RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
LINC00839-201ENST00000424751 SLIT1O75093 1534 aa19.34■□□□□ 0.69
LINC00839-201ENST00000424751 NCKAP5LQ9HCH0 1330 aa19.34■□□□□ 0.69
LINC00839-201ENST00000424751 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
LINC00839-201ENST00000424751 ROBO2Q9HCK4 1378 aa19.33■□□□□ 0.68
LINC00839-201ENST00000424751 PLEKHG1Q9ULL1 1385 aa19.32■□□□□ 0.68
LINC00839-201ENST00000424751 AMER1Q5JTC6 1135 aaPredicted RBP19.31■□□□□ 0.68
LINC00839-201ENST00000424751 THEMISQ8N1K5 641 aaPredicted RBP19.31■□□□□ 0.68
LINC00839-201ENST00000424751 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
LINC00839-201ENST00000424751 SRPK2P78362 688 aaKnown RBP19.3■□□□□ 0.68
LINC00839-201ENST00000424751 FANCIQ9NVI1 1328 aa19.3■□□□□ 0.68
LINC00839-201ENST00000424751 MED14O60244 1454 aa19.3■□□□□ 0.68
LINC00839-201ENST00000424751 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
LINC00839-201ENST00000424751 CDK19Q9BWU1 502 aa19.29■□□□□ 0.68
LINC00839-201ENST00000424751 EID1Q9Y6B2 187 aa19.29■□□□□ 0.68
LINC00839-201ENST00000424751 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
LINC00839-201ENST00000424751 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
LINC00839-201ENST00000424751 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
LINC00839-201ENST00000424751 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
LINC00839-201ENST00000424751 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
LINC00839-201ENST00000424751 SETD1BQ9UPS6 1966 aaKnown RBP19.28■□□□□ 0.68
LINC00839-201ENST00000424751 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
LINC00839-201ENST00000424751 KTN1Q86UP2 1357 aaKnown RBP19.27■□□□□ 0.68
LINC00839-201ENST00000424751 HNRNPUQ00839 825 aaKnown RBP eCLIP19.26■□□□□ 0.67
LINC00839-201ENST00000424751 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
LINC00839-201ENST00000424751 ZNF142P52746 1687 aaPredicted RBP19.26■□□□□ 0.67
LINC00839-201ENST00000424751 KDM4FA0A1W2PPD8 638 aa19.26■□□□□ 0.67
LINC00839-201ENST00000424751 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
LINC00839-201ENST00000424751 AMOTL2Q9Y2J4 779 aa19.25■□□□□ 0.67
LINC00839-201ENST00000424751 DLC1Q96QB1 1528 aa19.24■□□□□ 0.67
LINC00839-201ENST00000424751 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
LINC00839-201ENST00000424751 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
LINC00839-201ENST00000424751 MYBBP1AQ9BQG0 1328 aaKnown RBP19.23■□□□□ 0.67
LINC00839-201ENST00000424751 TNNT2P45379 298 aaPredicted RBP19.22■□□□□ 0.67
LINC00839-201ENST00000424751 CD163L1Q9NR16 1453 aa19.22■□□□□ 0.67
LINC00839-201ENST00000424751 CPS1P31327 1500 aa19.22■□□□□ 0.67
LINC00839-201ENST00000424751 MSH5O43196 834 aa19.22■□□□□ 0.67
LINC00839-201ENST00000424751 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
LINC00839-201ENST00000424751 HSPA2P54652 639 aa19.21■□□□□ 0.67
LINC00839-201ENST00000424751 A0A1W2PP64 1363 aa19.21■□□□□ 0.67
LINC00839-201ENST00000424751 TECPR2O15040 1411 aa19.21■□□□□ 0.67
LINC00839-201ENST00000424751 KCNA6P17658 529 aa19.2■□□□□ 0.66
LINC00839-201ENST00000424751 RALBP1Q15311 655 aa19.2■□□□□ 0.66
LINC00839-201ENST00000424751 PNISRQ8TF01 805 aaKnown RBP19.2■□□□□ 0.66
LINC00839-201ENST00000424751 PRR36Q9H6K5 1346 aa19.2■□□□□ 0.66
LINC00839-201ENST00000424751 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
LINC00839-201ENST00000424751 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
LINC00839-201ENST00000424751 TBX22Q9Y458 520 aa19.18■□□□□ 0.66
LINC00839-201ENST00000424751 WASLO00401 505 aaPredicted RBP19.18■□□□□ 0.66
LINC00839-201ENST00000424751 ANKLE2Q86XL3 938 aa19.18■□□□□ 0.66
LINC00839-201ENST00000424751 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
LINC00839-201ENST00000424751 FBLN1P23142 703 aa19.16■□□□□ 0.66
LINC00839-201ENST00000424751 PPP4R2Q9NY27 417 aa19.16■□□□□ 0.66
LINC00839-201ENST00000424751 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
LINC00839-201ENST00000424751 FAM135BQ49AJ0 1406 aa19.15■□□□□ 0.66
LINC00839-201ENST00000424751 ANKRD36BQ8N2N9 1353 aa19.14■□□□□ 0.65
LINC00839-201ENST00000424751 NLRP13Q86W25 1043 aa19.14■□□□□ 0.65
LINC00839-201ENST00000424751 GGNBP2Q9H3C7 697 aa19.13■□□□□ 0.65
LINC00839-201ENST00000424751 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
LINC00839-201ENST00000424751 NUDT16Q96DE0 195 aaKnown RBP19.13■□□□□ 0.65
LINC00839-201ENST00000424751 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
LINC00839-201ENST00000424751 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
LINC00839-201ENST00000424751 IRX6P78412 446 aaPredicted RBP19.12■□□□□ 0.65
LINC00839-201ENST00000424751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.12■□□□□ 0.65
LINC00839-201ENST00000424751 CHD2O14647 1828 aaKnown RBP19.12■□□□□ 0.65
LINC00839-201ENST00000424751 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
LINC00839-201ENST00000424751 PPIP5K1Q6PFW1 1433 aa19.11■□□□□ 0.65
LINC00839-201ENST00000424751 ATAD2Q6PL18 1390 aa19.1■□□□□ 0.65
LINC00839-201ENST00000424751 USP32Q8NFA0 1604 aa19.1■□□□□ 0.65
LINC00839-201ENST00000424751 ATP7BP35670 1465 aa19.1■□□□□ 0.65
LINC00839-201ENST00000424751 NPHP4O75161 1426 aaPredicted RBP19.1■□□□□ 0.65
LINC00839-201ENST00000424751 SIRT1Q96EB6 747 aa19.08■□□□□ 0.65
LINC00839-201ENST00000424751 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.65
LINC00839-201ENST00000424751 DIP2AQ14689 1571 aa19.08■□□□□ 0.64
LINC00839-201ENST00000424751 NKTRP30414 1462 aaKnown RBP19.08■□□□□ 0.64
LINC00839-201ENST00000424751 FYB1O15117 783 aa19.07■□□□□ 0.64
LINC00839-201ENST00000424751 MORC1Q86VD1 984 aa19.07■□□□□ 0.64
LINC00839-201ENST00000424751 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
LINC00839-201ENST00000424751 NPC1L1Q9UHC9 1359 aa19.06■□□□□ 0.64
LINC00839-201ENST00000424751 NALCNQ8IZF0 1738 aa19.05■□□□□ 0.64
LINC00839-201ENST00000424751 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
LINC00839-201ENST00000424751 ADAMTS8Q9UP79 889 aa19.04■□□□□ 0.64
LINC00839-201ENST00000424751 ADGRB2O60241 1585 aa19.04■□□□□ 0.64
LINC00839-201ENST00000424751 NME9Q86XW9 330 aa19.04■□□□□ 0.64
LINC00839-201ENST00000424751 CGNL1Q0VF96 1302 aa19.04■□□□□ 0.64
LINC00839-201ENST00000424751 STRCP1A6NGW2 1772 aa19.03■□□□□ 0.64
LINC00839-201ENST00000424751 TERF2IPQ9NYB0 399 aa19.03■□□□□ 0.64
LINC00839-201ENST00000424751 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
LINC00839-201ENST00000424751 ZBED9Q6R2W3 1325 aa19.03■□□□□ 0.64
LINC00839-201ENST00000424751 CPSF1Q10570 1443 aaKnown RBP19.02■□□□□ 0.64
LINC00839-201ENST00000424751 TOPAZ1Q8N9V7 1692 aa19.02■□□□□ 0.64
LINC00839-201ENST00000424751 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
LINC00839-201ENST00000424751 KIF20BQ96Q89 1820 aa19.01■□□□□ 0.63
LINC00839-201ENST00000424751 AKAP12Q02952 1782 aa19.01■□□□□ 0.63
LINC00839-201ENST00000424751 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
LINC00839-201ENST00000424751 CCDC146Q8IYE0 955 aa19■□□□□ 0.63
LINC00839-201ENST00000424751 LMTK3Q96Q04 1460 aa19■□□□□ 0.63
LINC00839-201ENST00000424751 ACEP12821 1306 aa19■□□□□ 0.63
LINC00839-201ENST00000424751 MTHFSP49914 203 aa19■□□□□ 0.63
LINC00839-201ENST00000424751 ITSN1Q15811 1721 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms