RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RANGAP1P46060 587 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-205ENST00000424674 AMHR2Q16671 573 aa6.71□□□□□ -1.34
SF3B1-205ENST00000424674 HLA-CQ95604 372 aa6.71□□□□□ -1.34
SF3B1-205ENST00000424674 PRR20EP86478 221 aa6.7□□□□□ -1.34
SF3B1-205ENST00000424674 PRR20CP86479 221 aa6.7□□□□□ -1.34
SF3B1-205ENST00000424674 PRR20DP86480 221 aa6.7□□□□□ -1.34
SF3B1-205ENST00000424674 PRR20BP86481 221 aa6.7□□□□□ -1.34
SF3B1-205ENST00000424674 PRR20AP86496 221 aa6.7□□□□□ -1.34
SF3B1-205ENST00000424674 NUTM1Q86Y26 1132 aa6.7□□□□□ -1.34
SF3B1-205ENST00000424674 LCE2BO14633 110 aa6.69□□□□□ -1.34
SF3B1-205ENST00000424674 SSTR3P32745 418 aaPredicted RBP6.69□□□□□ -1.34
SF3B1-205ENST00000424674 GUCA2AQ02747 115 aa6.69□□□□□ -1.34
SF3B1-205ENST00000424674 TRAF7Q6Q0C0 670 aa6.69□□□□□ -1.34
SF3B1-205ENST00000424674 USB1Q9BQ65 265 aaKnown RBP6.69□□□□□ -1.34
SF3B1-205ENST00000424674 RPIAP49247 311 aa6.68□□□□□ -1.34
SF3B1-205ENST00000424674 MMP16P51512 607 aa6.68□□□□□ -1.34
SF3B1-205ENST00000424674 GIGYF2Q6Y7W6 1299 aaKnown RBP6.68□□□□□ -1.34
SF3B1-205ENST00000424674 TNFRSF10AO00220 468 aa6.67□□□□□ -1.34
SF3B1-205ENST00000424674 GDF9O60383 454 aa6.67□□□□□ -1.34
SF3B1-205ENST00000424674 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
SF3B1-205ENST00000424674 ZBTB24O43167 697 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-205ENST00000424674 FDX1P10109 184 aa6.66□□□□□ -1.34
SF3B1-205ENST00000424674 PARP9Q8IXQ6 854 aa6.66□□□□□ -1.34
SF3B1-205ENST00000424674 AK7Q96M32 723 aa6.66□□□□□ -1.34
SF3B1-205ENST00000424674 GTF3C3Q9Y5Q9 886 aa6.66□□□□□ -1.34
SF3B1-205ENST00000424674 TRIM66O15016 1216 aa6.65□□□□□ -1.34
SF3B1-205ENST00000424674 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
SF3B1-205ENST00000424674 CD2BP2O95400 341 aaKnown RBP6.64□□□□□ -1.35
SF3B1-205ENST00000424674 FOXC1Q12948 553 aa6.64□□□□□ -1.35
SF3B1-205ENST00000424674 PKDCCQ504Y2 493 aa6.64□□□□□ -1.35
SF3B1-205ENST00000424674 RETREG3Q86VR2 466 aa6.64□□□□□ -1.35
SF3B1-205ENST00000424674 PKD2L1Q9P0L9 805 aa6.64□□□□□ -1.35
SF3B1-205ENST00000424674 FAM187AA6NFU0 413 aa6.63□□□□□ -1.35
SF3B1-205ENST00000424674 DGAT1O75907 488 aa6.63□□□□□ -1.35
SF3B1-205ENST00000424674 JUNDP17535 347 aa6.63□□□□□ -1.35
SF3B1-205ENST00000424674 SYMPKQ92797 1274 aaKnown RBP6.63□□□□□ -1.35
SF3B1-205ENST00000424674 BEGAINQ9BUH8 593 aa6.63□□□□□ -1.35
SF3B1-205ENST00000424674 PCDHGC3Q9UN70 934 aa6.63□□□□□ -1.35
SF3B1-205ENST00000424674 MOXD2PA6NHM9 499 aa6.62□□□□□ -1.35
SF3B1-205ENST00000424674 C6orf229H3BNL8 230 aa6.62□□□□□ -1.35
SF3B1-205ENST00000424674 TRIM32Q13049 653 aa6.62□□□□□ -1.35
SF3B1-205ENST00000424674 MS4A1P11836 297 aa6.61□□□□□ -1.35
SF3B1-205ENST00000424674 NDUFV2P19404 249 aa6.61□□□□□ -1.35
SF3B1-205ENST00000424674 CCDC24Q8N4L8 307 aa6.61□□□□□ -1.35
SF3B1-205ENST00000424674 MYT1Q01538 1121 aa6.6□□□□□ -1.35
SF3B1-205ENST00000424674 PDE4DQ08499 809 aa6.6□□□□□ -1.35
SF3B1-205ENST00000424674 DIXDC1Q155Q3 683 aa6.6□□□□□ -1.35
SF3B1-205ENST00000424674 SLC24A3Q9HC58 644 aa6.6□□□□□ -1.35
SF3B1-205ENST00000424674 WNT7AO00755 349 aa6.59□□□□□ -1.35
SF3B1-205ENST00000424674 CYP4X1Q8N118 509 aa6.59□□□□□ -1.35
SF3B1-205ENST00000424674 NUDT12Q9BQG2 462 aa6.59□□□□□ -1.35
SF3B1-205ENST00000424674 TBC1D2Q9BYX2 928 aa6.59□□□□□ -1.35
SF3B1-205ENST00000424674 SPDYE5A6NIY4 337 aa6.58□□□□□ -1.36
SF3B1-205ENST00000424674 GJA5P36382 358 aa6.58□□□□□ -1.36
SF3B1-205ENST00000424674 MTMR2Q13614 643 aa6.58□□□□□ -1.36
SF3B1-205ENST00000424674 TOR4AQ9NXH8 423 aa6.58□□□□□ -1.36
SF3B1-205ENST00000424674 CCNYL3P0C7X3 344 aa6.57□□□□□ -1.36
SF3B1-205ENST00000424674 RSBN1LQ6PCB5 846 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-205ENST00000424674 PRR7Q8TB68 274 aa6.57□□□□□ -1.36
SF3B1-205ENST00000424674 WNT7BP56706 349 aa6.56□□□□□ -1.36
SF3B1-205ENST00000424674 PTPRNQ16849 979 aa6.56□□□□□ -1.36
SF3B1-205ENST00000424674 TTC24A2A3L6 582 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-205ENST00000424674 SPTLC1O15269 473 aa6.55□□□□□ -1.36
SF3B1-205ENST00000424674 ZNF787Q6DD87 383 aa6.55□□□□□ -1.36
SF3B1-205ENST00000424674 MRGPRX2Q96LB1 330 aa6.55□□□□□ -1.36
SF3B1-205ENST00000424674 ST8SIA5O15466 376 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 AVPP01185 164 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 SKOR1P84550 965 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 DESI1Q6ICB0 168 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 RIC3Q7Z5B4 369 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 CRIPAKQ8N1N5 446 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
SF3B1-205ENST00000424674 ZBTB3Q9H5J0 574 aa6.54□□□□□ -1.36
SF3B1-205ENST00000424674 RC3H1Q5TC82 1133 aaKnown RBP6.53□□□□□ -1.36
SF3B1-205ENST00000424674 PTCRAQ6ISU1 281 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-205ENST00000424674 AAASQ9NRG9 546 aa6.53□□□□□ -1.36
SF3B1-205ENST00000424674 PCDHB15Q9Y5E8 787 aa6.53□□□□□ -1.36
SF3B1-205ENST00000424674 HRCP23327 699 aa6.52□□□□□ -1.37
SF3B1-205ENST00000424674 CSPP1Q1MSJ5 1256 aa6.52□□□□□ -1.37
SF3B1-205ENST00000424674 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
SF3B1-205ENST00000424674 CTC1Q2NKJ3 1217 aa6.52□□□□□ -1.37
SF3B1-205ENST00000424674 PRPF38BQ5VTL8 546 aaKnown RBP6.52□□□□□ -1.37
SF3B1-205ENST00000424674 MYSM1Q5VVJ2 828 aa6.52□□□□□ -1.37
SF3B1-205ENST00000424674 CFAP99D6REC4 459 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 AXIN1O15169 862 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 SMPD1P17405 629 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 KCNH2Q12809 1159 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 EHBP1Q8NDI1 1231 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 CABLES1Q8TDN4 633 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 UNC93B1Q9H1C4 597 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 EVA1BQ9NVM1 165 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 LIMD1Q9UGP4 676 aa6.51□□□□□ -1.37
SF3B1-205ENST00000424674 J3QL48 77 aa6.5□□□□□ -1.37
SF3B1-205ENST00000424674 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-205ENST00000424674 TUSC1Q2TAM9 212 aa6.5□□□□□ -1.37
SF3B1-205ENST00000424674 LINC01559Q495D7 138 aa6.5□□□□□ -1.37
SF3B1-205ENST00000424674 C14orf37Q86TY3 774 aa6.5□□□□□ -1.37
SF3B1-205ENST00000424674 CLK2P49760 499 aaKnown RBP6.49□□□□□ -1.37
SF3B1-205ENST00000424674 LYPD8Q6UX82 237 aa6.49□□□□□ -1.37
SF3B1-205ENST00000424674 NUTM2BA6NNL0 878 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms