RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TMEM132EQ6IEE7 984 aa28.04■■■□□ 2.08
VARS2-202ENST00000421263 RAB3GAP2Q9H2M9 1393 aa28.03■■■□□ 2.08
VARS2-202ENST00000421263 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
VARS2-202ENST00000421263 STK26Q9P289 416 aa28.03■■■□□ 2.08
VARS2-202ENST00000421263 CDC42BPGQ6DT37 1551 aa28.02■■■□□ 2.08
VARS2-202ENST00000421263 C14orf93Q9H972 538 aaKnown RBP28.01■■■□□ 2.07
VARS2-202ENST00000421263 AFF2P51816 1311 aa28■■■□□ 2.07
VARS2-202ENST00000421263 SIRT1Q96EB6 747 aa28■■■□□ 2.07
VARS2-202ENST00000421263 NRXN1Q9ULB1 1477 aa27.99■■■□□ 2.07
VARS2-202ENST00000421263 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
VARS2-202ENST00000421263 RXRBP28702 533 aa27.98■■■□□ 2.07
VARS2-202ENST00000421263 YTHDC2Q9H6S0 1430 aaKnown RBP27.98■■■□□ 2.07
VARS2-202ENST00000421263 ESCO1Q5FWF5 840 aa27.97■■■□□ 2.07
VARS2-202ENST00000421263 PLEKHH1Q9ULM0 1364 aa27.97■■■□□ 2.07
VARS2-202ENST00000421263 MYOM2P54296 1465 aa27.95■■■□□ 2.06
VARS2-202ENST00000421263 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
VARS2-202ENST00000421263 NPHP3Q7Z494 1330 aa27.93■■■□□ 2.06
VARS2-202ENST00000421263 HRCP23327 699 aa27.93■■■□□ 2.06
VARS2-202ENST00000421263 CFAP70Q5T0N1 1121 aa27.93■■■□□ 2.06
VARS2-202ENST00000421263 CDK12Q9NYV4 1490 aaPredicted RBP27.92■■■□□ 2.06
VARS2-202ENST00000421263 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
VARS2-202ENST00000421263 FOXO3O43524 673 aa27.9■■■□□ 2.06
VARS2-202ENST00000421263 QTRT2Q9H974 415 aaKnown RBP27.9■■■□□ 2.06
VARS2-202ENST00000421263 PXDNQ92626 1479 aa27.89■■■□□ 2.06
VARS2-202ENST00000421263 ADAMTS2O95450 1211 aa27.89■■■□□ 2.06
VARS2-202ENST00000421263 COL22A1Q8NFW1 1626 aaPredicted RBP27.89■■■□□ 2.05
VARS2-202ENST00000421263 NGLY1Q96IV0 654 aa27.88■■■□□ 2.05
VARS2-202ENST00000421263 NUTM2FA1L443 756 aa27.87■■■□□ 2.05
VARS2-202ENST00000421263 UPF1Q92900 1129 aaKnown RBP eCLIP27.86■■■□□ 2.05
VARS2-202ENST00000421263 FMN2Q9NZ56 1722 aa27.86■■■□□ 2.05
VARS2-202ENST00000421263 RBM6P78332 1123 aaKnown RBP27.85■■■□□ 2.05
VARS2-202ENST00000421263 FNBP4Q8N3X1 1017 aaPredicted RBP27.84■■■□□ 2.05
VARS2-202ENST00000421263 XPCQ01831 940 aaPredicted RBP27.82■■■□□ 2.04
VARS2-202ENST00000421263 STAC3Q96MF2 364 aa27.8■■■□□ 2.04
VARS2-202ENST00000421263 PRAM1Q96QH2 718 aa27.8■■■□□ 2.04
VARS2-202ENST00000421263 DLC1Q96QB1 1528 aa27.79■■■□□ 2.04
VARS2-202ENST00000421263 USP21Q9UK80 565 aa27.79■■■□□ 2.04
VARS2-202ENST00000421263 ADGRB1O14514 1584 aa27.77■■■□□ 2.04
VARS2-202ENST00000421263 KIF1AQ12756 1690 aa27.77■■■□□ 2.04
VARS2-202ENST00000421263 RGS12O14924 1447 aa27.76■■■□□ 2.04
VARS2-202ENST00000421263 SPATA31A3Q5VYP0 1347 aa27.76■■■□□ 2.03
VARS2-202ENST00000421263 DCAF11Q8TEB1 546 aa27.76■■■□□ 2.03
VARS2-202ENST00000421263 KRT28Q7Z3Y7 464 aa27.75■■■□□ 2.03
VARS2-202ENST00000421263 TRPC5Q9UL62 973 aaPredicted RBP27.75■■■□□ 2.03
VARS2-202ENST00000421263 PHF8Q9UPP1 1060 aa27.75■■■□□ 2.03
VARS2-202ENST00000421263 RGPD8O14715 1765 aaPredicted RBP27.74■■■□□ 2.03
VARS2-202ENST00000421263 KDM2AQ9Y2K7 1162 aa27.74■■■□□ 2.03
VARS2-202ENST00000421263 SAFB2Q14151 953 aaKnown RBP eCLIP27.73■■■□□ 2.03
VARS2-202ENST00000421263 POGKQ9P215 609 aa27.73■■■□□ 2.03
VARS2-202ENST00000421263 BCL9LQ86UU0 1499 aa27.71■■■□□ 2.03
VARS2-202ENST00000421263 ATRNO75882 1429 aa27.71■■■□□ 2.03
VARS2-202ENST00000421263 MARF1Q9Y4F3 1742 aaKnown RBP27.71■■■□□ 2.03
VARS2-202ENST00000421263 TRAK1Q9UPV9 953 aa27.7■■■□□ 2.02
VARS2-202ENST00000421263 PSME1Q06323 249 aa27.69■■■□□ 2.02
VARS2-202ENST00000421263 ADGRB2O60241 1585 aa27.68■■■□□ 2.02
VARS2-202ENST00000421263 ANKARQ7Z5J8 1434 aa27.67■■■□□ 2.02
VARS2-202ENST00000421263 USP32Q8NFA0 1604 aa27.66■■■□□ 2.02
VARS2-202ENST00000421263 SBNO1A3KN83 1393 aa27.65■■■□□ 2.02
VARS2-202ENST00000421263 TNS3Q68CZ2 1445 aa27.64■■■□□ 2.02
VARS2-202ENST00000421263 SLIT2O94813 1529 aa27.62■■■□□ 2.01
VARS2-202ENST00000421263 PMFBP1Q8TBY8 1022 aa27.61■■■□□ 2.01
VARS2-202ENST00000421263 HIRIP3Q9BW71 556 aaPredicted RBP27.61■■■□□ 2.01
VARS2-202ENST00000421263 MINK1Q8N4C8 1332 aaPredicted RBP27.61■■■□□ 2.01
VARS2-202ENST00000421263 WASLO00401 505 aaPredicted RBP27.6■■■□□ 2.01
VARS2-202ENST00000421263 GJD4Q96KN9 370 aaPredicted RBP27.6■■■□□ 2.01
VARS2-202ENST00000421263 UNC5CLQ8IV45 518 aa27.59■■■□□ 2.01
VARS2-202ENST00000421263 PRR36Q9H6K5 1346 aa27.59■■■□□ 2.01
VARS2-202ENST00000421263 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.58■■■□□ 2.01
VARS2-202ENST00000421263 CABLES1Q8TDN4 633 aa27.57■■■□□ 2
VARS2-202ENST00000421263 ARHGEF10O15013 1369 aa27.57■■■□□ 2
VARS2-202ENST00000421263 EIF3AQ14152 1382 aaKnown RBP27.57■■■□□ 2
VARS2-202ENST00000421263 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
VARS2-202ENST00000421263 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
VARS2-202ENST00000421263 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
VARS2-202ENST00000421263 ARHGEF28Q8N1W1 1705 aaKnown RBP27.52■■■□□ 2
VARS2-202ENST00000421263 TRPM3Q9HCF6 1732 aaPredicted RBP27.52■■■□□ 2
VARS2-202ENST00000421263 HAP1P54257 671 aaPredicted RBP27.51■■□□□ 1.99
VARS2-202ENST00000421263 RALGAPBQ86X10 1494 aa27.5■■□□□ 1.99
VARS2-202ENST00000421263 GPRASP1Q5JY77 1395 aa27.49■■□□□ 1.99
VARS2-202ENST00000421263 GLI3P10071 1580 aa27.49■■□□□ 1.99
VARS2-202ENST00000421263 ABCA3Q99758 1704 aa27.49■■□□□ 1.99
VARS2-202ENST00000421263 KIAA1210Q9ULL0 1709 aa27.49■■□□□ 1.99
VARS2-202ENST00000421263 FAM83GA6ND36 823 aa27.47■■□□□ 1.99
VARS2-202ENST00000421263 VPS72Q15906 364 aa27.47■■□□□ 1.99
VARS2-202ENST00000421263 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
VARS2-202ENST00000421263 NUDT16Q96DE0 195 aaKnown RBP27.46■■□□□ 1.99
VARS2-202ENST00000421263 NWD2Q9ULI1 1742 aa27.45■■□□□ 1.99
VARS2-202ENST00000421263 PLEKHG5O94827 1062 aa27.45■■□□□ 1.98
VARS2-202ENST00000421263 NBPF1Q3BBV0 1214 aa27.45■■□□□ 1.98
VARS2-202ENST00000421263 NGDNQ8NEJ9 315 aaKnown RBP27.45■■□□□ 1.98
VARS2-202ENST00000421263 ONECUT3O60422 494 aaPredicted RBP27.44■■□□□ 1.98
VARS2-202ENST00000421263 CCDC125Q86Z20 511 aa27.44■■□□□ 1.98
VARS2-202ENST00000421263 EP400Q96L91 3159 aa27.44■■□□□ 1.98
VARS2-202ENST00000421263 ATP7BP35670 1465 aa27.44■■□□□ 1.98
VARS2-202ENST00000421263 CDK19Q9BWU1 502 aa27.43■■□□□ 1.98
VARS2-202ENST00000421263 PLCH1Q4KWH8 1693 aa27.43■■□□□ 1.98
VARS2-202ENST00000421263 ITSN1Q15811 1721 aa27.38■■□□□ 1.97
VARS2-202ENST00000421263 CCDC61Q9Y6R9 512 aa27.38■■□□□ 1.97
VARS2-202ENST00000421263 SEPT12Q8IYM1 358 aa27.37■■□□□ 1.97
VARS2-202ENST00000421263 POLR3AO14802 1390 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms