RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
COL12A1-204ENST00000419671 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
COL12A1-204ENST00000419671 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-204ENST00000419671 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
COL12A1-204ENST00000419671 TNRQ92752 1358 aa11.02□□□□□ -0.65
COL12A1-204ENST00000419671 YTHDC2Q9H6S0 1430 aaKnown RBP11.02□□□□□ -0.65
COL12A1-204ENST00000419671 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
COL12A1-204ENST00000419671 ZBED9Q6R2W3 1325 aa11.01□□□□□ -0.65
COL12A1-204ENST00000419671 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
COL12A1-204ENST00000419671 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
COL12A1-204ENST00000419671 USP32Q8NFA0 1604 aa11□□□□□ -0.65
COL12A1-204ENST00000419671 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
COL12A1-204ENST00000419671 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
COL12A1-204ENST00000419671 STK26Q9P289 416 aa10.99□□□□□ -0.65
COL12A1-204ENST00000419671 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
COL12A1-204ENST00000419671 DLC1Q96QB1 1528 aa10.98□□□□□ -0.65
COL12A1-204ENST00000419671 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
COL12A1-204ENST00000419671 EVC2Q86UK5 1308 aa10.97□□□□□ -0.65
COL12A1-204ENST00000419671 SAFB2Q14151 953 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL12A1-204ENST00000419671 PUS7Q96PZ0 661 aaKnown RBP10.97□□□□□ -0.65
COL12A1-204ENST00000419671 SLC12A5Q9H2X9 1139 aa10.97□□□□□ -0.65
COL12A1-204ENST00000419671 CEBPAP49715 358 aaPredicted RBP10.96□□□□□ -0.65
COL12A1-204ENST00000419671 PRAM1Q96QH2 718 aa10.96□□□□□ -0.65
COL12A1-204ENST00000419671 TMEM2Q9UHN6 1383 aa10.96□□□□□ -0.66
COL12A1-204ENST00000419671 PPP2R1AP30153 589 aa10.96□□□□□ -0.66
COL12A1-204ENST00000419671 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL12A1-204ENST00000419671 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
COL12A1-204ENST00000419671 METP08581 1390 aa10.94□□□□□ -0.66
COL12A1-204ENST00000419671 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
COL12A1-204ENST00000419671 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-204ENST00000419671 RIMS1Q86UR5 1692 aaKnown RBP10.94□□□□□ -0.66
COL12A1-204ENST00000419671 ANKRD26Q9UPS8 1709 aa10.94□□□□□ -0.66
COL12A1-204ENST00000419671 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
COL12A1-204ENST00000419671 CABP2Q9NPB3 220 aa10.94□□□□□ -0.66
COL12A1-204ENST00000419671 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-204ENST00000419671 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
COL12A1-204ENST00000419671 CPS1P31327 1500 aa10.93□□□□□ -0.66
COL12A1-204ENST00000419671 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-204ENST00000419671 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
COL12A1-204ENST00000419671 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-204ENST00000419671 INSRP06213 1382 aa10.93□□□□□ -0.66
COL12A1-204ENST00000419671 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
COL12A1-204ENST00000419671 SLIT1O75093 1534 aa10.93□□□□□ -0.66
COL12A1-204ENST00000419671 POGKQ9P215 609 aa10.92□□□□□ -0.66
COL12A1-204ENST00000419671 PLEKHH1Q9ULM0 1364 aa10.92□□□□□ -0.66
COL12A1-204ENST00000419671 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
COL12A1-204ENST00000419671 ADAMTS13Q76LX8 1427 aa10.92□□□□□ -0.66
COL12A1-204ENST00000419671 SHPRHQ149N8 1683 aa10.92□□□□□ -0.66
COL12A1-204ENST00000419671 NINLQ9Y2I6 1382 aa10.91□□□□□ -0.66
COL12A1-204ENST00000419671 ARHGAP23Q9P227 1491 aa10.91□□□□□ -0.66
COL12A1-204ENST00000419671 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
COL12A1-204ENST00000419671 ADAMTSL3P82987 1691 aa10.91□□□□□ -0.66
COL12A1-204ENST00000419671 TECPR2O15040 1411 aa10.91□□□□□ -0.66
COL12A1-204ENST00000419671 SMG6Q86US8 1419 aaKnown RBP10.91□□□□□ -0.66
COL12A1-204ENST00000419671 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
COL12A1-204ENST00000419671 WAPLQ7Z5K2 1190 aa10.91□□□□□ -0.66
COL12A1-204ENST00000419671 LTKP29376 864 aa10.9□□□□□ -0.66
COL12A1-204ENST00000419671 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
COL12A1-204ENST00000419671 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
COL12A1-204ENST00000419671 ATAD2Q6PL18 1390 aa10.9□□□□□ -0.66
COL12A1-204ENST00000419671 PLEKHG1Q9ULL1 1385 aa10.9□□□□□ -0.67
COL12A1-204ENST00000419671 MED14O60244 1454 aa10.9□□□□□ -0.67
COL12A1-204ENST00000419671 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-204ENST00000419671 CEP170BQ9Y4F5 1589 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-204ENST00000419671 CDK19Q9BWU1 502 aa10.88□□□□□ -0.67
COL12A1-204ENST00000419671 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
COL12A1-204ENST00000419671 FAM135BQ49AJ0 1406 aa10.88□□□□□ -0.67
COL12A1-204ENST00000419671 ZNF142P52746 1687 aaPredicted RBP10.88□□□□□ -0.67
COL12A1-204ENST00000419671 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
COL12A1-204ENST00000419671 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
COL12A1-204ENST00000419671 AKAP12Q02952 1782 aa10.87□□□□□ -0.67
COL12A1-204ENST00000419671 NEFLP07196 543 aa10.87□□□□□ -0.67
COL12A1-204ENST00000419671 TXNDC2Q86VQ3 553 aa10.87□□□□□ -0.67
COL12A1-204ENST00000419671 NUDCQ9Y266 331 aa10.87□□□□□ -0.67
COL12A1-204ENST00000419671 NSD2O96028 1365 aa10.86□□□□□ -0.67
COL12A1-204ENST00000419671 ITSN1Q15811 1721 aa10.86□□□□□ -0.67
COL12A1-204ENST00000419671 MON2Q7Z3U7 1717 aa10.86□□□□□ -0.67
COL12A1-204ENST00000419671 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
COL12A1-204ENST00000419671 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
COL12A1-204ENST00000419671 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
COL12A1-204ENST00000419671 POLR3AO14802 1390 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-204ENST00000419671 ROBO2Q9HCK4 1378 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 DIP2AQ14689 1571 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
COL12A1-204ENST00000419671 PTPRUQ92729 1446 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 ATP7BP35670 1465 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 PLEKHG5O94827 1062 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 WDR43Q15061 677 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL12A1-204ENST00000419671 MORC1Q86VD1 984 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 BCANQ96GW7 911 aa10.85□□□□□ -0.67
COL12A1-204ENST00000419671 ZNF219Q9P2Y4 722 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-204ENST00000419671 SALL2Q9Y467 1007 aaPredicted RBP10.85□□□□□ -0.67
COL12A1-204ENST00000419671 TOPAZ1Q8N9V7 1692 aa10.84□□□□□ -0.67
COL12A1-204ENST00000419671 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
COL12A1-204ENST00000419671 TERF2IPQ9NYB0 399 aa10.84□□□□□ -0.67
COL12A1-204ENST00000419671 CABP1Q9NZU7 370 aa10.84□□□□□ -0.67
COL12A1-204ENST00000419671 EID1Q9Y6B2 187 aa10.84□□□□□ -0.67
COL12A1-204ENST00000419671 RGPD8O14715 1765 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-204ENST00000419671 MAP2P11137 1827 aaKnown RBP10.83□□□□□ -0.68
COL12A1-204ENST00000419671 SPDYE4A6NLX3 237 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms