RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 PTPRUQ92729 1446 aa14.02□□□□□ -0.16
HDLBP-209ENST00000422933 NCOA3Q9Y6Q9 1424 aa14.02□□□□□ -0.16
HDLBP-209ENST00000422933 EIF4G2P78344 907 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDLBP-209ENST00000422933 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
HDLBP-209ENST00000422933 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
HDLBP-209ENST00000422933 CENPJQ9HC77 1338 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-209ENST00000422933 MSH6P52701 1360 aa14□□□□□ -0.17
HDLBP-209ENST00000422933 TMEM94Q12767 1356 aa13.99□□□□□ -0.17
HDLBP-209ENST00000422933 ATF3P18847 181 aa13.99□□□□□ -0.17
HDLBP-209ENST00000422933 SAFB2Q14151 953 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDLBP-209ENST00000422933 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
HDLBP-209ENST00000422933 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
HDLBP-209ENST00000422933 ARHGEF28Q8N1W1 1705 aaKnown RBP13.98□□□□□ -0.17
HDLBP-209ENST00000422933 USP47Q96K76 1375 aa13.98□□□□□ -0.17
HDLBP-209ENST00000422933 ROBO2Q9HCK4 1378 aa13.98□□□□□ -0.17
HDLBP-209ENST00000422933 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
HDLBP-209ENST00000422933 CADPS2Q86UW7 1296 aa13.96□□□□□ -0.17
HDLBP-209ENST00000422933 MINK1Q8N4C8 1332 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-209ENST00000422933 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
HDLBP-209ENST00000422933 CDCA8Q53HL2 280 aa13.95□□□□□ -0.18
HDLBP-209ENST00000422933 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
HDLBP-209ENST00000422933 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-209ENST00000422933 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
HDLBP-209ENST00000422933 EVC2Q86UK5 1308 aa13.94□□□□□ -0.18
HDLBP-209ENST00000422933 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
HDLBP-209ENST00000422933 TMF1P82094 1093 aa13.93□□□□□ -0.18
HDLBP-209ENST00000422933 DCCP43146 1447 aa13.92□□□□□ -0.18
HDLBP-209ENST00000422933 HSPA5P11021 654 aaKnown RBP13.92□□□□□ -0.18
HDLBP-209ENST00000422933 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
HDLBP-209ENST00000422933 HIRIP3Q9BW71 556 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-209ENST00000422933 PLEKHH1Q9ULM0 1364 aa13.92□□□□□ -0.18
HDLBP-209ENST00000422933 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-209ENST00000422933 POTEAQ6S8J7 498 aa13.91□□□□□ -0.18
HDLBP-209ENST00000422933 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
HDLBP-209ENST00000422933 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-209ENST00000422933 NALCNQ8IZF0 1738 aa13.9□□□□□ -0.18
HDLBP-209ENST00000422933 CDK19Q9BWU1 502 aa13.89□□□□□ -0.19
HDLBP-209ENST00000422933 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
HDLBP-209ENST00000422933 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
HDLBP-209ENST00000422933 PHLPP1O60346 1717 aa13.87□□□□□ -0.19
HDLBP-209ENST00000422933 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
HDLBP-209ENST00000422933 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
HDLBP-209ENST00000422933 NUTM2FA1L443 756 aa13.86□□□□□ -0.19
HDLBP-209ENST00000422933 POLR3GLQ9BT43 218 aa13.86□□□□□ -0.19
HDLBP-209ENST00000422933 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-209ENST00000422933 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
HDLBP-209ENST00000422933 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
HDLBP-209ENST00000422933 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 ITSN1Q15811 1721 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 NUDT16Q96DE0 195 aaKnown RBP13.84□□□□□ -0.19
HDLBP-209ENST00000422933 TESK2Q96S53 571 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 CABP2Q9NPB3 220 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 CCDC61Q9Y6R9 512 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
HDLBP-209ENST00000422933 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
HDLBP-209ENST00000422933 LRP6O75581 1613 aa13.82□□□□□ -0.2
HDLBP-209ENST00000422933 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
HDLBP-209ENST00000422933 NINLQ9Y2I6 1382 aa13.81□□□□□ -0.2
HDLBP-209ENST00000422933 MST1RQ04912 1400 aa13.81□□□□□ -0.2
HDLBP-209ENST00000422933 C1orf167Q5SNV9 1468 aa13.8□□□□□ -0.2
HDLBP-209ENST00000422933 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-209ENST00000422933 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
HDLBP-209ENST00000422933 PHF8Q9UPP1 1060 aa13.8□□□□□ -0.2
HDLBP-209ENST00000422933 RGPD8O14715 1765 aaPredicted RBP13.79□□□□□ -0.2
HDLBP-209ENST00000422933 PSME1Q06323 249 aa13.79□□□□□ -0.2
HDLBP-209ENST00000422933 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
HDLBP-209ENST00000422933 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-209ENST00000422933 NPHP3Q7Z494 1330 aa13.78□□□□□ -0.2
HDLBP-209ENST00000422933 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
HDLBP-209ENST00000422933 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.21
HDLBP-209ENST00000422933 ORAI2Q96SN7 254 aa13.77□□□□□ -0.21
HDLBP-209ENST00000422933 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
HDLBP-209ENST00000422933 ATP7BP35670 1465 aa13.76□□□□□ -0.21
HDLBP-209ENST00000422933 PLEKHG3A1L390 1219 aa13.76□□□□□ -0.21
HDLBP-209ENST00000422933 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
HDLBP-209ENST00000422933 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
HDLBP-209ENST00000422933 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
HDLBP-209ENST00000422933 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
HDLBP-209ENST00000422933 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
HDLBP-209ENST00000422933 ACEP12821 1306 aa13.74□□□□□ -0.21
HDLBP-209ENST00000422933 FOXO3O43524 673 aa13.74□□□□□ -0.21
HDLBP-209ENST00000422933 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
HDLBP-209ENST00000422933 JCADQ9P266 1359 aa13.73□□□□□ -0.21
HDLBP-209ENST00000422933 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
HDLBP-209ENST00000422933 KIF7Q2M1P5 1343 aa13.73□□□□□ -0.21
HDLBP-209ENST00000422933 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
HDLBP-209ENST00000422933 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
HDLBP-209ENST00000422933 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-209ENST00000422933 CCDC7Q96M83 1385 aa13.72□□□□□ -0.21
HDLBP-209ENST00000422933 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-209ENST00000422933 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
HDLBP-209ENST00000422933 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.21
HDLBP-209ENST00000422933 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.22
HDLBP-209ENST00000422933 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-209ENST00000422933 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
HDLBP-209ENST00000422933 ANKRD36BQ8N2N9 1353 aa13.7□□□□□ -0.22
HDLBP-209ENST00000422933 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
HDLBP-209ENST00000422933 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
HDLBP-209ENST00000422933 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms