RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
TRIM49D1-201ENST00000420869 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
TRIM49D1-201ENST00000420869 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
TRIM49D1-201ENST00000420869 KIF13AQ9H1H9 1805 aa11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 PTPRMP28827 1452 aa11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 AKAP12Q02952 1782 aa11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 PLIN1O60240 522 aa11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
TRIM49D1-201ENST00000420869 ANP32AP39687 249 aaKnown RBP11.48□□□□□ -0.57
TRIM49D1-201ENST00000420869 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
TRIM49D1-201ENST00000420869 NSD2O96028 1365 aa11.48□□□□□ -0.57
TRIM49D1-201ENST00000420869 ITSN1Q15811 1721 aa11.47□□□□□ -0.57
TRIM49D1-201ENST00000420869 MON2Q7Z3U7 1717 aa11.47□□□□□ -0.57
TRIM49D1-201ENST00000420869 BACH2Q9BYV9 841 aa11.47□□□□□ -0.57
TRIM49D1-201ENST00000420869 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
TRIM49D1-201ENST00000420869 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 C20orf194Q5TEA3 1177 aa11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 NINLQ9Y2I6 1382 aa11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 COL3A1P02461 1466 aaPredicted RBP11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 AGLP35573 1532 aa11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 ALKQ9UM73 1620 aa11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
TRIM49D1-201ENST00000420869 ANKRD36BQ8N2N9 1353 aa11.46□□□□□ -0.58
TRIM49D1-201ENST00000420869 YEATS2Q9ULM3 1422 aa11.46□□□□□ -0.58
TRIM49D1-201ENST00000420869 MED14O60244 1454 aa11.46□□□□□ -0.58
TRIM49D1-201ENST00000420869 SPATA31D1Q6ZQQ2 1576 aa11.45□□□□□ -0.58
TRIM49D1-201ENST00000420869 PDE4AP27815 886 aa11.45□□□□□ -0.58
TRIM49D1-201ENST00000420869 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
TRIM49D1-201ENST00000420869 E9PSI1 815 aa11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 APAF1O14727 1248 aa11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 CCDC146Q8IYE0 955 aa11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 NLRP1Q9C000 1473 aa11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 GGT6Q6P531 493 aa11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 CENPQQ7L2Z9 268 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 TRAK1Q9UPV9 953 aa11.43□□□□□ -0.58
TRIM49D1-201ENST00000420869 CD163L1Q9NR16 1453 aa11.42□□□□□ -0.58
TRIM49D1-201ENST00000420869 ABCC11Q96J66 1382 aa11.42□□□□□ -0.58
TRIM49D1-201ENST00000420869 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
TRIM49D1-201ENST00000420869 CHGAP10645 457 aaKnown RBP11.41□□□□□ -0.58
TRIM49D1-201ENST00000420869 EVC2Q86UK5 1308 aa11.4□□□□□ -0.58
TRIM49D1-201ENST00000420869 ARHGEF40Q8TER5 1519 aa11.4□□□□□ -0.58
TRIM49D1-201ENST00000420869 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
TRIM49D1-201ENST00000420869 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.59
TRIM49D1-201ENST00000420869 SLC12A5Q9H2X9 1139 aa11.4□□□□□ -0.59
TRIM49D1-201ENST00000420869 C3P01024 1663 aa11.39□□□□□ -0.59
TRIM49D1-201ENST00000420869 CGNL1Q0VF96 1302 aa11.39□□□□□ -0.59
TRIM49D1-201ENST00000420869 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
TRIM49D1-201ENST00000420869 TMEM132EQ6IEE7 984 aa11.39□□□□□ -0.59
TRIM49D1-201ENST00000420869 YTHDC2Q9H6S0 1430 aaKnown RBP11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 RUNDC1Q96C34 613 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 SLC52A1Q9NWF4 448 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 TOPAZ1Q8N9V7 1692 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 A0A1W2PP64 1363 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 UBR1Q8IWV7 1749 aa11.38□□□□□ -0.59
TRIM49D1-201ENST00000420869 CCDC27Q2M243 656 aa11.37□□□□□ -0.59
TRIM49D1-201ENST00000420869 FMN2Q9NZ56 1722 aa11.37□□□□□ -0.59
TRIM49D1-201ENST00000420869 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 NRKQ7Z2Y5 1582 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 LRRC7Q96NW7 1537 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 NALCNQ8IZF0 1738 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 IDI1Q13907 227 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 SKAP1Q86WV1 359 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
TRIM49D1-201ENST00000420869 ATP7BP35670 1465 aa11.35□□□□□ -0.59
TRIM49D1-201ENST00000420869 BCAR3O75815 825 aa11.35□□□□□ -0.59
TRIM49D1-201ENST00000420869 WDR63Q8IWG1 891 aa11.35□□□□□ -0.59
TRIM49D1-201ENST00000420869 RIMS1Q86UR5 1692 aaKnown RBP11.35□□□□□ -0.59
TRIM49D1-201ENST00000420869 A2ML1A8K2U0 1454 aa11.34□□□□□ -0.59
TRIM49D1-201ENST00000420869 CPS1P31327 1500 aa11.34□□□□□ -0.59
TRIM49D1-201ENST00000420869 C8orf34Q49A92 452 aa11.33□□□□□ -0.6
TRIM49D1-201ENST00000420869 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
TRIM49D1-201ENST00000420869 MTHFSP49914 203 aa11.33□□□□□ -0.6
TRIM49D1-201ENST00000420869 TCP11L2Q8N4U5 519 aa11.33□□□□□ -0.6
TRIM49D1-201ENST00000420869 CFAP53Q96M91 514 aa11.33□□□□□ -0.6
TRIM49D1-201ENST00000420869 AAMPQ13685 434 aa11.32□□□□□ -0.6
TRIM49D1-201ENST00000420869 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
TRIM49D1-201ENST00000420869 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
TRIM49D1-201ENST00000420869 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
TRIM49D1-201ENST00000420869 RARSP54136 660 aaKnown RBP11.3□□□□□ -0.6
TRIM49D1-201ENST00000420869 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
TRIM49D1-201ENST00000420869 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
TRIM49D1-201ENST00000420869 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
TRIM49D1-201ENST00000420869 RGPD1P0DJD0 1748 aa11.29□□□□□ -0.6
TRIM49D1-201ENST00000420869 RGPD8O14715 1765 aaPredicted RBP11.29□□□□□ -0.6
TRIM49D1-201ENST00000420869 DEKP35659 375 aaKnown RBP11.29□□□□□ -0.6
TRIM49D1-201ENST00000420869 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
TRIM49D1-201ENST00000420869 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
TRIM49D1-201ENST00000420869 TNNT2P45379 298 aaPredicted RBP11.28□□□□□ -0.6
TRIM49D1-201ENST00000420869 NBR1Q14596 966 aa11.28□□□□□ -0.6
TRIM49D1-201ENST00000420869 PLEKHF1Q96S99 279 aa11.28□□□□□ -0.6
TRIM49D1-201ENST00000420869 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
TRIM49D1-201ENST00000420869 IGHDP01880 384 aa11.27□□□□□ -0.6
TRIM49D1-201ENST00000420869 BCL11AQ9H165 835 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms