RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 PRXQ9BXM0 1461 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 PRR20EP86478 221 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 PRR20CP86479 221 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 PRR20DP86480 221 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 PRR20BP86481 221 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 PRR20AP86496 221 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 MYT1Q01538 1121 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 ZNF697Q5TEC3 545 aa10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
SEMA3A-203ENST00000424555 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
SEMA3A-203ENST00000424555 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
SEMA3A-203ENST00000424555 CFTRP13569 1480 aa10.68□□□□□ -0.7
SEMA3A-203ENST00000424555 MORN1Q5T089 497 aa10.67□□□□□ -0.7
SEMA3A-203ENST00000424555 THAP11Q96EK4 314 aa10.67□□□□□ -0.7
SEMA3A-203ENST00000424555 SPSB2Q99619 263 aa10.67□□□□□ -0.7
SEMA3A-203ENST00000424555 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
SEMA3A-203ENST00000424555 POTECB2RU33 542 aa10.65□□□□□ -0.7
SEMA3A-203ENST00000424555 TNFRSF10AO00220 468 aa10.65□□□□□ -0.7
SEMA3A-203ENST00000424555 DGAT1O75907 488 aa10.65□□□□□ -0.7
SEMA3A-203ENST00000424555 FUT2Q10981 343 aa10.65□□□□□ -0.7
SEMA3A-203ENST00000424555 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.7
SEMA3A-203ENST00000424555 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
SEMA3A-203ENST00000424555 FAM160A2Q8N612 972 aaPredicted RBP10.64□□□□□ -0.71
SEMA3A-203ENST00000424555 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
SEMA3A-203ENST00000424555 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
SEMA3A-203ENST00000424555 RDH13Q8NBN7 331 aa10.63□□□□□ -0.71
SEMA3A-203ENST00000424555 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
SEMA3A-203ENST00000424555 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
SEMA3A-203ENST00000424555 CUX1P39880 1505 aa10.63□□□□□ -0.71
SEMA3A-203ENST00000424555 GCGRP47871 477 aa10.62□□□□□ -0.71
SEMA3A-203ENST00000424555 PKDCCQ504Y2 493 aa10.62□□□□□ -0.71
SEMA3A-203ENST00000424555 SLC27A5Q9Y2P5 690 aa10.62□□□□□ -0.71
SEMA3A-203ENST00000424555 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
SEMA3A-203ENST00000424555 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
SEMA3A-203ENST00000424555 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
SEMA3A-203ENST00000424555 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
SEMA3A-203ENST00000424555 FOXC1Q12948 553 aa10.57□□□□□ -0.72
SEMA3A-203ENST00000424555 BRICD5Q6PL45 260 aa10.57□□□□□ -0.72
SEMA3A-203ENST00000424555 PRDM9Q9NQV7 894 aa10.57□□□□□ -0.72
SEMA3A-203ENST00000424555 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
SEMA3A-203ENST00000424555 RPIAP49247 311 aa10.56□□□□□ -0.72
SEMA3A-203ENST00000424555 FCF1Q9Y324 198 aaKnown RBP10.56□□□□□ -0.72
SEMA3A-203ENST00000424555 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
SEMA3A-203ENST00000424555 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
SEMA3A-203ENST00000424555 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
SEMA3A-203ENST00000424555 GPIHBP1Q8IV16 184 aa10.55□□□□□ -0.72
SEMA3A-203ENST00000424555 SALL2Q9Y467 1007 aaPredicted RBP10.55□□□□□ -0.72
SEMA3A-203ENST00000424555 AAASQ9NRG9 546 aa10.54□□□□□ -0.72
SEMA3A-203ENST00000424555 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
SEMA3A-203ENST00000424555 IGF1RP08069 1367 aa10.53□□□□□ -0.72
SEMA3A-203ENST00000424555 CADPSQ9ULU8 1353 aa10.53□□□□□ -0.72
SEMA3A-203ENST00000424555 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
SEMA3A-203ENST00000424555 SULF1Q8IWU6 871 aa10.53□□□□□ -0.72
SEMA3A-203ENST00000424555 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.73
SEMA3A-203ENST00000424555 CLSPNQ9HAW4 1339 aa10.52□□□□□ -0.73
SEMA3A-203ENST00000424555 LMOD2Q6P5Q4 547 aa10.51□□□□□ -0.73
SEMA3A-203ENST00000424555 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
SEMA3A-203ENST00000424555 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
SEMA3A-203ENST00000424555 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
SEMA3A-203ENST00000424555 CD46P15529 392 aa10.49□□□□□ -0.73
SEMA3A-203ENST00000424555 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
SEMA3A-203ENST00000424555 BCANQ96GW7 911 aa10.49□□□□□ -0.73
SEMA3A-203ENST00000424555 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
SEMA3A-203ENST00000424555 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
SEMA3A-203ENST00000424555 ACIN1Q9UKV3 1341 aaKnown RBP10.48□□□□□ -0.73
SEMA3A-203ENST00000424555 CUX2O14529 1486 aa10.47□□□□□ -0.73
SEMA3A-203ENST00000424555 MAP3K1Q13233 1512 aa10.47□□□□□ -0.73
SEMA3A-203ENST00000424555 AVPP01185 164 aa10.46□□□□□ -0.73
SEMA3A-203ENST00000424555 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
SEMA3A-203ENST00000424555 PRDM2Q13029 1718 aa10.45□□□□□ -0.74
SEMA3A-203ENST00000424555 IRF6O14896 467 aa10.45□□□□□ -0.74
SEMA3A-203ENST00000424555 MAP2K5Q13163 448 aa10.45□□□□□ -0.74
SEMA3A-203ENST00000424555 HLA-CQ95604 372 aa10.45□□□□□ -0.74
SEMA3A-203ENST00000424555 MMP16P51512 607 aa10.44□□□□□ -0.74
SEMA3A-203ENST00000424555 DHX57Q6P158 1386 aaKnown RBP10.43□□□□□ -0.74
SEMA3A-203ENST00000424555 LCE2AQ5TA79 106 aaPredicted RBP10.43□□□□□ -0.74
SEMA3A-203ENST00000424555 CYP4X1Q8N118 509 aa10.43□□□□□ -0.74
SEMA3A-203ENST00000424555 CARMIL1Q5VZK9 1371 aa10.42□□□□□ -0.74
SEMA3A-203ENST00000424555 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
SEMA3A-203ENST00000424555 NEUROD1Q13562 356 aa10.42□□□□□ -0.74
SEMA3A-203ENST00000424555 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
SEMA3A-203ENST00000424555 KDM4AO75164 1064 aa10.41□□□□□ -0.74
SEMA3A-203ENST00000424555 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
SEMA3A-203ENST00000424555 DXOO77932 396 aaKnown RBP10.4□□□□□ -0.74
SEMA3A-203ENST00000424555 Q3C1V9 767 aa10.4□□□□□ -0.74
SEMA3A-203ENST00000424555 ZBTB24O43167 697 aaPredicted RBP10.39□□□□□ -0.75
SEMA3A-203ENST00000424555 SMPD1P17405 629 aa10.39□□□□□ -0.75
SEMA3A-203ENST00000424555 TRIM32Q13049 653 aa10.39□□□□□ -0.75
SEMA3A-203ENST00000424555 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
SEMA3A-203ENST00000424555 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
SEMA3A-203ENST00000424555 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
SEMA3A-203ENST00000424555 WNT7AO00755 349 aa10.38□□□□□ -0.75
SEMA3A-203ENST00000424555 SMCPP49901 116 aaPredicted RBP10.38□□□□□ -0.75
SEMA3A-203ENST00000424555 GMPR2Q9P2T1 348 aaKnown RBP10.38□□□□□ -0.75
SEMA3A-203ENST00000424555 AXIN1O15169 862 aa10.37□□□□□ -0.75
SEMA3A-203ENST00000424555 RANGAP1P46060 587 aaPredicted RBP10.37□□□□□ -0.75
SEMA3A-203ENST00000424555 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
SEMA3A-203ENST00000424555 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
SEMA3A-203ENST00000424555 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
SEMA3A-203ENST00000424555 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms