RNA–Protein interactions for RNA: ENST00000419286.2

ATM-202, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-202ENST00000419286 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
ATM-202ENST00000419286 Q3C1V9 767 aa8.5□□□□□ -1.05
ATM-202ENST00000419286 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
ATM-202ENST00000419286 SLC6A16Q9GZN6 736 aa8.5□□□□□ -1.05
ATM-202ENST00000419286 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
ATM-202ENST00000419286 SPTLC1O15269 473 aa8.49□□□□□ -1.05
ATM-202ENST00000419286 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
ATM-202ENST00000419286 PRDM9Q9NQV7 894 aa8.49□□□□□ -1.05
ATM-202ENST00000419286 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
ATM-202ENST00000419286 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
ATM-202ENST00000419286 DDRGK1Q96HY6 314 aa8.48□□□□□ -1.05
ATM-202ENST00000419286 USB1Q9BQ65 265 aaKnown RBP8.48□□□□□ -1.05
ATM-202ENST00000419286 LIMD1Q9UGP4 676 aa8.48□□□□□ -1.05
ATM-202ENST00000419286 GJA5P36382 358 aa8.47□□□□□ -1.05
ATM-202ENST00000419286 IL27Q8NEV9 243 aa8.47□□□□□ -1.05
ATM-202ENST00000419286 POLR3EQ9NVU0 708 aa8.47□□□□□ -1.05
ATM-202ENST00000419286 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
ATM-202ENST00000419286 GGCXP38435 758 aa8.46□□□□□ -1.06
ATM-202ENST00000419286 MSS51Q4VC12 460 aa8.46□□□□□ -1.06
ATM-202ENST00000419286 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
ATM-202ENST00000419286 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
ATM-202ENST00000419286 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
ATM-202ENST00000419286 HRCP23327 699 aa8.43□□□□□ -1.06
ATM-202ENST00000419286 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
ATM-202ENST00000419286 MTMR2Q13614 643 aa8.43□□□□□ -1.06
ATM-202ENST00000419286 SKIV2LQ15477 1246 aaKnown RBP8.43□□□□□ -1.06
ATM-202ENST00000419286 QPCTQ16769 361 aa8.43□□□□□ -1.06
ATM-202ENST00000419286 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
ATM-202ENST00000419286 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
ATM-202ENST00000419286 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
ATM-202ENST00000419286 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
ATM-202ENST00000419286 EMID1Q96A84 441 aaPredicted RBP8.43□□□□□ -1.06
ATM-202ENST00000419286 MMP16P51512 607 aa8.42□□□□□ -1.06
ATM-202ENST00000419286 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
ATM-202ENST00000419286 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
ATM-202ENST00000419286 LILRB3O75022 631 aa8.41□□□□□ -1.06
ATM-202ENST00000419286 RGS20O76081 388 aa8.41□□□□□ -1.06
ATM-202ENST00000419286 DXOO77932 396 aaKnown RBP8.41□□□□□ -1.06
ATM-202ENST00000419286 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
ATM-202ENST00000419286 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
ATM-202ENST00000419286 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
ATM-202ENST00000419286 FCF1Q9Y324 198 aaKnown RBP8.41□□□□□ -1.06
ATM-202ENST00000419286 CFAP99D6REC4 459 aa8.4□□□□□ -1.06
ATM-202ENST00000419286 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
ATM-202ENST00000419286 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
ATM-202ENST00000419286 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
ATM-202ENST00000419286 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
ATM-202ENST00000419286 JUNDP17535 347 aa8.39□□□□□ -1.07
ATM-202ENST00000419286 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
ATM-202ENST00000419286 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
ATM-202ENST00000419286 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
ATM-202ENST00000419286 NUTM2DQ5VT03 806 aaPredicted RBP8.38□□□□□ -1.07
ATM-202ENST00000419286 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
ATM-202ENST00000419286 SLC19A1P41440 591 aa8.37□□□□□ -1.07
ATM-202ENST00000419286 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.37□□□□□ -1.07
ATM-202ENST00000419286 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
ATM-202ENST00000419286 GOPCQ9HD26 462 aa8.36□□□□□ -1.07
ATM-202ENST00000419286 ATP1B4Q9UN42 357 aaPredicted RBP8.36□□□□□ -1.07
ATM-202ENST00000419286 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
ATM-202ENST00000419286 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
ATM-202ENST00000419286 CCDC24Q8N4L8 307 aa8.35□□□□□ -1.07
ATM-202ENST00000419286 SPRYD7Q5W111 196 aa8.33□□□□□ -1.08
ATM-202ENST00000419286 PTCRAQ6ISU1 281 aaPredicted RBP8.33□□□□□ -1.08
ATM-202ENST00000419286 TSC1Q92574 1164 aa8.33□□□□□ -1.08
ATM-202ENST00000419286 NUDT12Q9BQG2 462 aa8.33□□□□□ -1.08
ATM-202ENST00000419286 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
ATM-202ENST00000419286 PTPRNQ16849 979 aa8.32□□□□□ -1.08
ATM-202ENST00000419286 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
ATM-202ENST00000419286 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
ATM-202ENST00000419286 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
ATM-202ENST00000419286 CCNYL3P0C7X3 344 aa8.31□□□□□ -1.08
ATM-202ENST00000419286 RPIAP49247 311 aa8.31□□□□□ -1.08
ATM-202ENST00000419286 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
ATM-202ENST00000419286 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
ATM-202ENST00000419286 ZBTB24O43167 697 aaPredicted RBP8.29□□□□□ -1.08
ATM-202ENST00000419286 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
ATM-202ENST00000419286 RFC5P40937 340 aa8.28□□□□□ -1.08
ATM-202ENST00000419286 KCNH2Q12809 1159 aa8.28□□□□□ -1.08
ATM-202ENST00000419286 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
ATM-202ENST00000419286 HELBQ8NG08 1087 aaPredicted RBP8.28□□□□□ -1.08
ATM-202ENST00000419286 CD2BP2O95400 341 aaKnown RBP8.27□□□□□ -1.09
ATM-202ENST00000419286 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
ATM-202ENST00000419286 TRIM32Q13049 653 aa8.27□□□□□ -1.09
ATM-202ENST00000419286 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
ATM-202ENST00000419286 MAP10Q9P2G4 905 aa8.27□□□□□ -1.09
ATM-202ENST00000419286 AP1G2O75843 785 aa8.26□□□□□ -1.09
ATM-202ENST00000419286 CTHP32929 405 aa8.26□□□□□ -1.09
ATM-202ENST00000419286 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
ATM-202ENST00000419286 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
ATM-202ENST00000419286 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
ATM-202ENST00000419286 GDF9O60383 454 aa8.24□□□□□ -1.09
ATM-202ENST00000419286 SKOR1P84550 965 aa8.24□□□□□ -1.09
ATM-202ENST00000419286 IRX2Q9BZI1 471 aaPredicted RBP8.24□□□□□ -1.09
ATM-202ENST00000419286 PKD2L1Q9P0L9 805 aa8.24□□□□□ -1.09
ATM-202ENST00000419286 FOXC1Q12948 553 aa8.23□□□□□ -1.09
ATM-202ENST00000419286 BAP1Q92560 729 aa8.23□□□□□ -1.09
ATM-202ENST00000419286 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
ATM-202ENST00000419286 TNFRSF10AO00220 468 aa8.22□□□□□ -1.09
ATM-202ENST00000419286 GFRA3O60609 400 aa8.22□□□□□ -1.09
ATM-202ENST00000419286 USP17L8P0C7I0 530 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms