RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ADGRL3Q9HAR2 1447 aa24.75■■□□□ 1.55
LINC00271-201ENST00000421378 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.74■■□□□ 1.55
LINC00271-201ENST00000421378 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
LINC00271-201ENST00000421378 MSH6P52701 1360 aa24.71■■□□□ 1.55
LINC00271-201ENST00000421378 ST20-MTHFSA0A0A6YYL1 179 aa24.71■■□□□ 1.55
LINC00271-201ENST00000421378 ADGRB2O60241 1585 aa24.7■■□□□ 1.54
LINC00271-201ENST00000421378 MINK1Q8N4C8 1332 aaPredicted RBP24.69■■□□□ 1.54
LINC00271-201ENST00000421378 C19orf44Q9H6X5 657 aa24.69■■□□□ 1.54
LINC00271-201ENST00000421378 SBNO2Q9Y2G9 1366 aa24.68■■□□□ 1.54
LINC00271-201ENST00000421378 IQSEC2Q5JU85 1478 aa24.68■■□□□ 1.54
LINC00271-201ENST00000421378 CDC42BPGQ6DT37 1551 aa24.68■■□□□ 1.54
LINC00271-201ENST00000421378 HIRIP3Q9BW71 556 aaPredicted RBP24.67■■□□□ 1.54
LINC00271-201ENST00000421378 DCCP43146 1447 aa24.67■■□□□ 1.54
LINC00271-201ENST00000421378 CERKQ8TCT0 537 aa24.67■■□□□ 1.54
LINC00271-201ENST00000421378 HSPA5P11021 654 aaKnown RBP24.66■■□□□ 1.54
LINC00271-201ENST00000421378 TESK2Q96S53 571 aa24.63■■□□□ 1.53
LINC00271-201ENST00000421378 ATF3P18847 181 aa24.63■■□□□ 1.53
LINC00271-201ENST00000421378 CADPS2Q86UW7 1296 aa24.62■■□□□ 1.53
LINC00271-201ENST00000421378 TULP4Q9NRJ4 1543 aa24.61■■□□□ 1.53
LINC00271-201ENST00000421378 SLC24A1O60721 1099 aa24.6■■□□□ 1.53
LINC00271-201ENST00000421378 WASLO00401 505 aaPredicted RBP24.59■■□□□ 1.53
LINC00271-201ENST00000421378 EVC2Q86UK5 1308 aa24.59■■□□□ 1.53
LINC00271-201ENST00000421378 FMN2Q9NZ56 1722 aa24.59■■□□□ 1.53
LINC00271-201ENST00000421378 CDK19Q9BWU1 502 aa24.56■■□□□ 1.52
LINC00271-201ENST00000421378 MST1RQ04912 1400 aa24.55■■□□□ 1.52
LINC00271-201ENST00000421378 TMF1P82094 1093 aa24.55■■□□□ 1.52
LINC00271-201ENST00000421378 SRPK2P78362 688 aaKnown RBP24.54■■□□□ 1.52
LINC00271-201ENST00000421378 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
LINC00271-201ENST00000421378 NUTM2FA1L443 756 aa24.54■■□□□ 1.52
LINC00271-201ENST00000421378 ANKARQ7Z5J8 1434 aa24.53■■□□□ 1.52
LINC00271-201ENST00000421378 TOM1O60784 492 aa24.52■■□□□ 1.52
LINC00271-201ENST00000421378 ATP7BP35670 1465 aa24.52■■□□□ 1.52
LINC00271-201ENST00000421378 USP32Q8NFA0 1604 aa24.52■■□□□ 1.52
LINC00271-201ENST00000421378 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
LINC00271-201ENST00000421378 CABP2Q9NPB3 220 aa24.51■■□□□ 1.51
LINC00271-201ENST00000421378 UBAP1LF5GYI3 381 aa24.5■■□□□ 1.51
LINC00271-201ENST00000421378 SLAIN2Q9P270 581 aa24.5■■□□□ 1.51
LINC00271-201ENST00000421378 PRR36Q9H6K5 1346 aa24.48■■□□□ 1.51
LINC00271-201ENST00000421378 RGPD8O14715 1765 aaPredicted RBP24.48■■□□□ 1.51
LINC00271-201ENST00000421378 CDCA8Q53HL2 280 aa24.48■■□□□ 1.51
LINC00271-201ENST00000421378 ITSN1Q15811 1721 aa24.48■■□□□ 1.51
LINC00271-201ENST00000421378 NUDT16Q96DE0 195 aaKnown RBP24.47■■□□□ 1.51
LINC00271-201ENST00000421378 ATAD2Q6PL18 1390 aa24.47■■□□□ 1.51
LINC00271-201ENST00000421378 TOPAZ1Q8N9V7 1692 aa24.46■■□□□ 1.51
LINC00271-201ENST00000421378 PUS7Q96PZ0 661 aaKnown RBP24.46■■□□□ 1.51
LINC00271-201ENST00000421378 CCDC61Q9Y6R9 512 aa24.45■■□□□ 1.5
LINC00271-201ENST00000421378 ESCO1Q5FWF5 840 aa24.44■■□□□ 1.5
LINC00271-201ENST00000421378 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
LINC00271-201ENST00000421378 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
LINC00271-201ENST00000421378 PPIP5K1Q6PFW1 1433 aa24.42■■□□□ 1.5
LINC00271-201ENST00000421378 C11orf95C9JLR9 678 aaPredicted RBP24.42■■□□□ 1.5
LINC00271-201ENST00000421378 PIP4K2BP78356 416 aa24.42■■□□□ 1.5
LINC00271-201ENST00000421378 KIF1AQ12756 1690 aa24.41■■□□□ 1.5
LINC00271-201ENST00000421378 BRINP3Q76B58 766 aa24.41■■□□□ 1.5
LINC00271-201ENST00000421378 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
LINC00271-201ENST00000421378 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.5
LINC00271-201ENST00000421378 KIF7Q2M1P5 1343 aa24.39■■□□□ 1.49
LINC00271-201ENST00000421378 PHF8Q9UPP1 1060 aa24.38■■□□□ 1.49
LINC00271-201ENST00000421378 NINLQ9Y2I6 1382 aa24.38■■□□□ 1.49
LINC00271-201ENST00000421378 CABP1Q9NZU7 370 aa24.37■■□□□ 1.49
LINC00271-201ENST00000421378 PMFBP1Q8TBY8 1022 aa24.37■■□□□ 1.49
LINC00271-201ENST00000421378 TMC1Q8TDI8 760 aa24.37■■□□□ 1.49
LINC00271-201ENST00000421378 MYOM1P52179 1685 aa24.36■■□□□ 1.49
LINC00271-201ENST00000421378 CCDC7Q96M83 1385 aa24.35■■□□□ 1.49
LINC00271-201ENST00000421378 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
LINC00271-201ENST00000421378 PLEKHG3A1L390 1219 aa24.35■■□□□ 1.49
LINC00271-201ENST00000421378 POLR3AO14802 1390 aaPredicted RBP24.33■■□□□ 1.49
LINC00271-201ENST00000421378 NHSL1Q5SYE7 1610 aa24.33■■□□□ 1.48
LINC00271-201ENST00000421378 FOXO3O43524 673 aa24.33■■□□□ 1.48
LINC00271-201ENST00000421378 NGDNQ8NEJ9 315 aaKnown RBP24.33■■□□□ 1.48
LINC00271-201ENST00000421378 SLC12A5Q9H2X9 1139 aa24.33■■□□□ 1.48
LINC00271-201ENST00000421378 ACEP12821 1306 aa24.32■■□□□ 1.48
LINC00271-201ENST00000421378 NPHP3Q7Z494 1330 aa24.32■■□□□ 1.48
LINC00271-201ENST00000421378 AHDC1Q5TGY3 1603 aaPredicted RBP24.3■■□□□ 1.48
LINC00271-201ENST00000421378 CD163L1Q9NR16 1453 aa24.29■■□□□ 1.48
LINC00271-201ENST00000421378 DDX17Q92841 729 aaKnown RBP24.29■■□□□ 1.48
LINC00271-201ENST00000421378 AKAP12Q02952 1782 aa24.28■■□□□ 1.48
LINC00271-201ENST00000421378 CPSF1Q10570 1443 aaKnown RBP24.28■■□□□ 1.48
LINC00271-201ENST00000421378 TERF2IPQ9NYB0 399 aa24.28■■□□□ 1.48
LINC00271-201ENST00000421378 PSME1Q06323 249 aa24.27■■□□□ 1.48
LINC00271-201ENST00000421378 FBXO41Q8TF61 875 aa24.27■■□□□ 1.48
LINC00271-201ENST00000421378 A0A1W2PP64 1363 aa24.27■■□□□ 1.48
LINC00271-201ENST00000421378 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
LINC00271-201ENST00000421378 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
LINC00271-201ENST00000421378 HDGFL2Q7Z4V5 671 aaPredicted RBP24.26■■□□□ 1.47
LINC00271-201ENST00000421378 PXDNQ92626 1479 aa24.26■■□□□ 1.47
LINC00271-201ENST00000421378 XPCQ01831 940 aaPredicted RBP24.25■■□□□ 1.47
LINC00271-201ENST00000421378 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
LINC00271-201ENST00000421378 USP6P35125 1406 aa24.25■■□□□ 1.47
LINC00271-201ENST00000421378 ZNF692Q9BU19 519 aaPredicted RBP24.25■■□□□ 1.47
LINC00271-201ENST00000421378 MON2Q7Z3U7 1717 aa24.24■■□□□ 1.47
LINC00271-201ENST00000421378 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
LINC00271-201ENST00000421378 SOS2Q07890 1332 aaPredicted RBP24.23■■□□□ 1.47
LINC00271-201ENST00000421378 KRT28Q7Z3Y7 464 aa24.23■■□□□ 1.47
LINC00271-201ENST00000421378 COL16A1Q07092 1604 aaPredicted RBP24.22■■□□□ 1.47
LINC00271-201ENST00000421378 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
LINC00271-201ENST00000421378 TRPM3Q9HCF6 1732 aaPredicted RBP24.2■■□□□ 1.47
LINC00271-201ENST00000421378 BRD4O60885 1362 aaPredicted RBP24.19■■□□□ 1.46
LINC00271-201ENST00000421378 EDC4Q6P2E9 1401 aaKnown RBP24.19■■□□□ 1.46
LINC00271-201ENST00000421378 PANK3Q9H999 370 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms