RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 PIK3C2GO75747 1445 aa27.37■■□□□ 1.97
COPS8-204ENST00000419015 KNDC1Q76NI1 1749 aa27.37■■□□□ 1.97
COPS8-204ENST00000419015 UPF1Q92900 1129 aaKnown RBP eCLIP27.36■■□□□ 1.97
COPS8-204ENST00000419015 C8orf37Q96NL8 207 aa27.36■■□□□ 1.97
COPS8-204ENST00000419015 LRPPRCP42704 1394 aaKnown RBP27.35■■□□□ 1.97
COPS8-204ENST00000419015 COL22A1Q8NFW1 1626 aaPredicted RBP27.34■■□□□ 1.97
COPS8-204ENST00000419015 ABCC11Q96J66 1382 aa27.33■■□□□ 1.97
COPS8-204ENST00000419015 WAPLQ7Z5K2 1190 aa27.31■■□□□ 1.96
COPS8-204ENST00000419015 PXDNQ92626 1479 aa27.31■■□□□ 1.96
COPS8-204ENST00000419015 TMEM132EQ6IEE7 984 aa27.3■■□□□ 1.96
COPS8-204ENST00000419015 QTRT2Q9H974 415 aaKnown RBP27.3■■□□□ 1.96
COPS8-204ENST00000419015 STK26Q9P289 416 aa27.3■■□□□ 1.96
COPS8-204ENST00000419015 ADAMTS2O95450 1211 aa27.29■■□□□ 1.96
COPS8-204ENST00000419015 PLEKHH1Q9ULM0 1364 aa27.29■■□□□ 1.96
COPS8-204ENST00000419015 RGS12O14924 1447 aa27.29■■□□□ 1.96
COPS8-204ENST00000419015 NPHP3Q7Z494 1330 aa27.28■■□□□ 1.96
COPS8-204ENST00000419015 ESCO1Q5FWF5 840 aa27.28■■□□□ 1.96
COPS8-204ENST00000419015 NRXN1Q9ULB1 1477 aa27.27■■□□□ 1.96
COPS8-204ENST00000419015 RBM6P78332 1123 aaKnown RBP27.27■■□□□ 1.96
COPS8-204ENST00000419015 MYOM2P54296 1465 aa27.26■■□□□ 1.95
COPS8-204ENST00000419015 YTHDC2Q9H6S0 1430 aaKnown RBP27.26■■□□□ 1.95
COPS8-204ENST00000419015 ACIN1Q9UKV3 1341 aaKnown RBP27.26■■□□□ 1.95
COPS8-204ENST00000419015 NGLY1Q96IV0 654 aa27.26■■□□□ 1.95
COPS8-204ENST00000419015 FMN2Q9NZ56 1722 aa27.26■■□□□ 1.95
COPS8-204ENST00000419015 FNBP4Q8N3X1 1017 aaPredicted RBP27.23■■□□□ 1.95
COPS8-204ENST00000419015 C14orf93Q9H972 538 aaKnown RBP27.23■■□□□ 1.95
COPS8-204ENST00000419015 MARF1Q9Y4F3 1742 aaKnown RBP27.22■■□□□ 1.95
COPS8-204ENST00000419015 FOXO3O43524 673 aa27.22■■□□□ 1.95
COPS8-204ENST00000419015 SIRT1Q96EB6 747 aa27.21■■□□□ 1.95
COPS8-204ENST00000419015 NUTM2FA1L443 756 aa27.2■■□□□ 1.94
COPS8-204ENST00000419015 XPCQ01831 940 aaPredicted RBP27.19■■□□□ 1.94
COPS8-204ENST00000419015 USP21Q9UK80 565 aa27.19■■□□□ 1.94
COPS8-204ENST00000419015 KIF1AQ12756 1690 aa27.18■■□□□ 1.94
COPS8-204ENST00000419015 RGPD8O14715 1765 aaPredicted RBP27.18■■□□□ 1.94
COPS8-204ENST00000419015 RAB3GAP2Q9H2M9 1393 aa27.18■■□□□ 1.94
COPS8-204ENST00000419015 ATRNO75882 1429 aa27.16■■□□□ 1.94
COPS8-204ENST00000419015 CFAP70Q5T0N1 1121 aa27.16■■□□□ 1.94
COPS8-204ENST00000419015 TRPC5Q9UL62 973 aaPredicted RBP27.15■■□□□ 1.94
COPS8-204ENST00000419015 BCL9LQ86UU0 1499 aa27.14■■□□□ 1.94
COPS8-204ENST00000419015 EP400Q96L91 3159 aa27.13■■□□□ 1.93
COPS8-204ENST00000419015 DHX57Q6P158 1386 aaKnown RBP27.12■■□□□ 1.93
COPS8-204ENST00000419015 SPATA31A3Q5VYP0 1347 aa27.11■■□□□ 1.93
COPS8-204ENST00000419015 DLC1Q96QB1 1528 aa27.09■■□□□ 1.93
COPS8-204ENST00000419015 ADGRB1O14514 1584 aa27.09■■□□□ 1.93
COPS8-204ENST00000419015 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.08■■□□□ 1.93
COPS8-204ENST00000419015 PRAM1Q96QH2 718 aa27.07■■□□□ 1.92
COPS8-204ENST00000419015 KRT28Q7Z3Y7 464 aa27.06■■□□□ 1.92
COPS8-204ENST00000419015 USP32Q8NFA0 1604 aa27.05■■□□□ 1.92
COPS8-204ENST00000419015 PHF8Q9UPP1 1060 aa27.04■■□□□ 1.92
COPS8-204ENST00000419015 ATAD2Q6PL18 1390 aa27.04■■□□□ 1.92
COPS8-204ENST00000419015 SLIT2O94813 1529 aa27.04■■□□□ 1.92
COPS8-204ENST00000419015 ADGRB2O60241 1585 aa27.04■■□□□ 1.92
COPS8-204ENST00000419015 TNS3Q68CZ2 1445 aa27.02■■□□□ 1.92
COPS8-204ENST00000419015 SAFB2Q14151 953 aaKnown RBP eCLIP27.02■■□□□ 1.92
COPS8-204ENST00000419015 GJD4Q96KN9 370 aaPredicted RBP27■■□□□ 1.91
COPS8-204ENST00000419015 ABCA3Q99758 1704 aa26.99■■□□□ 1.91
COPS8-204ENST00000419015 SRCAPQ6ZRS2 3230 aa26.99■■□□□ 1.91
COPS8-204ENST00000419015 ANKARQ7Z5J8 1434 aa26.99■■□□□ 1.91
COPS8-204ENST00000419015 SBNO1A3KN83 1393 aa26.98■■□□□ 1.91
COPS8-204ENST00000419015 GLI3P10071 1580 aa26.98■■□□□ 1.91
COPS8-204ENST00000419015 UNC5CLQ8IV45 518 aa26.97■■□□□ 1.91
COPS8-204ENST00000419015 HRCP23327 699 aa26.96■■□□□ 1.91
COPS8-204ENST00000419015 PSME1Q06323 249 aa26.96■■□□□ 1.91
COPS8-204ENST00000419015 POGKQ9P215 609 aa26.96■■□□□ 1.91
COPS8-204ENST00000419015 TRAK1Q9UPV9 953 aa26.95■■□□□ 1.9
COPS8-204ENST00000419015 RALGAPBQ86X10 1494 aa26.94■■□□□ 1.9
COPS8-204ENST00000419015 TRPM3Q9HCF6 1732 aaPredicted RBP26.94■■□□□ 1.9
COPS8-204ENST00000419015 DCAF11Q8TEB1 546 aa26.94■■□□□ 1.9
COPS8-204ENST00000419015 PLCH1Q4KWH8 1693 aa26.93■■□□□ 1.9
COPS8-204ENST00000419015 CABLES1Q8TDN4 633 aa26.93■■□□□ 1.9
COPS8-204ENST00000419015 KDM2AQ9Y2K7 1162 aa26.93■■□□□ 1.9
COPS8-204ENST00000419015 NWD2Q9ULI1 1742 aa26.93■■□□□ 1.9
COPS8-204ENST00000419015 PMFBP1Q8TBY8 1022 aa26.92■■□□□ 1.9
COPS8-204ENST00000419015 STAC3Q96MF2 364 aa26.91■■□□□ 1.9
COPS8-204ENST00000419015 HIRIP3Q9BW71 556 aaPredicted RBP26.91■■□□□ 1.9
COPS8-204ENST00000419015 ARHGEF10O15013 1369 aa26.91■■□□□ 1.9
COPS8-204ENST00000419015 PRR36Q9H6K5 1346 aa26.9■■□□□ 1.9
COPS8-204ENST00000419015 ALS2Q96Q42 1657 aa26.9■■□□□ 1.9
COPS8-204ENST00000419015 BRWD3Q6RI45 1802 aa26.9■■□□□ 1.9
COPS8-204ENST00000419015 TULP4Q9NRJ4 1543 aa26.9■■□□□ 1.9
COPS8-204ENST00000419015 ARHGEF28Q8N1W1 1705 aaKnown RBP26.89■■□□□ 1.9
COPS8-204ENST00000419015 MINK1Q8N4C8 1332 aaPredicted RBP26.87■■□□□ 1.89
COPS8-204ENST00000419015 EIF3AQ14152 1382 aaKnown RBP26.85■■□□□ 1.89
COPS8-204ENST00000419015 WASLO00401 505 aaPredicted RBP26.85■■□□□ 1.89
COPS8-204ENST00000419015 HAP1P54257 671 aaPredicted RBP26.85■■□□□ 1.89
COPS8-204ENST00000419015 VPS72Q15906 364 aa26.85■■□□□ 1.89
COPS8-204ENST00000419015 LMOD2Q6P5Q4 547 aa26.84■■□□□ 1.89
COPS8-204ENST00000419015 CCDC125Q86Z20 511 aa26.84■■□□□ 1.89
COPS8-204ENST00000419015 CRYBG1Q9Y4K1 1723 aa26.83■■□□□ 1.89
COPS8-204ENST00000419015 NRAPQ86VF7 1730 aa26.82■■□□□ 1.88
COPS8-204ENST00000419015 PLEKHG5O94827 1062 aa26.82■■□□□ 1.88
COPS8-204ENST00000419015 FAM83GA6ND36 823 aa26.81■■□□□ 1.88
COPS8-204ENST00000419015 ONECUT3O60422 494 aaPredicted RBP26.81■■□□□ 1.88
COPS8-204ENST00000419015 GPRASP1Q5JY77 1395 aa26.8■■□□□ 1.88
COPS8-204ENST00000419015 ITSN1Q15811 1721 aa26.79■■□□□ 1.88
COPS8-204ENST00000419015 ATP7BP35670 1465 aa26.79■■□□□ 1.88
COPS8-204ENST00000419015 SEPT12Q8IYM1 358 aa26.78■■□□□ 1.88
COPS8-204ENST00000419015 KIAA1210Q9ULL0 1709 aa26.77■■□□□ 1.88
COPS8-204ENST00000419015 COL14A1Q05707 1796 aaKnown RBP26.76■■□□□ 1.88
COPS8-204ENST00000419015 BLMP54132 1417 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms