RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 STAG3Q9UJ98 1225 aa27.47■■□□□ 1.99
FAM3A-208ENST00000419205 ZNF521Q96K83 1311 aa27.46■■□□□ 1.99
FAM3A-208ENST00000419205 SETD1AO15047 1707 aaKnown RBP27.46■■□□□ 1.99
FAM3A-208ENST00000419205 NSD2O96028 1365 aa27.46■■□□□ 1.99
FAM3A-208ENST00000419205 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
FAM3A-208ENST00000419205 CGNL1Q0VF96 1302 aa27.45■■□□□ 1.98
FAM3A-208ENST00000419205 DLC1Q96QB1 1528 aa27.43■■□□□ 1.98
FAM3A-208ENST00000419205 MORC1Q86VD1 984 aa27.43■■□□□ 1.98
FAM3A-208ENST00000419205 STK26Q9P289 416 aa27.43■■□□□ 1.98
FAM3A-208ENST00000419205 SHPRHQ149N8 1683 aa27.43■■□□□ 1.98
FAM3A-208ENST00000419205 RIMS2Q9UQ26 1411 aa27.43■■□□□ 1.98
FAM3A-208ENST00000419205 MLECQ14165 292 aa27.4■■□□□ 1.98
FAM3A-208ENST00000419205 ATAD2Q6PL18 1390 aa27.4■■□□□ 1.98
FAM3A-208ENST00000419205 CABP2Q9NPB3 220 aa27.4■■□□□ 1.98
FAM3A-208ENST00000419205 NGEFQ8N5V2 710 aa27.39■■□□□ 1.98
FAM3A-208ENST00000419205 ZMYM3Q14202 1370 aa27.39■■□□□ 1.98
FAM3A-208ENST00000419205 PRAM1Q96QH2 718 aa27.38■■□□□ 1.97
FAM3A-208ENST00000419205 RBM19Q9Y4C8 960 aaKnown RBP27.37■■□□□ 1.97
FAM3A-208ENST00000419205 SAFB2Q14151 953 aaKnown RBP eCLIP27.37■■□□□ 1.97
FAM3A-208ENST00000419205 NRXN3Q9Y4C0 1643 aa27.36■■□□□ 1.97
FAM3A-208ENST00000419205 CCDC136Q96JN2 1154 aa27.35■■□□□ 1.97
FAM3A-208ENST00000419205 POGKQ9P215 609 aa27.35■■□□□ 1.97
FAM3A-208ENST00000419205 ABCC11Q96J66 1382 aa27.35■■□□□ 1.97
FAM3A-208ENST00000419205 GOLGA2Q08379 1002 aa27.35■■□□□ 1.97
FAM3A-208ENST00000419205 ESF1Q9H501 851 aaKnown RBP27.35■■□□□ 1.97
FAM3A-208ENST00000419205 ANKRD26Q9UPS8 1709 aa27.34■■□□□ 1.97
FAM3A-208ENST00000419205 A0A1W2PP64 1363 aa27.34■■□□□ 1.97
FAM3A-208ENST00000419205 SRPK2P78362 688 aaKnown RBP27.33■■□□□ 1.97
FAM3A-208ENST00000419205 DUSP27Q5VZP5 1158 aa27.33■■□□□ 1.97
FAM3A-208ENST00000419205 CCDC146Q8IYE0 955 aa27.32■■□□□ 1.96
FAM3A-208ENST00000419205 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.32■■□□□ 1.96
FAM3A-208ENST00000419205 MINK1Q8N4C8 1332 aaPredicted RBP27.32■■□□□ 1.96
FAM3A-208ENST00000419205 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
FAM3A-208ENST00000419205 CD163L1Q9NR16 1453 aa27.3■■□□□ 1.96
FAM3A-208ENST00000419205 APAF1O14727 1248 aa27.3■■□□□ 1.96
FAM3A-208ENST00000419205 TRMT2AQ8IZ69 625 aaKnown RBP27.3■■□□□ 1.96
FAM3A-208ENST00000419205 MED14O60244 1454 aa27.3■■□□□ 1.96
FAM3A-208ENST00000419205 SLFN5Q08AF3 891 aa27.29■■□□□ 1.96
FAM3A-208ENST00000419205 KNDC1Q76NI1 1749 aa27.28■■□□□ 1.96
FAM3A-208ENST00000419205 TNRQ92752 1358 aa27.28■■□□□ 1.96
FAM3A-208ENST00000419205 TERF2IPQ9NYB0 399 aa27.27■■□□□ 1.96
FAM3A-208ENST00000419205 UBR1Q8IWV7 1749 aa27.26■■□□□ 1.95
FAM3A-208ENST00000419205 EXOC6Q8TAG9 804 aa27.26■■□□□ 1.95
FAM3A-208ENST00000419205 CFAP53Q96M91 514 aa27.26■■□□□ 1.95
FAM3A-208ENST00000419205 TNNT2P45379 298 aaPredicted RBP27.25■■□□□ 1.95
FAM3A-208ENST00000419205 MTHFSP49914 203 aa27.25■■□□□ 1.95
FAM3A-208ENST00000419205 IQSEC2Q5JU85 1478 aa27.24■■□□□ 1.95
FAM3A-208ENST00000419205 TRHP20396 242 aaPredicted RBP27.24■■□□□ 1.95
FAM3A-208ENST00000419205 CDK19Q9BWU1 502 aa27.24■■□□□ 1.95
FAM3A-208ENST00000419205 NLRP1Q9C000 1473 aa27.23■■□□□ 1.95
FAM3A-208ENST00000419205 KIF20BQ96Q89 1820 aa27.22■■□□□ 1.95
FAM3A-208ENST00000419205 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
FAM3A-208ENST00000419205 NKTRP30414 1462 aaKnown RBP27.21■■□□□ 1.95
FAM3A-208ENST00000419205 E9PSI1 815 aa27.2■■□□□ 1.95
FAM3A-208ENST00000419205 RUNDC1Q96C34 613 aa27.2■■□□□ 1.95
FAM3A-208ENST00000419205 ATP7BP35670 1465 aa27.2■■□□□ 1.94
FAM3A-208ENST00000419205 TECPR2O15040 1411 aa27.19■■□□□ 1.94
FAM3A-208ENST00000419205 HDGFL2Q7Z4V5 671 aaPredicted RBP27.19■■□□□ 1.94
FAM3A-208ENST00000419205 METP08581 1390 aa27.18■■□□□ 1.94
FAM3A-208ENST00000419205 CPS1P31327 1500 aa27.18■■□□□ 1.94
FAM3A-208ENST00000419205 FAM135BQ49AJ0 1406 aa27.17■■□□□ 1.94
FAM3A-208ENST00000419205 TMEM2Q9UHN6 1383 aa27.17■■□□□ 1.94
FAM3A-208ENST00000419205 PLIN1O60240 522 aa27.17■■□□□ 1.94
FAM3A-208ENST00000419205 SIRT1Q96EB6 747 aa27.17■■□□□ 1.94
FAM3A-208ENST00000419205 NCBP3Q53F19 620 aaKnown RBP27.16■■□□□ 1.94
FAM3A-208ENST00000419205 FYB1O15117 783 aa27.15■■□□□ 1.94
FAM3A-208ENST00000419205 WAPLQ7Z5K2 1190 aa27.15■■□□□ 1.94
FAM3A-208ENST00000419205 SPINK5Q9NQ38 1064 aaPredicted RBP27.15■■□□□ 1.94
FAM3A-208ENST00000419205 COL3A1P02461 1466 aaPredicted RBP27.15■■□□□ 1.94
FAM3A-208ENST00000419205 WWC1Q8IX03 1113 aa27.14■■□□□ 1.93
FAM3A-208ENST00000419205 ADGRB2O60241 1585 aa27.13■■□□□ 1.93
FAM3A-208ENST00000419205 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
FAM3A-208ENST00000419205 CABP1Q9NZU7 370 aa27.13■■□□□ 1.93
FAM3A-208ENST00000419205 GGNBP2Q9H3C7 697 aa27.12■■□□□ 1.93
FAM3A-208ENST00000419205 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.12■■□□□ 1.93
FAM3A-208ENST00000419205 CRBNQ96SW2 442 aa27.12■■□□□ 1.93
FAM3A-208ENST00000419205 FANCIQ9NVI1 1328 aa27.1■■□□□ 1.93
FAM3A-208ENST00000419205 CCDC27Q2M243 656 aa27.1■■□□□ 1.93
FAM3A-208ENST00000419205 TCP11L2Q8N4U5 519 aa27.09■■□□□ 1.93
FAM3A-208ENST00000419205 DMRT2Q9Y5R5 561 aa27.09■■□□□ 1.93
FAM3A-208ENST00000419205 WASLO00401 505 aaPredicted RBP27.08■■□□□ 1.93
FAM3A-208ENST00000419205 C3P01024 1663 aa27.08■■□□□ 1.93
FAM3A-208ENST00000419205 WDR63Q8IWG1 891 aa27.07■■□□□ 1.92
FAM3A-208ENST00000419205 CPSF1Q10570 1443 aaKnown RBP27.06■■□□□ 1.92
FAM3A-208ENST00000419205 ADAMTS13Q76LX8 1427 aa27.06■■□□□ 1.92
FAM3A-208ENST00000419205 PLEKHG1Q9ULL1 1385 aa27.06■■□□□ 1.92
FAM3A-208ENST00000419205 C20orf194Q5TEA3 1177 aa27.05■■□□□ 1.92
FAM3A-208ENST00000419205 PNPLA6Q8IY17 1366 aa27.05■■□□□ 1.92
FAM3A-208ENST00000419205 U2AF1L5P0DN76 240 aaPredicted RBP27.04■■□□□ 1.92
FAM3A-208ENST00000419205 U2AF1Q01081 240 aaKnown RBP eCLIP27.04■■□□□ 1.92
FAM3A-208ENST00000419205 CDC42BPGQ6DT37 1551 aa27.04■■□□□ 1.92
FAM3A-208ENST00000419205 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
FAM3A-208ENST00000419205 MON2Q7Z3U7 1717 aa27.03■■□□□ 1.92
FAM3A-208ENST00000419205 EDC4Q6P2E9 1401 aaKnown RBP27.03■■□□□ 1.92
FAM3A-208ENST00000419205 PPIP5K1Q6PFW1 1433 aa27.03■■□□□ 1.92
FAM3A-208ENST00000419205 TXNDC2Q86VQ3 553 aa27.03■■□□□ 1.92
FAM3A-208ENST00000419205 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
FAM3A-208ENST00000419205 RRP7AQ9Y3A4 280 aaKnown RBP27■■□□□ 1.91
FAM3A-208ENST00000419205 SLIT1O75093 1534 aa27■■□□□ 1.91
FAM3A-208ENST00000419205 ITSN1Q15811 1721 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms