RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ZBTB7CA1YPR0 619 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 NCKAP5LQ9HCH0 1330 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 NINLQ9Y2I6 1382 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 PREX1Q8TCU6 1659 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 SIRT1Q96EB6 747 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 PNNQ9H307 717 aaKnown RBP9.83□□□□□ -0.84
BDNF-209ENST00000420794 HSPA2P54652 639 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 PSME1Q06323 249 aa9.82□□□□□ -0.84
BDNF-209ENST00000420794 SOX12O15370 315 aa9.82□□□□□ -0.84
BDNF-209ENST00000420794 NEURL4Q96JN8 1562 aa9.82□□□□□ -0.84
BDNF-209ENST00000420794 U2SURPO15042 1029 aaKnown RBP9.82□□□□□ -0.84
BDNF-209ENST00000420794 SYNMO15061 1565 aa9.82□□□□□ -0.84
BDNF-209ENST00000420794 SBNO2Q9Y2G9 1366 aa9.81□□□□□ -0.84
BDNF-209ENST00000420794 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
BDNF-209ENST00000420794 EIF5BO60841 1220 aaKnown RBP9.81□□□□□ -0.84
BDNF-209ENST00000420794 KCNA6P17658 529 aa9.8□□□□□ -0.84
BDNF-209ENST00000420794 MAPK8IP3Q9UPT6 1336 aa9.8□□□□□ -0.84
BDNF-209ENST00000420794 PMFBP1Q8TBY8 1022 aa9.8□□□□□ -0.84
BDNF-209ENST00000420794 GGNBP2Q9H3C7 697 aa9.8□□□□□ -0.84
BDNF-209ENST00000420794 MADDQ8WXG6 1647 aa9.8□□□□□ -0.84
BDNF-209ENST00000420794 METP08581 1390 aa9.79□□□□□ -0.84
BDNF-209ENST00000420794 TRPM1Q7Z4N2 1603 aa9.79□□□□□ -0.84
BDNF-209ENST00000420794 BRD4O60885 1362 aaPredicted RBP9.79□□□□□ -0.84
BDNF-209ENST00000420794 PIK3C2BO00750 1634 aa9.79□□□□□ -0.84
BDNF-209ENST00000420794 NSD3Q9BZ95 1437 aa9.78□□□□□ -0.84
BDNF-209ENST00000420794 FER1L4A9Z1Z3 1794 aa9.78□□□□□ -0.84
BDNF-209ENST00000420794 PTPRMP28827 1452 aa9.78□□□□□ -0.84
BDNF-209ENST00000420794 U2AF1L5P0DN76 240 aaPredicted RBP9.78□□□□□ -0.84
BDNF-209ENST00000420794 U2AF1Q01081 240 aaKnown RBP eCLIP9.78□□□□□ -0.84
BDNF-209ENST00000420794 NEXMIFQ5QGS0 1516 aa9.78□□□□□ -0.84
BDNF-209ENST00000420794 NPHP4O75161 1426 aaPredicted RBP9.78□□□□□ -0.84
BDNF-209ENST00000420794 DAXXQ9UER7 740 aaPredicted RBP9.78□□□□□ -0.84
BDNF-209ENST00000420794 PIK3R4Q99570 1358 aa9.78□□□□□ -0.84
BDNF-209ENST00000420794 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.85
BDNF-209ENST00000420794 AMPHP49418 695 aa9.77□□□□□ -0.85
BDNF-209ENST00000420794 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
BDNF-209ENST00000420794 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
BDNF-209ENST00000420794 RBM33Q96EV2 1170 aaKnown RBP9.76□□□□□ -0.85
BDNF-209ENST00000420794 NLRP6P59044 892 aa9.76□□□□□ -0.85
BDNF-209ENST00000420794 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
BDNF-209ENST00000420794 SETBP1Q9Y6X0 1596 aa9.76□□□□□ -0.85
BDNF-209ENST00000420794 SETD1BQ9UPS6 1966 aaKnown RBP9.75□□□□□ -0.85
BDNF-209ENST00000420794 TMEM131LA2VDJ0 1609 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 ALKQ9UM73 1620 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 PHF8Q9UPP1 1060 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 NRXN1Q9ULB1 1477 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 ABTB2Q8N961 1025 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 C19orf44Q9H6X5 657 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 LAMC1P11047 1609 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 NSD2O96028 1365 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 FAM135BQ49AJ0 1406 aa9.75□□□□□ -0.85
BDNF-209ENST00000420794 MTHFSP49914 203 aa9.74□□□□□ -0.85
BDNF-209ENST00000420794 MSH6P52701 1360 aa9.74□□□□□ -0.85
BDNF-209ENST00000420794 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
BDNF-209ENST00000420794 MROH2AA6NES4 1674 aa9.74□□□□□ -0.85
BDNF-209ENST00000420794 ACEP12821 1306 aa9.73□□□□□ -0.85
BDNF-209ENST00000420794 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
BDNF-209ENST00000420794 PLEKHH1Q9ULM0 1364 aa9.73□□□□□ -0.85
BDNF-209ENST00000420794 SENP3-EIF4A1A0A087X0R7 540 aa9.73□□□□□ -0.85
BDNF-209ENST00000420794 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
BDNF-209ENST00000420794 CEP170BQ9Y4F5 1589 aaPredicted RBP9.73□□□□□ -0.85
BDNF-209ENST00000420794 KIAA1210Q9ULL0 1709 aa9.72□□□□□ -0.85
BDNF-209ENST00000420794 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
BDNF-209ENST00000420794 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
BDNF-209ENST00000420794 ROBO2Q9HCK4 1378 aa9.72□□□□□ -0.85
BDNF-209ENST00000420794 ASXL1Q8IXJ9 1541 aa9.71□□□□□ -0.85
BDNF-209ENST00000420794 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
BDNF-209ENST00000420794 PPLO60437 1756 aa9.71□□□□□ -0.86
BDNF-209ENST00000420794 SIGLEC1Q9BZZ2 1709 aa9.71□□□□□ -0.86
BDNF-209ENST00000420794 FOXO3O43524 673 aa9.71□□□□□ -0.86
BDNF-209ENST00000420794 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 GTF3C3Q9Y5Q9 886 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 NGEFQ8N5V2 710 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
BDNF-209ENST00000420794 NPC1L1Q9UHC9 1359 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 NME9Q86XW9 330 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 A0A1W2PP64 1363 aa9.7□□□□□ -0.86
BDNF-209ENST00000420794 KDM5AP29375 1690 aaKnown RBP9.7□□□□□ -0.86
BDNF-209ENST00000420794 TTC21AQ8NDW8 1320 aa9.69□□□□□ -0.86
BDNF-209ENST00000420794 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.69□□□□□ -0.86
BDNF-209ENST00000420794 ADAMTS13Q76LX8 1427 aa9.69□□□□□ -0.86
BDNF-209ENST00000420794 C3P01024 1663 aa9.69□□□□□ -0.86
BDNF-209ENST00000420794 FYB1O15117 783 aa9.69□□□□□ -0.86
BDNF-209ENST00000420794 CCDC146Q8IYE0 955 aa9.69□□□□□ -0.86
BDNF-209ENST00000420794 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
BDNF-209ENST00000420794 PARD3Q8TEW0 1356 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 KDM4FA0A1W2PPD8 638 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 PLEKHG3A1L390 1219 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 LTV1Q96GA3 475 aaPredicted RBP9.68□□□□□ -0.86
BDNF-209ENST00000420794 TTC21BQ7Z4L5 1316 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 SLIT1O75093 1534 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 CALD1Q05682 793 aaKnown RBP9.68□□□□□ -0.86
BDNF-209ENST00000420794 CCDC184Q52MB2 194 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 KCNH5Q8NCM2 988 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
BDNF-209ENST00000420794 ADGRB1O14514 1584 aa9.67□□□□□ -0.86
BDNF-209ENST00000420794 ARHGAP23Q9P227 1491 aa9.67□□□□□ -0.86
BDNF-209ENST00000420794 DLC1Q96QB1 1528 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms