RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CPS1P31327 1500 aa17.72■□□□□ 0.43
LINC00642-201ENST00000419459 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
LINC00642-201ENST00000419459 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
LINC00642-201ENST00000419459 MINK1Q8N4C8 1332 aaPredicted RBP17.71■□□□□ 0.43
LINC00642-201ENST00000419459 TECPR2O15040 1411 aa17.71■□□□□ 0.43
LINC00642-201ENST00000419459 DLC1Q96QB1 1528 aa17.7■□□□□ 0.42
LINC00642-201ENST00000419459 KIF7Q2M1P5 1343 aa17.69■□□□□ 0.42
LINC00642-201ENST00000419459 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
LINC00642-201ENST00000419459 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
LINC00642-201ENST00000419459 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
LINC00642-201ENST00000419459 PTCH1Q13635 1447 aa17.66■□□□□ 0.42
LINC00642-201ENST00000419459 TULP4Q9NRJ4 1543 aa17.66■□□□□ 0.42
LINC00642-201ENST00000419459 FAM135BQ49AJ0 1406 aa17.66■□□□□ 0.42
LINC00642-201ENST00000419459 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
LINC00642-201ENST00000419459 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
LINC00642-201ENST00000419459 TMF1P82094 1093 aa17.65■□□□□ 0.42
LINC00642-201ENST00000419459 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
LINC00642-201ENST00000419459 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.42
LINC00642-201ENST00000419459 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
LINC00642-201ENST00000419459 NALCNQ8IZF0 1738 aa17.63■□□□□ 0.41
LINC00642-201ENST00000419459 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
LINC00642-201ENST00000419459 NUTM2FA1L443 756 aa17.61■□□□□ 0.41
LINC00642-201ENST00000419459 NEFLP07196 543 aa17.6■□□□□ 0.41
LINC00642-201ENST00000419459 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
LINC00642-201ENST00000419459 SIRT1Q96EB6 747 aa17.59■□□□□ 0.41
LINC00642-201ENST00000419459 MYOM1P52179 1685 aa17.59■□□□□ 0.41
LINC00642-201ENST00000419459 EVC2Q86UK5 1308 aa17.59■□□□□ 0.41
LINC00642-201ENST00000419459 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
LINC00642-201ENST00000419459 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
LINC00642-201ENST00000419459 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
LINC00642-201ENST00000419459 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
LINC00642-201ENST00000419459 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
LINC00642-201ENST00000419459 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
LINC00642-201ENST00000419459 FKBP8Q14318 412 aa17.57■□□□□ 0.4
LINC00642-201ENST00000419459 XIRP1Q702N8 1843 aaKnown RBP17.57■□□□□ 0.4
LINC00642-201ENST00000419459 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
LINC00642-201ENST00000419459 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
LINC00642-201ENST00000419459 RGPD8O14715 1765 aaPredicted RBP17.56■□□□□ 0.4
LINC00642-201ENST00000419459 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
LINC00642-201ENST00000419459 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
LINC00642-201ENST00000419459 ADGRL3Q9HAR2 1447 aa17.53■□□□□ 0.4
LINC00642-201ENST00000419459 CDCA8Q53HL2 280 aa17.53■□□□□ 0.4
LINC00642-201ENST00000419459 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
LINC00642-201ENST00000419459 RBM19Q9Y4C8 960 aaKnown RBP17.53■□□□□ 0.4
LINC00642-201ENST00000419459 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
LINC00642-201ENST00000419459 SLC24A1O60721 1099 aa17.52■□□□□ 0.39
LINC00642-201ENST00000419459 PRR36Q9H6K5 1346 aa17.52■□□□□ 0.39
LINC00642-201ENST00000419459 USP32Q8NFA0 1604 aa17.51■□□□□ 0.39
LINC00642-201ENST00000419459 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
LINC00642-201ENST00000419459 ATP7BP35670 1465 aa17.51■□□□□ 0.39
LINC00642-201ENST00000419459 FMN2Q9NZ56 1722 aa17.49■□□□□ 0.39
LINC00642-201ENST00000419459 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
LINC00642-201ENST00000419459 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
LINC00642-201ENST00000419459 PANK3Q9H999 370 aa17.48■□□□□ 0.39
LINC00642-201ENST00000419459 CABP1Q9NZU7 370 aa17.48■□□□□ 0.39
LINC00642-201ENST00000419459 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
LINC00642-201ENST00000419459 C19orf44Q9H6X5 657 aa17.47■□□□□ 0.39
LINC00642-201ENST00000419459 PPIP5K1Q6PFW1 1433 aa17.46■□□□□ 0.39
LINC00642-201ENST00000419459 LTBP4Q8N2S1 1624 aa17.46■□□□□ 0.39
LINC00642-201ENST00000419459 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.38
LINC00642-201ENST00000419459 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
LINC00642-201ENST00000419459 CCDC61Q9Y6R9 512 aa17.44■□□□□ 0.38
LINC00642-201ENST00000419459 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
LINC00642-201ENST00000419459 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
LINC00642-201ENST00000419459 MSH6P52701 1360 aa17.43■□□□□ 0.38
LINC00642-201ENST00000419459 ITSN1Q15811 1721 aa17.43■□□□□ 0.38
LINC00642-201ENST00000419459 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
LINC00642-201ENST00000419459 ANP32CO43423 234 aa17.42■□□□□ 0.38
LINC00642-201ENST00000419459 PUS7Q96PZ0 661 aaKnown RBP17.42■□□□□ 0.38
LINC00642-201ENST00000419459 CARD14Q9BXL6 1004 aa17.42■□□□□ 0.38
LINC00642-201ENST00000419459 ATF3P18847 181 aa17.42■□□□□ 0.38
LINC00642-201ENST00000419459 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
LINC00642-201ENST00000419459 ORAI2Q96SN7 254 aa17.41■□□□□ 0.38
LINC00642-201ENST00000419459 ESCO1Q5FWF5 840 aa17.4■□□□□ 0.38
LINC00642-201ENST00000419459 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
LINC00642-201ENST00000419459 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
LINC00642-201ENST00000419459 MST1RQ04912 1400 aa17.39■□□□□ 0.37
LINC00642-201ENST00000419459 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.37
LINC00642-201ENST00000419459 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.37
LINC00642-201ENST00000419459 ACEP12821 1306 aa17.38■□□□□ 0.37
LINC00642-201ENST00000419459 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
LINC00642-201ENST00000419459 DCCP43146 1447 aa17.38■□□□□ 0.37
LINC00642-201ENST00000419459 CADPS2Q86UW7 1296 aa17.38■□□□□ 0.37
LINC00642-201ENST00000419459 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
LINC00642-201ENST00000419459 C1orf167Q5SNV9 1468 aa17.37■□□□□ 0.37
LINC00642-201ENST00000419459 CC2D1BQ5T0F9 858 aaKnown RBP17.37■□□□□ 0.37
LINC00642-201ENST00000419459 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
LINC00642-201ENST00000419459 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
LINC00642-201ENST00000419459 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
LINC00642-201ENST00000419459 MON2Q7Z3U7 1717 aa17.36■□□□□ 0.37
LINC00642-201ENST00000419459 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
LINC00642-201ENST00000419459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00642-201ENST00000419459 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
LINC00642-201ENST00000419459 KTN1Q86UP2 1357 aaKnown RBP17.35■□□□□ 0.37
LINC00642-201ENST00000419459 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
LINC00642-201ENST00000419459 HDGFL2Q7Z4V5 671 aaPredicted RBP17.35■□□□□ 0.37
LINC00642-201ENST00000419459 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
LINC00642-201ENST00000419459 FOXO3O43524 673 aa17.34■□□□□ 0.37
LINC00642-201ENST00000419459 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
LINC00642-201ENST00000419459 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms