RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
RFX3-205ENST00000420720 CEP350Q5VT06 3117 aa11.03□□□□□ -0.64
RFX3-205ENST00000420720 PHF12Q96QT6 1004 aa11.02□□□□□ -0.65
RFX3-205ENST00000420720 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
RFX3-205ENST00000420720 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
RFX3-205ENST00000420720 LMTK2Q8IWU2 1503 aa11.01□□□□□ -0.65
RFX3-205ENST00000420720 LHX8Q68G74 356 aa11.01□□□□□ -0.65
RFX3-205ENST00000420720 BCANQ96GW7 911 aa11.01□□□□□ -0.65
RFX3-205ENST00000420720 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
RFX3-205ENST00000420720 PIK3C2BO00750 1634 aa11□□□□□ -0.65
RFX3-205ENST00000420720 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
RFX3-205ENST00000420720 ATRNO75882 1429 aa11□□□□□ -0.65
RFX3-205ENST00000420720 NOS1P29475 1434 aa11□□□□□ -0.65
RFX3-205ENST00000420720 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
RFX3-205ENST00000420720 BRINP3Q76B58 766 aa10.99□□□□□ -0.65
RFX3-205ENST00000420720 CFAP65Q6ZU64 1925 aaKnown RBP10.99□□□□□ -0.65
RFX3-205ENST00000420720 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
RFX3-205ENST00000420720 CLCN6P51797 869 aa10.98□□□□□ -0.65
RFX3-205ENST00000420720 PNPLA6Q8IY17 1366 aa10.98□□□□□ -0.65
RFX3-205ENST00000420720 ANKRD50Q9ULJ7 1429 aa10.98□□□□□ -0.65
RFX3-205ENST00000420720 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
RFX3-205ENST00000420720 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
RFX3-205ENST00000420720 ASXL1Q8IXJ9 1541 aa10.96□□□□□ -0.65
RFX3-205ENST00000420720 USP21Q9UK80 565 aa10.96□□□□□ -0.65
RFX3-205ENST00000420720 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
RFX3-205ENST00000420720 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
RFX3-205ENST00000420720 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
RFX3-205ENST00000420720 ADAMTS2O95450 1211 aa10.95□□□□□ -0.66
RFX3-205ENST00000420720 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
RFX3-205ENST00000420720 ITGAEP38570 1179 aa10.94□□□□□ -0.66
RFX3-205ENST00000420720 HDGFP51858 240 aaKnown RBP10.94□□□□□ -0.66
RFX3-205ENST00000420720 NCOA3Q9Y6Q9 1424 aa10.93□□□□□ -0.66
RFX3-205ENST00000420720 RIMS2Q9UQ26 1411 aa10.92□□□□□ -0.66
RFX3-205ENST00000420720 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
RFX3-205ENST00000420720 PPARGC1BQ86YN6 1023 aaKnown RBP10.92□□□□□ -0.66
RFX3-205ENST00000420720 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
RFX3-205ENST00000420720 DCBLD2Q96PD2 775 aa10.92□□□□□ -0.66
RFX3-205ENST00000420720 RPRD2Q5VT52 1461 aaKnown RBP10.92□□□□□ -0.66
RFX3-205ENST00000420720 PLEKHG1Q9ULL1 1385 aa10.91□□□□□ -0.66
RFX3-205ENST00000420720 UNC13BO14795 1591 aa10.91□□□□□ -0.66
RFX3-205ENST00000420720 ZNF784Q8NCA9 323 aaPredicted RBP10.91□□□□□ -0.66
RFX3-205ENST00000420720 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.91□□□□□ -0.66
RFX3-205ENST00000420720 DDX17Q92841 729 aaKnown RBP10.91□□□□□ -0.66
RFX3-205ENST00000420720 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
RFX3-205ENST00000420720 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
RFX3-205ENST00000420720 ZFYVE9O95405 1425 aa10.91□□□□□ -0.66
RFX3-205ENST00000420720 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
RFX3-205ENST00000420720 C1QTNF8P60827 252 aa10.9□□□□□ -0.66
RFX3-205ENST00000420720 BRWD3Q6RI45 1802 aa10.9□□□□□ -0.66
RFX3-205ENST00000420720 UTRNP46939 3433 aa10.9□□□□□ -0.67
RFX3-205ENST00000420720 C19orf44Q9H6X5 657 aa10.89□□□□□ -0.67
RFX3-205ENST00000420720 NUP155O75694 1391 aa10.89□□□□□ -0.67
RFX3-205ENST00000420720 ROCK1Q13464 1354 aa10.89□□□□□ -0.67
RFX3-205ENST00000420720 GLI3P10071 1580 aa10.88□□□□□ -0.67
RFX3-205ENST00000420720 ATF3P18847 181 aa10.88□□□□□ -0.67
RFX3-205ENST00000420720 R3HDM1Q15032 1099 aaKnown RBP10.88□□□□□ -0.67
RFX3-205ENST00000420720 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
RFX3-205ENST00000420720 MST1RQ04912 1400 aa10.87□□□□□ -0.67
RFX3-205ENST00000420720 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
RFX3-205ENST00000420720 SPHKAPQ2M3C7 1700 aa10.87□□□□□ -0.67
RFX3-205ENST00000420720 CAMTA1Q9Y6Y1 1673 aa10.86□□□□□ -0.67
RFX3-205ENST00000420720 ADAMTS13Q76LX8 1427 aa10.86□□□□□ -0.67
RFX3-205ENST00000420720 SF3B2Q13435 895 aaKnown RBP10.86□□□□□ -0.67
RFX3-205ENST00000420720 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
RFX3-205ENST00000420720 TMEM131LA2VDJ0 1609 aa10.86□□□□□ -0.67
RFX3-205ENST00000420720 PTCH1Q13635 1447 aa10.85□□□□□ -0.67
RFX3-205ENST00000420720 AMOTL2Q9Y2J4 779 aa10.85□□□□□ -0.67
RFX3-205ENST00000420720 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
RFX3-205ENST00000420720 CCDC61Q9Y6R9 512 aa10.84□□□□□ -0.67
RFX3-205ENST00000420720 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
RFX3-205ENST00000420720 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
RFX3-205ENST00000420720 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
RFX3-205ENST00000420720 DCCP43146 1447 aa10.83□□□□□ -0.68
RFX3-205ENST00000420720 PIK3R4Q99570 1358 aa10.82□□□□□ -0.68
RFX3-205ENST00000420720 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
RFX3-205ENST00000420720 PTPRUQ92729 1446 aa10.82□□□□□ -0.68
RFX3-205ENST00000420720 E9PCH4 1651 aa10.82□□□□□ -0.68
RFX3-205ENST00000420720 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
RFX3-205ENST00000420720 LAMC1P11047 1609 aa10.8□□□□□ -0.68
RFX3-205ENST00000420720 IQGAP3Q86VI3 1631 aa10.8□□□□□ -0.68
RFX3-205ENST00000420720 COL22A1Q8NFW1 1626 aaPredicted RBP10.8□□□□□ -0.68
RFX3-205ENST00000420720 BAG6P46379 1132 aa10.8□□□□□ -0.68
RFX3-205ENST00000420720 RASEFQ8IZ41 740 aa10.8□□□□□ -0.68
RFX3-205ENST00000420720 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.8□□□□□ -0.68
RFX3-205ENST00000420720 MYOM2P54296 1465 aa10.8□□□□□ -0.68
RFX3-205ENST00000420720 MYO5BQ9ULV0 1848 aa10.79□□□□□ -0.68
RFX3-205ENST00000420720 MARF1Q9Y4F3 1742 aaKnown RBP10.79□□□□□ -0.68
RFX3-205ENST00000420720 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
RFX3-205ENST00000420720 FKBP8Q14318 412 aa10.79□□□□□ -0.68
RFX3-205ENST00000420720 TRPM2O94759 1503 aa10.78□□□□□ -0.68
RFX3-205ENST00000420720 METP08581 1390 aa10.77□□□□□ -0.68
RFX3-205ENST00000420720 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
RFX3-205ENST00000420720 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
RFX3-205ENST00000420720 SOS2Q07890 1332 aaPredicted RBP10.76□□□□□ -0.69
RFX3-205ENST00000420720 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
RFX3-205ENST00000420720 MIER1Q8N108 512 aa10.75□□□□□ -0.69
RFX3-205ENST00000420720 SLIT2O94813 1529 aa10.74□□□□□ -0.69
RFX3-205ENST00000420720 ATMINO43313 823 aaPredicted RBP10.74□□□□□ -0.69
RFX3-205ENST00000420720 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
RFX3-205ENST00000420720 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms