RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 IRX2Q9BZI1 471 aaPredicted RBP10.59□□□□□ -0.71
EPHA4-206ENST00000424339 ANKRD30AQ9BXX3 1397 aa10.59□□□□□ -0.71
EPHA4-206ENST00000424339 KIDINS220Q9ULH0 1771 aa10.58□□□□□ -0.72
EPHA4-206ENST00000424339 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
EPHA4-206ENST00000424339 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
EPHA4-206ENST00000424339 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.72
EPHA4-206ENST00000424339 PPP1R37O75864 691 aa10.57□□□□□ -0.72
EPHA4-206ENST00000424339 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
EPHA4-206ENST00000424339 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
EPHA4-206ENST00000424339 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
EPHA4-206ENST00000424339 NCOA1Q15788 1441 aa10.57□□□□□ -0.72
EPHA4-206ENST00000424339 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
EPHA4-206ENST00000424339 DIP2CQ9Y2E4 1556 aa10.56□□□□□ -0.72
EPHA4-206ENST00000424339 ATP10AO60312 1499 aa10.55□□□□□ -0.72
EPHA4-206ENST00000424339 DUOX2Q9NRD8 1548 aa10.55□□□□□ -0.72
EPHA4-206ENST00000424339 ABCA6Q8N139 1617 aa10.55□□□□□ -0.72
EPHA4-206ENST00000424339 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
EPHA4-206ENST00000424339 ERBINQ96RT1 1412 aa10.54□□□□□ -0.72
EPHA4-206ENST00000424339 VPS9D1Q9Y2B5 631 aa10.54□□□□□ -0.72
EPHA4-206ENST00000424339 A2MP01023 1474 aa10.54□□□□□ -0.72
EPHA4-206ENST00000424339 AGLP35573 1532 aa10.53□□□□□ -0.72
EPHA4-206ENST00000424339 HFM1A2PYH4 1435 aa10.53□□□□□ -0.72
EPHA4-206ENST00000424339 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
EPHA4-206ENST00000424339 YEATS2Q9ULM3 1422 aa10.53□□□□□ -0.72
EPHA4-206ENST00000424339 FOXK1P85037 733 aa10.53□□□□□ -0.72
EPHA4-206ENST00000424339 EIF2AK4Q9P2K8 1649 aaKnown RBP10.53□□□□□ -0.72
EPHA4-206ENST00000424339 BCORL1Q5H9F3 1711 aa10.53□□□□□ -0.72
EPHA4-206ENST00000424339 DHX29Q7Z478 1369 aaKnown RBP10.52□□□□□ -0.72
EPHA4-206ENST00000424339 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
EPHA4-206ENST00000424339 IFFO2Q5TF58 517 aa10.52□□□□□ -0.73
EPHA4-206ENST00000424339 GCC2Q8IWJ2 1684 aa10.51□□□□□ -0.73
EPHA4-206ENST00000424339 ITGAEP38570 1179 aa10.51□□□□□ -0.73
EPHA4-206ENST00000424339 FAM135AQ9P2D6 1515 aa10.51□□□□□ -0.73
EPHA4-206ENST00000424339 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
EPHA4-206ENST00000424339 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
EPHA4-206ENST00000424339 CHIC2Q9UKJ5 165 aa10.5□□□□□ -0.73
EPHA4-206ENST00000424339 NAIPQ13075 1403 aa10.5□□□□□ -0.73
EPHA4-206ENST00000424339 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
EPHA4-206ENST00000424339 RNF17Q9BXT8 1623 aaKnown RBP10.47□□□□□ -0.73
EPHA4-206ENST00000424339 HRCP23327 699 aa10.47□□□□□ -0.73
EPHA4-206ENST00000424339 A0A0G2JS52 829 aa10.46□□□□□ -0.73
EPHA4-206ENST00000424339 DSG2Q14126 1118 aa10.46□□□□□ -0.73
EPHA4-206ENST00000424339 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
EPHA4-206ENST00000424339 SETD5Q9C0A6 1442 aa10.46□□□□□ -0.74
EPHA4-206ENST00000424339 DEPDC5O75140 1603 aa10.46□□□□□ -0.74
EPHA4-206ENST00000424339 PRDM15P57071 1507 aaPredicted RBP10.45□□□□□ -0.74
EPHA4-206ENST00000424339 RGL2O15211 777 aa10.45□□□□□ -0.74
EPHA4-206ENST00000424339 ZNF454Q8N9F8 522 aa10.45□□□□□ -0.74
EPHA4-206ENST00000424339 WNT2BQ93097 391 aa10.45□□□□□ -0.74
EPHA4-206ENST00000424339 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
EPHA4-206ENST00000424339 UNC13BO14795 1591 aa10.44□□□□□ -0.74
EPHA4-206ENST00000424339 KANK1Q14678 1352 aa10.44□□□□□ -0.74
EPHA4-206ENST00000424339 ARID4BQ4LE39 1312 aaPredicted RBP10.44□□□□□ -0.74
EPHA4-206ENST00000424339 KIF3BO15066 747 aa10.44□□□□□ -0.74
EPHA4-206ENST00000424339 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
EPHA4-206ENST00000424339 CNTLNQ9NXG0 1405 aa10.43□□□□□ -0.74
EPHA4-206ENST00000424339 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
EPHA4-206ENST00000424339 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
EPHA4-206ENST00000424339 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
EPHA4-206ENST00000424339 PTPREP23469 700 aa10.41□□□□□ -0.74
EPHA4-206ENST00000424339 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
EPHA4-206ENST00000424339 BCL2L12Q9HB09 334 aa10.41□□□□□ -0.74
EPHA4-206ENST00000424339 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
EPHA4-206ENST00000424339 IQGAP3Q86VI3 1631 aa10.4□□□□□ -0.74
EPHA4-206ENST00000424339 RAB3GAP2Q9H2M9 1393 aa10.4□□□□□ -0.74
EPHA4-206ENST00000424339 VWDEQ8N2E2 1590 aa10.4□□□□□ -0.74
EPHA4-206ENST00000424339 LMTK2Q8IWU2 1503 aa10.4□□□□□ -0.74
EPHA4-206ENST00000424339 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.74
EPHA4-206ENST00000424339 MROH2AA6NES4 1674 aa10.4□□□□□ -0.74
EPHA4-206ENST00000424339 MROH1Q8NDA8 1641 aa10.4□□□□□ -0.75
EPHA4-206ENST00000424339 ADAMTSL3P82987 1691 aa10.39□□□□□ -0.75
EPHA4-206ENST00000424339 GGT6Q6P531 493 aa10.39□□□□□ -0.75
EPHA4-206ENST00000424339 FER1L4A9Z1Z3 1794 aa10.39□□□□□ -0.75
EPHA4-206ENST00000424339 RPRD2Q5VT52 1461 aaKnown RBP10.38□□□□□ -0.75
EPHA4-206ENST00000424339 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
EPHA4-206ENST00000424339 PCGF6Q9BYE7 350 aa10.38□□□□□ -0.75
EPHA4-206ENST00000424339 NUP155O75694 1391 aa10.38□□□□□ -0.75
EPHA4-206ENST00000424339 ABCC3O15438 1527 aa10.38□□□□□ -0.75
EPHA4-206ENST00000424339 TET3O43151 1660 aa10.38□□□□□ -0.75
EPHA4-206ENST00000424339 WASHC2CQ9Y4E1 1318 aa10.37□□□□□ -0.75
EPHA4-206ENST00000424339 ARHGAP31Q2M1Z3 1444 aa10.37□□□□□ -0.75
EPHA4-206ENST00000424339 ZBED2Q9BTP6 218 aa10.36□□□□□ -0.75
EPHA4-206ENST00000424339 EFCAB6Q5THR3 1501 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 PKD2Q13563 968 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 Q6ZNB5 142 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 TRIM52Q96A61 297 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 CAMSAP1Q5T5Y3 1602 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 MADDQ8WXG6 1647 aa10.35□□□□□ -0.75
EPHA4-206ENST00000424339 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
EPHA4-206ENST00000424339 CEP152O94986 1710 aa10.34□□□□□ -0.75
EPHA4-206ENST00000424339 FOSBP53539 338 aa10.34□□□□□ -0.75
EPHA4-206ENST00000424339 MLECQ14165 292 aa10.34□□□□□ -0.75
EPHA4-206ENST00000424339 PZPP20742 1482 aa10.34□□□□□ -0.75
EPHA4-206ENST00000424339 NPATQ14207 1427 aa10.33□□□□□ -0.76
EPHA4-206ENST00000424339 RIMS1Q86UR5 1692 aaKnown RBP10.32□□□□□ -0.76
EPHA4-206ENST00000424339 ZMYM3Q14202 1370 aa10.32□□□□□ -0.76
EPHA4-206ENST00000424339 MPHOSPH9Q99550 1183 aa10.31□□□□□ -0.76
EPHA4-206ENST00000424339 SETD1BQ9UPS6 1966 aaKnown RBP10.31□□□□□ -0.76
EPHA4-206ENST00000424339 PTPRMP28827 1452 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms