RNA–Protein interactions for RNA: ENST00000418983.1

HCG4-201, Transcript of HLA complex group 4, humanhuman

BASIC

Gene HCG4, Length 998 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG4-201ENST00000418983 USP47Q96K76 1375 aa23.74■■□□□ 1.39
HCG4-201ENST00000418983 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
HCG4-201ENST00000418983 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
HCG4-201ENST00000418983 NCOA3Q9Y6Q9 1424 aa23.71■■□□□ 1.39
HCG4-201ENST00000418983 POGKQ9P215 609 aa23.71■■□□□ 1.39
HCG4-201ENST00000418983 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.38
HCG4-201ENST00000418983 CENPJQ9HC77 1338 aaPredicted RBP23.7■■□□□ 1.38
HCG4-201ENST00000418983 POTEAQ6S8J7 498 aa23.7■■□□□ 1.38
HCG4-201ENST00000418983 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
HCG4-201ENST00000418983 SBNO2Q9Y2G9 1366 aa23.67■■□□□ 1.38
HCG4-201ENST00000418983 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
HCG4-201ENST00000418983 QRICH2Q9H0J4 1663 aa23.67■■□□□ 1.38
HCG4-201ENST00000418983 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
HCG4-201ENST00000418983 TMEM94Q12767 1356 aa23.63■■□□□ 1.37
HCG4-201ENST00000418983 ADGRB2O60241 1585 aa23.62■■□□□ 1.37
HCG4-201ENST00000418983 ST20-MTHFSA0A0A6YYL1 179 aa23.62■■□□□ 1.37
HCG4-201ENST00000418983 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
HCG4-201ENST00000418983 ADGRL3Q9HAR2 1447 aa23.61■■□□□ 1.37
HCG4-201ENST00000418983 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
HCG4-201ENST00000418983 PLEKHH1Q9ULM0 1364 aa23.61■■□□□ 1.37
HCG4-201ENST00000418983 C14orf37Q86TY3 774 aa23.59■■□□□ 1.37
HCG4-201ENST00000418983 NALCNQ8IZF0 1738 aa23.59■■□□□ 1.37
HCG4-201ENST00000418983 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
HCG4-201ENST00000418983 DCCP43146 1447 aa23.59■■□□□ 1.37
HCG4-201ENST00000418983 CDC42BPGQ6DT37 1551 aa23.58■■□□□ 1.37
HCG4-201ENST00000418983 MSH6P52701 1360 aa23.57■■□□□ 1.36
HCG4-201ENST00000418983 SAFB2Q14151 953 aaKnown RBP eCLIP23.57■■□□□ 1.36
HCG4-201ENST00000418983 C19orf44Q9H6X5 657 aa23.56■■□□□ 1.36
HCG4-201ENST00000418983 EVC2Q86UK5 1308 aa23.56■■□□□ 1.36
HCG4-201ENST00000418983 TESK2Q96S53 571 aa23.55■■□□□ 1.36
HCG4-201ENST00000418983 MINK1Q8N4C8 1332 aaPredicted RBP23.55■■□□□ 1.36
HCG4-201ENST00000418983 TMF1P82094 1093 aa23.54■■□□□ 1.36
HCG4-201ENST00000418983 CDCA8Q53HL2 280 aa23.54■■□□□ 1.36
HCG4-201ENST00000418983 PUS7Q96PZ0 661 aaKnown RBP23.51■■□□□ 1.35
HCG4-201ENST00000418983 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
HCG4-201ENST00000418983 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
HCG4-201ENST00000418983 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
HCG4-201ENST00000418983 ATF3P18847 181 aa23.49■■□□□ 1.35
HCG4-201ENST00000418983 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
HCG4-201ENST00000418983 HIRIP3Q9BW71 556 aaPredicted RBP23.49■■□□□ 1.35
HCG4-201ENST00000418983 PHLPP1O60346 1717 aa23.48■■□□□ 1.35
HCG4-201ENST00000418983 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
HCG4-201ENST00000418983 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
HCG4-201ENST00000418983 CDK19Q9BWU1 502 aa23.46■■□□□ 1.35
HCG4-201ENST00000418983 COL16A1Q07092 1604 aaPredicted RBP23.45■■□□□ 1.34
HCG4-201ENST00000418983 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.34
HCG4-201ENST00000418983 SRPK2P78362 688 aaKnown RBP23.45■■□□□ 1.34
HCG4-201ENST00000418983 JCADQ9P266 1359 aa23.43■■□□□ 1.34
HCG4-201ENST00000418983 ITSN1Q15811 1721 aa23.43■■□□□ 1.34
HCG4-201ENST00000418983 NINLQ9Y2I6 1382 aa23.4■■□□□ 1.34
HCG4-201ENST00000418983 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
HCG4-201ENST00000418983 ATP7BP35670 1465 aa23.4■■□□□ 1.34
HCG4-201ENST00000418983 MST1RQ04912 1400 aa23.4■■□□□ 1.34
HCG4-201ENST00000418983 LRP6O75581 1613 aa23.4■■□□□ 1.34
HCG4-201ENST00000418983 CABP2Q9NPB3 220 aa23.38■■□□□ 1.33
HCG4-201ENST00000418983 C1orf167Q5SNV9 1468 aa23.37■■□□□ 1.33
HCG4-201ENST00000418983 NUDT16Q96DE0 195 aaKnown RBP23.37■■□□□ 1.33
HCG4-201ENST00000418983 CCDC61Q9Y6R9 512 aa23.37■■□□□ 1.33
HCG4-201ENST00000418983 TOPAZ1Q8N9V7 1692 aa23.37■■□□□ 1.33
HCG4-201ENST00000418983 USP32Q8NFA0 1604 aa23.37■■□□□ 1.33
HCG4-201ENST00000418983 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
HCG4-201ENST00000418983 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
HCG4-201ENST00000418983 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
HCG4-201ENST00000418983 CCDC7Q96M83 1385 aa23.35■■□□□ 1.33
HCG4-201ENST00000418983 KIF1AQ12756 1690 aa23.35■■□□□ 1.33
HCG4-201ENST00000418983 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
HCG4-201ENST00000418983 PRR36Q9H6K5 1346 aa23.33■■□□□ 1.33
HCG4-201ENST00000418983 PPIP5K1Q6PFW1 1433 aa23.33■■□□□ 1.32
HCG4-201ENST00000418983 RGPD8O14715 1765 aaPredicted RBP23.32■■□□□ 1.32
HCG4-201ENST00000418983 CDK12Q9NYV4 1490 aaPredicted RBP23.32■■□□□ 1.32
HCG4-201ENST00000418983 AHDC1Q5TGY3 1603 aaPredicted RBP23.32■■□□□ 1.32
HCG4-201ENST00000418983 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
HCG4-201ENST00000418983 NUTM2FA1L443 756 aa23.31■■□□□ 1.32
HCG4-201ENST00000418983 C11orf95C9JLR9 678 aaPredicted RBP23.3■■□□□ 1.32
HCG4-201ENST00000418983 WASHC2AQ641Q2 1341 aa23.3■■□□□ 1.32
HCG4-201ENST00000418983 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
HCG4-201ENST00000418983 ESCO1Q5FWF5 840 aa23.29■■□□□ 1.32
HCG4-201ENST00000418983 POLR3GLQ9BT43 218 aa23.29■■□□□ 1.32
HCG4-201ENST00000418983 MYOM1P52179 1685 aa23.28■■□□□ 1.32
HCG4-201ENST00000418983 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
HCG4-201ENST00000418983 PHF8Q9UPP1 1060 aa23.28■■□□□ 1.32
HCG4-201ENST00000418983 ZNF772Q68DY9 489 aaPredicted RBP23.27■■□□□ 1.32
HCG4-201ENST00000418983 TERF2IPQ9NYB0 399 aa23.27■■□□□ 1.32
HCG4-201ENST00000418983 CABP1Q9NZU7 370 aa23.26■■□□□ 1.31
HCG4-201ENST00000418983 POLR3AO14802 1390 aaPredicted RBP23.25■■□□□ 1.31
HCG4-201ENST00000418983 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
HCG4-201ENST00000418983 ORAI2Q96SN7 254 aa23.24■■□□□ 1.31
HCG4-201ENST00000418983 ZNF692Q9BU19 519 aaPredicted RBP23.24■■□□□ 1.31
HCG4-201ENST00000418983 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
HCG4-201ENST00000418983 ANKRD36BQ8N2N9 1353 aa23.24■■□□□ 1.31
HCG4-201ENST00000418983 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
HCG4-201ENST00000418983 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
HCG4-201ENST00000418983 BRD4O60885 1362 aaPredicted RBP23.23■■□□□ 1.31
HCG4-201ENST00000418983 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
HCG4-201ENST00000418983 SLC12A5Q9H2X9 1139 aa23.22■■□□□ 1.31
HCG4-201ENST00000418983 NPHP3Q7Z494 1330 aa23.22■■□□□ 1.31
HCG4-201ENST00000418983 ACEP12821 1306 aa23.21■■□□□ 1.31
HCG4-201ENST00000418983 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
HCG4-201ENST00000418983 NHSL1Q5SYE7 1610 aa23.2■■□□□ 1.3
HCG4-201ENST00000418983 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms