RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 EVC2Q86UK5 1308 aa19.05■□□□□ 0.64
CHMP5-202ENST00000419016 AMOTL2Q9Y2J4 779 aa19.05■□□□□ 0.64
CHMP5-202ENST00000419016 XRN1Q8IZH2 1706 aaKnown RBP19.04■□□□□ 0.64
CHMP5-202ENST00000419016 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
CHMP5-202ENST00000419016 MYOM1P52179 1685 aa19.03■□□□□ 0.64
CHMP5-202ENST00000419016 PER1O15534 1290 aaPredicted RBP19.03■□□□□ 0.64
CHMP5-202ENST00000419016 MINK1Q8N4C8 1332 aaPredicted RBP19.03■□□□□ 0.64
CHMP5-202ENST00000419016 HSPA2P54652 639 aa19.01■□□□□ 0.63
CHMP5-202ENST00000419016 PANK3Q9H999 370 aa19.01■□□□□ 0.63
CHMP5-202ENST00000419016 ANP32CO43423 234 aa19■□□□□ 0.63
CHMP5-202ENST00000419016 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
CHMP5-202ENST00000419016 KCNA6P17658 529 aa18.99■□□□□ 0.63
CHMP5-202ENST00000419016 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
CHMP5-202ENST00000419016 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
CHMP5-202ENST00000419016 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
CHMP5-202ENST00000419016 ADGRB2O60241 1585 aa18.97■□□□□ 0.63
CHMP5-202ENST00000419016 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
CHMP5-202ENST00000419016 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
CHMP5-202ENST00000419016 SLC12A5Q9H2X9 1139 aa18.95■□□□□ 0.62
CHMP5-202ENST00000419016 ATAD2Q6PL18 1390 aa18.95■□□□□ 0.62
CHMP5-202ENST00000419016 SRPK2P78362 688 aaKnown RBP18.94■□□□□ 0.62
CHMP5-202ENST00000419016 NINLQ9Y2I6 1382 aa18.94■□□□□ 0.62
CHMP5-202ENST00000419016 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
CHMP5-202ENST00000419016 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
CHMP5-202ENST00000419016 CARD14Q9BXL6 1004 aa18.92■□□□□ 0.62
CHMP5-202ENST00000419016 CCER2I3L3R5 266 aa18.92■□□□□ 0.62
CHMP5-202ENST00000419016 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
CHMP5-202ENST00000419016 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
CHMP5-202ENST00000419016 ANKRD36BQ8N2N9 1353 aa18.89■□□□□ 0.61
CHMP5-202ENST00000419016 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
CHMP5-202ENST00000419016 KTN1Q86UP2 1357 aaKnown RBP18.88■□□□□ 0.61
CHMP5-202ENST00000419016 CD163L1Q9NR16 1453 aa18.88■□□□□ 0.61
CHMP5-202ENST00000419016 NUDT16Q96DE0 195 aaKnown RBP18.87■□□□□ 0.61
CHMP5-202ENST00000419016 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
CHMP5-202ENST00000419016 ATP7BP35670 1465 aa18.87■□□□□ 0.61
CHMP5-202ENST00000419016 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
CHMP5-202ENST00000419016 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
CHMP5-202ENST00000419016 CABP1Q9NZU7 370 aa18.86■□□□□ 0.61
CHMP5-202ENST00000419016 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
CHMP5-202ENST00000419016 CCDC61Q9Y6R9 512 aa18.85■□□□□ 0.61
CHMP5-202ENST00000419016 RALBP1Q15311 655 aa18.84■□□□□ 0.61
CHMP5-202ENST00000419016 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
CHMP5-202ENST00000419016 NSD3Q9BZ95 1437 aa18.82■□□□□ 0.6
CHMP5-202ENST00000419016 ADGRL3Q9HAR2 1447 aa18.82■□□□□ 0.6
CHMP5-202ENST00000419016 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
CHMP5-202ENST00000419016 CPSF1Q10570 1443 aaKnown RBP18.82■□□□□ 0.6
CHMP5-202ENST00000419016 PPIP5K1Q6PFW1 1433 aa18.82■□□□□ 0.6
CHMP5-202ENST00000419016 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
CHMP5-202ENST00000419016 STRCP1A6NGW2 1772 aa18.82■□□□□ 0.6
CHMP5-202ENST00000419016 CDC42BPGQ6DT37 1551 aa18.81■□□□□ 0.6
CHMP5-202ENST00000419016 USP32Q8NFA0 1604 aa18.81■□□□□ 0.6
CHMP5-202ENST00000419016 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
CHMP5-202ENST00000419016 CC2D1BQ5T0F9 858 aaKnown RBP18.81■□□□□ 0.6
CHMP5-202ENST00000419016 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
CHMP5-202ENST00000419016 RBM33Q96EV2 1170 aaKnown RBP18.8■□□□□ 0.6
CHMP5-202ENST00000419016 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
CHMP5-202ENST00000419016 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
CHMP5-202ENST00000419016 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
CHMP5-202ENST00000419016 PROSER2Q86WR7 435 aaPredicted RBP18.79■□□□□ 0.6
CHMP5-202ENST00000419016 FMN2Q9NZ56 1722 aa18.79■□□□□ 0.6
CHMP5-202ENST00000419016 NCOA3Q9Y6Q9 1424 aa18.78■□□□□ 0.6
CHMP5-202ENST00000419016 HDGFL2Q7Z4V5 671 aaPredicted RBP18.78■□□□□ 0.6
CHMP5-202ENST00000419016 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
CHMP5-202ENST00000419016 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
CHMP5-202ENST00000419016 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
CHMP5-202ENST00000419016 NUTM2FA1L443 756 aa18.75■□□□□ 0.59
CHMP5-202ENST00000419016 NSD2O96028 1365 aa18.74■□□□□ 0.59
CHMP5-202ENST00000419016 TMEM94Q12767 1356 aa18.74■□□□□ 0.59
CHMP5-202ENST00000419016 ZNF692Q9BU19 519 aaPredicted RBP18.73■□□□□ 0.59
CHMP5-202ENST00000419016 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
CHMP5-202ENST00000419016 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
CHMP5-202ENST00000419016 EDC4Q6P2E9 1401 aaKnown RBP18.73■□□□□ 0.59
CHMP5-202ENST00000419016 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
CHMP5-202ENST00000419016 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
CHMP5-202ENST00000419016 ACEP12821 1306 aa18.72■□□□□ 0.59
CHMP5-202ENST00000419016 NLRP13Q86W25 1043 aa18.72■□□□□ 0.59
CHMP5-202ENST00000419016 ITSN1Q15811 1721 aa18.72■□□□□ 0.59
CHMP5-202ENST00000419016 ZNF335Q9H4Z2 1342 aaPredicted RBP18.72■□□□□ 0.59
CHMP5-202ENST00000419016 FYB1O15117 783 aa18.72■□□□□ 0.59
CHMP5-202ENST00000419016 MON2Q7Z3U7 1717 aa18.71■□□□□ 0.59
CHMP5-202ENST00000419016 RGPD8O14715 1765 aaPredicted RBP18.71■□□□□ 0.59
CHMP5-202ENST00000419016 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
CHMP5-202ENST00000419016 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
CHMP5-202ENST00000419016 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
CHMP5-202ENST00000419016 C14orf37Q86TY3 774 aa18.7■□□□□ 0.58
CHMP5-202ENST00000419016 DCCP43146 1447 aa18.69■□□□□ 0.58
CHMP5-202ENST00000419016 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
CHMP5-202ENST00000419016 USP6P35125 1406 aa18.68■□□□□ 0.58
CHMP5-202ENST00000419016 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
CHMP5-202ENST00000419016 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
CHMP5-202ENST00000419016 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
CHMP5-202ENST00000419016 NRKQ7Z2Y5 1582 aa18.67■□□□□ 0.58
CHMP5-202ENST00000419016 PNISRQ8TF01 805 aaKnown RBP18.66■□□□□ 0.58
CHMP5-202ENST00000419016 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
CHMP5-202ENST00000419016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.58
CHMP5-202ENST00000419016 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.58
CHMP5-202ENST00000419016 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
CHMP5-202ENST00000419016 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
CHMP5-202ENST00000419016 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
CHMP5-202ENST00000419016 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms