RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 FSD2A1L4K1 749 aa7.87□□□□□ -1.15
CHD2-202ENST00000420239 ADCY10Q96PN6 1610 aa7.87□□□□□ -1.15
CHD2-202ENST00000420239 DPYSL4O14531 572 aa7.87□□□□□ -1.15
CHD2-202ENST00000420239 TRIM66O15016 1216 aa7.86□□□□□ -1.15
CHD2-202ENST00000420239 PER1O15534 1290 aaPredicted RBP7.86□□□□□ -1.15
CHD2-202ENST00000420239 EMILIN3Q9NT22 766 aa7.86□□□□□ -1.15
CHD2-202ENST00000420239 CLASP1Q7Z460 1538 aa7.86□□□□□ -1.15
CHD2-202ENST00000420239 NLRP1Q9C000 1473 aa7.86□□□□□ -1.15
CHD2-202ENST00000420239 TRPM1Q7Z4N2 1603 aa7.86□□□□□ -1.15
CHD2-202ENST00000420239 TARBP1Q13395 1621 aaKnown RBP7.85□□□□□ -1.15
CHD2-202ENST00000420239 KIAA0586Q9BVV6 1533 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 PBRM1Q86U86 1689 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 PDE4DQ08499 809 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 PIP4P2Q8N4L2 257 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 ANTXR1Q9H6X2 564 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 GPHNQ9NQX3 736 aaPredicted RBP7.85□□□□□ -1.15
CHD2-202ENST00000420239 ERBB4Q15303 1308 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 CAMSAP2Q08AD1 1489 aa7.85□□□□□ -1.15
CHD2-202ENST00000420239 RGS3P49796 1198 aa7.84□□□□□ -1.15
CHD2-202ENST00000420239 PTPRGP23470 1445 aa7.84□□□□□ -1.15
CHD2-202ENST00000420239 GOLGA6L3A6NEY3 463 aa7.84□□□□□ -1.15
CHD2-202ENST00000420239 CD44P16070 742 aaKnown RBP7.84□□□□□ -1.15
CHD2-202ENST00000420239 MKRN3Q13064 507 aaKnown RBP7.84□□□□□ -1.15
CHD2-202ENST00000420239 SP7Q8TDD2 431 aaPredicted RBP7.84□□□□□ -1.15
CHD2-202ENST00000420239 CARD11Q9BXL7 1154 aa7.84□□□□□ -1.15
CHD2-202ENST00000420239 SLKQ9H2G2 1235 aaPredicted RBP7.84□□□□□ -1.15
CHD2-202ENST00000420239 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.15
CHD2-202ENST00000420239 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
CHD2-202ENST00000420239 SHANK2Q9UPX8 1470 aa7.84□□□□□ -1.15
CHD2-202ENST00000420239 ADAMTS12P58397 1594 aa7.84□□□□□ -1.16
CHD2-202ENST00000420239 GPR37O15354 613 aa7.83□□□□□ -1.16
CHD2-202ENST00000420239 PDIA6Q15084 440 aa7.83□□□□□ -1.16
CHD2-202ENST00000420239 COL17A1Q9UMD9 1497 aaPredicted RBP7.83□□□□□ -1.16
CHD2-202ENST00000420239 RAPGEF6Q8TEU7 1601 aa7.83□□□□□ -1.16
CHD2-202ENST00000420239 ST20-MTHFSA0A0A6YYL1 179 aa7.83□□□□□ -1.16
CHD2-202ENST00000420239 SEC24BO95487 1268 aa7.83□□□□□ -1.16
CHD2-202ENST00000420239 PRDM4Q9UKN5 801 aa7.83□□□□□ -1.16
CHD2-202ENST00000420239 NUP153P49790 1475 aaKnown RBP7.83□□□□□ -1.16
CHD2-202ENST00000420239 CENPJQ9HC77 1338 aaPredicted RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 ZNF326Q5BKZ1 582 aaKnown RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 MS4A3Q96HJ5 214 aa7.82□□□□□ -1.16
CHD2-202ENST00000420239 EIF4G3O43432 1585 aaKnown RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 TROQ12816 1431 aaPredicted RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 GPATCH8Q9UKJ3 1502 aaKnown RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 KIAA0556O60303 1618 aa7.82□□□□□ -1.16
CHD2-202ENST00000420239 EIF3AQ14152 1382 aaKnown RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 DSG2Q14126 1118 aa7.82□□□□□ -1.16
CHD2-202ENST00000420239 ILDR1Q86SU0 546 aaPredicted RBP7.82□□□□□ -1.16
CHD2-202ENST00000420239 PRDM15P57071 1507 aaPredicted RBP7.81□□□□□ -1.16
CHD2-202ENST00000420239 ZNF521Q96K83 1311 aa7.81□□□□□ -1.16
CHD2-202ENST00000420239 ZNF644Q9H582 1327 aaPredicted RBP7.81□□□□□ -1.16
CHD2-202ENST00000420239 ANKRD30AQ9BXX3 1397 aa7.81□□□□□ -1.16
CHD2-202ENST00000420239 CALD1Q05682 793 aaKnown RBP7.81□□□□□ -1.16
CHD2-202ENST00000420239 ANKRD50Q9ULJ7 1429 aa7.81□□□□□ -1.16
CHD2-202ENST00000420239 CHRDL2Q6WN34 429 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 ZMYM3Q14202 1370 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 DISP1Q96F81 1524 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 ESPNB1AK53 854 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 TPM2P07951 284 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 RBM10P98175 930 aaKnown RBP7.8□□□□□ -1.16
CHD2-202ENST00000420239 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
CHD2-202ENST00000420239 PRAG1Q86YV5 1406 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 CDC42BPAQ5VT25 1732 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 ABCC10Q5T3U5 1492 aa7.8□□□□□ -1.16
CHD2-202ENST00000420239 CCDC144AA2RUR9 1427 aa7.79□□□□□ -1.16
CHD2-202ENST00000420239 BECN1Q14457 450 aa7.79□□□□□ -1.16
CHD2-202ENST00000420239 DUSP27Q5VZP5 1158 aa7.79□□□□□ -1.16
CHD2-202ENST00000420239 TRMT2AQ8IZ69 625 aaKnown RBP7.79□□□□□ -1.16
CHD2-202ENST00000420239 FAM117AQ9C073 453 aa7.79□□□□□ -1.16
CHD2-202ENST00000420239 MCM4P33991 863 aa7.79□□□□□ -1.16
CHD2-202ENST00000420239 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.79□□□□□ -1.16
CHD2-202ENST00000420239 PDCL3Q9H2J4 239 aa7.79□□□□□ -1.16
CHD2-202ENST00000420239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.79□□□□□ -1.162e-8■■■■□ 20.2
CHD2-202ENST00000420239 PLEKHH1Q9ULM0 1364 aa7.78□□□□□ -1.16
CHD2-202ENST00000420239 SPDYE16A6NNV3 312 aaPredicted RBP7.78□□□□□ -1.16
CHD2-202ENST00000420239 A0A0U1RQG5 324 aaPredicted RBP7.78□□□□□ -1.16
CHD2-202ENST00000420239 MRE11P49959 708 aa7.78□□□□□ -1.16
CHD2-202ENST00000420239 AAMPQ13685 434 aa7.78□□□□□ -1.16
CHD2-202ENST00000420239 TBC1D2Q9BYX2 928 aa7.78□□□□□ -1.16
CHD2-202ENST00000420239 EIF2AK4Q9P2K8 1649 aaKnown RBP7.77□□□□□ -1.16
CHD2-202ENST00000420239 IGHDP01880 384 aa7.77□□□□□ -1.17
CHD2-202ENST00000420239 GRPEL1Q9HAV7 217 aa7.77□□□□□ -1.17
CHD2-202ENST00000420239 NUP160Q12769 1436 aa7.77□□□□□ -1.17
CHD2-202ENST00000420239 ABCC2Q92887 1545 aa7.77□□□□□ -1.17
CHD2-202ENST00000420239 ARHGEF5Q12774 1597 aa7.77□□□□□ -1.17
CHD2-202ENST00000420239 TTLL13PA6NNM8 815 aa7.76□□□□□ -1.17
CHD2-202ENST00000420239 DPY19L2Q6NUT2 758 aa7.76□□□□□ -1.17
CHD2-202ENST00000420239 NUP155O75694 1391 aa7.76□□□□□ -1.17
CHD2-202ENST00000420239 RNF17Q9BXT8 1623 aaKnown RBP7.76□□□□□ -1.17
CHD2-202ENST00000420239 SLFN5Q08AF3 891 aa7.76□□□□□ -1.17
CHD2-202ENST00000420239 TESK2Q96S53 571 aa7.76□□□□□ -1.17
CHD2-202ENST00000420239 PLXNC1O60486 1568 aa7.76□□□□□ -1.17
CHD2-202ENST00000420239 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 TRAK2O60296 914 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 RIPK4P57078 832 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 TBC1D32Q96NH3 1257 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 CFDP1Q9UEE9 299 aaPredicted RBP7.75□□□□□ -1.17
CHD2-202ENST00000420239 NINLQ9Y2I6 1382 aa7.75□□□□□ -1.17
CHD2-202ENST00000420239 PRG4Q92954 1404 aaPredicted RBP7.75□□□□□ -1.17
CHD2-202ENST00000420239 ERBINQ96RT1 1412 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms