-204ENST00000424833 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
SCN2A-204ENST00000424833 RRP1P56182 461 aaKnown RBP11.02□□□□□ -0.64
SCN2A-204ENST00000424833 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.64
SCN2A-204ENST00000424833 NLRP1Q9C000 1473 aa11.01□□□□□ -0.65
SCN2A-204ENST00000424833 ABCC11Q96J66 1382 aa11.01□□□□□ -0.65
SCN2A-204ENST00000424833 UBR1Q8IWV7 1749 aa11□□□□□ -0.65
SCN2A-204ENST00000424833 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
SCN2A-204ENST00000424833 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
SCN2A-204ENST00000424833 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
SCN2A-204ENST00000424833 MINK1Q8N4C8 1332 aaPredicted RBP11□□□□□ -0.65
SCN2A-204ENST00000424833 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
SCN2A-204ENST00000424833 ANKRD26Q9UPS8 1709 aa10.99□□□□□ -0.65
SCN2A-204ENST00000424833 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
SCN2A-204ENST00000424833 MORC1Q86VD1 984 aa10.99□□□□□ -0.65
SCN2A-204ENST00000424833 NSD2O96028 1365 aa10.99□□□□□ -0.65
SCN2A-204ENST00000424833 METP08581 1390 aa10.99□□□□□ -0.65
SCN2A-204ENST00000424833 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
SCN2A-204ENST00000424833 DUSP27Q5VZP5 1158 aa10.98□□□□□ -0.65
SCN2A-204ENST00000424833 ATAD2Q6PL18 1390 aa10.98□□□□□ -0.65
SCN2A-204ENST00000424833 TNRQ92752 1358 aa10.98□□□□□ -0.65
SCN2A-204ENST00000424833 KNDC1Q76NI1 1749 aa10.98□□□□□ -0.65
SCN2A-204ENST00000424833 TNNT2P45379 298 aaPredicted RBP10.98□□□□□ -0.65
SCN2A-204ENST00000424833 SRPK2P78362 688 aaKnown RBP10.98□□□□□ -0.65
SCN2A-204ENST00000424833 APAF1O14727 1248 aa10.97□□□□□ -0.65
SCN2A-204ENST00000424833 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
SCN2A-204ENST00000424833 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
SCN2A-204ENST00000424833 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
SCN2A-204ENST00000424833 WAPLQ7Z5K2 1190 aa10.96□□□□□ -0.65
SCN2A-204ENST00000424833 TRMT2AQ8IZ69 625 aaKnown RBP10.96□□□□□ -0.65
SCN2A-204ENST00000424833 POGKQ9P215 609 aa10.96□□□□□ -0.65
SCN2A-204ENST00000424833 RBM19Q9Y4C8 960 aaKnown RBP10.96□□□□□ -0.65
SCN2A-204ENST00000424833 COL3A1P02461 1466 aaPredicted RBP10.96□□□□□ -0.65
SCN2A-204ENST00000424833 MED14O60244 1454 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 SLFN5Q08AF3 891 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 EXOC6Q8TAG9 804 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 CPS1P31327 1500 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 TECPR2O15040 1411 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 TMEM2Q9UHN6 1383 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 MTHFSP49914 203 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
SCN2A-204ENST00000424833 PLIN1O60240 522 aa10.94□□□□□ -0.66
SCN2A-204ENST00000424833 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
SCN2A-204ENST00000424833 C3P01024 1663 aa10.94□□□□□ -0.66
SCN2A-204ENST00000424833 ADGRB2O60241 1585 aa10.93□□□□□ -0.66
SCN2A-204ENST00000424833 ATP7BP35670 1465 aa10.93□□□□□ -0.66
SCN2A-204ENST00000424833 FYB1O15117 783 aa10.93□□□□□ -0.66
SCN2A-204ENST00000424833 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
SCN2A-204ENST00000424833 GGNBP2Q9H3C7 697 aa10.93□□□□□ -0.66
SCN2A-204ENST00000424833 ESF1Q9H501 851 aaKnown RBP10.93□□□□□ -0.66
SCN2A-204ENST00000424833 C20orf194Q5TEA3 1177 aa10.92□□□□□ -0.66
SCN2A-204ENST00000424833 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.92□□□□□ -0.66
SCN2A-204ENST00000424833 CABP1Q9NZU7 370 aa10.92□□□□□ -0.66
SCN2A-204ENST00000424833 FAM135BQ49AJ0 1406 aa10.91□□□□□ -0.66
SCN2A-204ENST00000424833 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
SCN2A-204ENST00000424833 NKTRP30414 1462 aaKnown RBP10.91□□□□□ -0.66
SCN2A-204ENST00000424833 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
SCN2A-204ENST00000424833 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
SCN2A-204ENST00000424833 CPSF1Q10570 1443 aaKnown RBP10.9□□□□□ -0.66
SCN2A-204ENST00000424833 TXNDC2Q86VQ3 553 aa10.9□□□□□ -0.66
SCN2A-204ENST00000424833 WWC1Q8IX03 1113 aa10.9□□□□□ -0.66
SCN2A-204ENST00000424833 ROBO2Q9HCK4 1378 aa10.9□□□□□ -0.67
SCN2A-204ENST00000424833 LTKP29376 864 aa10.89□□□□□ -0.67
SCN2A-204ENST00000424833 NGEFQ8N5V2 710 aa10.89□□□□□ -0.67
SCN2A-204ENST00000424833 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
SCN2A-204ENST00000424833 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
SCN2A-204ENST00000424833 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms