RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LPXNO60711 386 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 EIF3AQ14152 1382 aaKnown RBP4.62□□□□□ -1.67
TOP2A-201ENST00000423485 AATKQ6ZMQ8 1374 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 RAB3GAP2Q9H2M9 1393 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 NUDCQ9Y266 331 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 EIF6P56537 245 aaKnown RBP4.61□□□□□ -1.67
TOP2A-201ENST00000423485 SAFB2Q14151 953 aaKnown RBP eCLIP4.61□□□□□ -1.67
TOP2A-201ENST00000423485 KDM2AQ9Y2K7 1162 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 FAM135AQ9P2D6 1515 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 KALRNO60229 2985 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 NCKAP5LQ9HCH0 1330 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 CENPBP07199 599 aaPredicted RBP4.61□□□□□ -1.67
TOP2A-201ENST00000423485 SPRYD3Q8NCJ5 442 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 VTI1AQ96AJ9 217 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 ZNF408Q9H9D4 720 aa4.61□□□□□ -1.67
TOP2A-201ENST00000423485 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
TOP2A-201ENST00000423485 PZPP20742 1482 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 FYCO1Q9BQS8 1478 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 RGL3Q3MIN7 710 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 PRM3Q9NNZ6 103 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 PPP4R2Q9NY27 417 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 FCHSD2O94868 740 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 ZBTB33Q86T24 672 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 ZNF622Q969S3 477 aaKnown RBP eCLIP4.6□□□□□ -1.677e-12■□□□□ 11.2
TOP2A-201ENST00000423485 DDRGK1Q96HY6 314 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 HINFPQ9BQA5 517 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 ABCA8O94911 1581 aa4.6□□□□□ -1.67
TOP2A-201ENST00000423485 DSPP15924 2871 aaKnown RBP4.59□□□□□ -1.67
TOP2A-201ENST00000423485 PRKCSHP14314 528 aaPredicted RBP4.59□□□□□ -1.67
TOP2A-201ENST00000423485 FAM196AQ6ZSG2 479 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 EP400NLQ6ZTU2 488 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.67
TOP2A-201ENST00000423485 PTPN23Q9H3S7 1636 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 TUBGCP6Q96RT7 1819 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 KRT27Q7Z3Y8 459 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 VPS37DQ86XT2 251 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 RBM42Q9BTD8 480 aaKnown RBP4.59□□□□□ -1.67
TOP2A-201ENST00000423485 WWC3Q9ULE0 1092 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 LBHD1Q9BQE6 289 aaPredicted RBP4.59□□□□□ -1.67
TOP2A-201ENST00000423485 BCS1LQ9Y276 419 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 NR2E3Q9Y5X4 410 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 CARMIL1Q5VZK9 1371 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 CEP170Q5SW79 1584 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 UGGT2Q9NYU1 1516 aa4.59□□□□□ -1.67
TOP2A-201ENST00000423485 MYO1BO43795 1136 aa4.59□□□□□ -1.68
TOP2A-201ENST00000423485 NUP153P49790 1475 aaKnown RBP4.59□□□□□ -1.68
TOP2A-201ENST00000423485 GCC2Q8IWJ2 1684 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 HSPA1LP34931 641 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 CEBPAP49715 358 aaPredicted RBP4.58□□□□□ -1.68
TOP2A-201ENST00000423485 ST5P78524 1137 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 STAC3Q96MF2 364 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.58□□□□□ -1.68
TOP2A-201ENST00000423485 RFC4P35249 363 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 NLRP13Q86W25 1043 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 SMC4Q9NTJ3 1288 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 PSDA5PKW4 1024 aaPredicted RBP4.58□□□□□ -1.68
TOP2A-201ENST00000423485 ZBTB24O43167 697 aaPredicted RBP4.58□□□□□ -1.68
TOP2A-201ENST00000423485 RBM5P52756 815 aaKnown RBP eCLIP4.58□□□□□ -1.68
TOP2A-201ENST00000423485 PBRM1Q86U86 1689 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 NPHP3Q7Z494 1330 aa4.58□□□□□ -1.68
TOP2A-201ENST00000423485 ADCY10Q96PN6 1610 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 APLP1P51693 650 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 BMS1Q14692 1282 aaKnown RBP4.57□□□□□ -1.68
TOP2A-201ENST00000423485 ANKRD13DQ6ZTN6 518 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 ZNF652Q9Y2D9 606 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 ACEP12821 1306 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 YEATS2Q9ULM3 1422 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 TATP17735 454 aaPredicted RBP4.57□□□□□ -1.68
TOP2A-201ENST00000423485 SOGA3Q5TF21 947 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 SMARCC1Q92922 1105 aaPredicted RBP4.57□□□□□ -1.68
TOP2A-201ENST00000423485 KIF7Q2M1P5 1343 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 CNTLNQ9NXG0 1405 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 PPM1FP49593 454 aaPredicted RBP4.57□□□□□ -1.68
TOP2A-201ENST00000423485 HDAC5Q9UQL6 1122 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 ROCK1Q13464 1354 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 TERF2IPQ9NYB0 399 aa4.57□□□□□ -1.68
TOP2A-201ENST00000423485 TNNT2P45379 298 aaPredicted RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 GORABQ5T7V8 394 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 MYH16Q9H6N6 1097 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 DDX54Q8TDD1 881 aaKnown RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 MTIF3Q9H2K0 278 aaKnown RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 MAPK8IP3Q9UPT6 1336 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 NCOA2Q15596 1464 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 CROCC2H7BZ55 1655 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 SPHKAPQ2M3C7 1700 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 RPRD2Q5VT52 1461 aaKnown RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 WDR62O43379 1518 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 CDK13Q14004 1512 aaKnown RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 ABCC10Q5T3U5 1492 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 FHAD1B1AJZ9 1412 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 SMG6Q86US8 1419 aaKnown RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 A0A087WZG4 1122 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 RDXP35241 583 aaKnown RBP4.56□□□□□ -1.68
TOP2A-201ENST00000423485 ERICH6BQ5W0A0 696 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 ZNF518AQ6AHZ1 1483 aa4.56□□□□□ -1.68
TOP2A-201ENST00000423485 HOXD10P28358 340 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 CA8P35219 290 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 DDB1Q16531 1140 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 NBPF11Q86T75 865 aa4.55□□□□□ -1.68
TOP2A-201ENST00000423485 AXDND1Q5T1B0 1012 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms