RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 SLC3A2P08195 630 aaKnown RBP11.12□□□□□ -0.63
CD109-202ENST00000422508 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
CD109-202ENST00000422508 CUX2O14529 1486 aa11.11□□□□□ -0.63
CD109-202ENST00000422508 CT47B1P0C2W7 299 aaPredicted RBP11.11□□□□□ -0.63
CD109-202ENST00000422508 ZNF396Q96N95 335 aaPredicted RBP11.11□□□□□ -0.63
CD109-202ENST00000422508 CBFA2T2O43439 604 aa11.11□□□□□ -0.63
CD109-202ENST00000422508 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
CD109-202ENST00000422508 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
CD109-202ENST00000422508 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
CD109-202ENST00000422508 ANKRD1Q15327 319 aa11.1□□□□□ -0.63
CD109-202ENST00000422508 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
CD109-202ENST00000422508 C1orf141Q5JVX7 400 aa11.1□□□□□ -0.63
CD109-202ENST00000422508 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
CD109-202ENST00000422508 RAB3GAP2Q9H2M9 1393 aa11.09□□□□□ -0.63
CD109-202ENST00000422508 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
CD109-202ENST00000422508 AK9Q5TCS8 1911 aa11.09□□□□□ -0.63
CD109-202ENST00000422508 APBB1O00213 710 aa11.09□□□□□ -0.63
CD109-202ENST00000422508 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
CD109-202ENST00000422508 STAMBPO95630 424 aa11.09□□□□□ -0.63
CD109-202ENST00000422508 CSB-PGBD3P0DP91 1061 aa11.09□□□□□ -0.63
CD109-202ENST00000422508 API5Q9BZZ5 524 aaKnown RBP11.09□□□□□ -0.63
CD109-202ENST00000422508 NUP155O75694 1391 aa11.08□□□□□ -0.63
CD109-202ENST00000422508 HSPA5P11021 654 aaKnown RBP11.08□□□□□ -0.64
CD109-202ENST00000422508 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
CD109-202ENST00000422508 RALYLQ86SE5 291 aaKnown RBP11.08□□□□□ -0.64
CD109-202ENST00000422508 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
CD109-202ENST00000422508 LUZP1Q86V48 1076 aa11.08□□□□□ -0.64
CD109-202ENST00000422508 VPS37DQ86XT2 251 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 CCDC112Q8NEF3 446 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
CD109-202ENST00000422508 MICALCLQ6ZW33 695 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 DDX12PQ92771 950 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
CD109-202ENST00000422508 RRP1P56182 461 aaKnown RBP11.07□□□□□ -0.64
CD109-202ENST00000422508 AXDND1Q5T1B0 1012 aaPredicted RBP11.07□□□□□ -0.64
CD109-202ENST00000422508 C9orf78Q9NZ63 289 aaPredicted RBP11.07□□□□□ -0.64
CD109-202ENST00000422508 PDE4AP27815 886 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 CFAP57Q96MR6 1250 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 WIZO95785 1651 aa11.07□□□□□ -0.64
CD109-202ENST00000422508 CLASRPQ8N2M8 674 aaKnown RBP11.06□□□□□ -0.64
CD109-202ENST00000422508 PDE4CQ08493 712 aa11.06□□□□□ -0.64
CD109-202ENST00000422508 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
CD109-202ENST00000422508 RILPL2Q969X0 211 aa11.06□□□□□ -0.64
CD109-202ENST00000422508 CCDC192P0DO97 292 aa11.06□□□□□ -0.64
CD109-202ENST00000422508 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
CD109-202ENST00000422508 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
CD109-202ENST00000422508 CCAR1Q8IX12 1150 aaKnown RBP11.06□□□□□ -0.64
CD109-202ENST00000422508 NFXL1Q6ZNB6 911 aa11.05□□□□□ -0.64
CD109-202ENST00000422508 TSPY26PQ9H489 355 aa11.05□□□□□ -0.64
CD109-202ENST00000422508 AMPHP49418 695 aa11.05□□□□□ -0.64
CD109-202ENST00000422508 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
CD109-202ENST00000422508 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
CD109-202ENST00000422508 PLEKHH1Q9ULM0 1364 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 CNTROBQ8N137 903 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 POLA1P09884 1462 aaPredicted RBP11.04□□□□□ -0.64
CD109-202ENST00000422508 SLC4A10Q6U841 1118 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 LRRCC1Q9C099 1032 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 SEPT11Q9NVA2 429 aaKnown RBP11.04□□□□□ -0.64
CD109-202ENST00000422508 HECW1Q76N89 1606 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
CD109-202ENST00000422508 DZIP1LQ8IYY4 767 aaKnown RBP11.04□□□□□ -0.64
CD109-202ENST00000422508 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
CD109-202ENST00000422508 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
CD109-202ENST00000422508 POTEB2H3BUK9 544 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 CDK5RAP3Q96JB5 506 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.03□□□□□ -0.64
CD109-202ENST00000422508 V9GYY5 206 aaPredicted RBP11.03□□□□□ -0.64
CD109-202ENST00000422508 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 CDKL5O76039 1030 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 JAKMIP3Q5VZ66 844 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 G3BP1Q13283 466 aaKnown RBP eCLIP11.03□□□□□ -0.64
CD109-202ENST00000422508 GIMAP7Q8NHV1 300 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 SMC2O95347 1197 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 CETN2P41208 172 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 PKD2Q13563 968 aa11.03□□□□□ -0.64
CD109-202ENST00000422508 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.64
CD109-202ENST00000422508 TUBB4BP68371 445 aa11.02□□□□□ -0.64
CD109-202ENST00000422508 SDF4Q9BRK5 362 aa11.02□□□□□ -0.64
CD109-202ENST00000422508 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.64
CD109-202ENST00000422508 CCDC181Q5TID7 509 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 PPFIBP1Q86W92 1011 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 TRIM5Q9C035 493 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 CALCOCO1Q9P1Z2 691 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
CD109-202ENST00000422508 SHTN1A0MZ66 631 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
CD109-202ENST00000422508 IMMTQ16891 758 aaKnown RBP11.02□□□□□ -0.65
CD109-202ENST00000422508 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 ZNF397Q8NF99 534 aaPredicted RBP11.01□□□□□ -0.65
CD109-202ENST00000422508 MPHOSPH9Q99550 1183 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 HSP90AB3PQ58FF7 597 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 ITSN2Q9NZM3 1697 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 CDC45O75419 566 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 COG3Q96JB2 828 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 USP47Q96K76 1375 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 EFCAB2Q5VUJ9 269 aa11.01□□□□□ -0.65
CD109-202ENST00000422508 FYCO1Q9BQS8 1478 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms