RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 IFT172Q9UG01 1749 aa20.89■□□□□ 0.93
LINC01006-202ENST00000418309 AFF2P51816 1311 aa20.88■□□□□ 0.93
LINC01006-202ENST00000418309 ESCO1Q5FWF5 840 aa20.88■□□□□ 0.93
LINC01006-202ENST00000418309 C8orf37Q96NL8 207 aa20.88■□□□□ 0.93
LINC01006-202ENST00000418309 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
LINC01006-202ENST00000418309 RAB3GAP2Q9H2M9 1393 aa20.87■□□□□ 0.93
LINC01006-202ENST00000418309 RXRBP28702 533 aa20.87■□□□□ 0.93
LINC01006-202ENST00000418309 NUTM2FA1L443 756 aa20.86■□□□□ 0.93
LINC01006-202ENST00000418309 SOS2Q07890 1332 aaPredicted RBP20.85■□□□□ 0.93
LINC01006-202ENST00000418309 PIK3C2GO75747 1445 aa20.85■□□□□ 0.93
LINC01006-202ENST00000418309 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
LINC01006-202ENST00000418309 ADAMTS2O95450 1211 aa20.84■□□□□ 0.93
LINC01006-202ENST00000418309 CDC42BPGQ6DT37 1551 aa20.82■□□□□ 0.92
LINC01006-202ENST00000418309 TECPR2O15040 1411 aa20.82■□□□□ 0.92
LINC01006-202ENST00000418309 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
LINC01006-202ENST00000418309 C14orf93Q9H972 538 aaKnown RBP20.82■□□□□ 0.92
LINC01006-202ENST00000418309 PLEKHH1Q9ULM0 1364 aa20.82■□□□□ 0.92
LINC01006-202ENST00000418309 LAMC1P11047 1609 aa20.82■□□□□ 0.92
LINC01006-202ENST00000418309 NPHP3Q7Z494 1330 aa20.81■□□□□ 0.92
LINC01006-202ENST00000418309 YTHDC2Q9H6S0 1430 aaKnown RBP20.81■□□□□ 0.92
LINC01006-202ENST00000418309 FOXO3O43524 673 aa20.81■□□□□ 0.92
LINC01006-202ENST00000418309 CFAP70Q5T0N1 1121 aa20.81■□□□□ 0.92
LINC01006-202ENST00000418309 QTRT2Q9H974 415 aaKnown RBP20.81■□□□□ 0.92
LINC01006-202ENST00000418309 KNDC1Q76NI1 1749 aa20.79■□□□□ 0.92
LINC01006-202ENST00000418309 XPCQ01831 940 aaPredicted RBP20.79■□□□□ 0.92
LINC01006-202ENST00000418309 DHX57Q6P158 1386 aaKnown RBP20.79■□□□□ 0.92
LINC01006-202ENST00000418309 SIRT1Q96EB6 747 aa20.77■□□□□ 0.92
LINC01006-202ENST00000418309 MYOM2P54296 1465 aa20.75■□□□□ 0.91
LINC01006-202ENST00000418309 RBM6P78332 1123 aaKnown RBP20.75■□□□□ 0.91
LINC01006-202ENST00000418309 SAFB2Q14151 953 aaKnown RBP eCLIP20.75■□□□□ 0.91
LINC01006-202ENST00000418309 KDM2AQ9Y2K7 1162 aa20.75■□□□□ 0.91
LINC01006-202ENST00000418309 NRXN1Q9ULB1 1477 aa20.75■□□□□ 0.91
LINC01006-202ENST00000418309 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.91
LINC01006-202ENST00000418309 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
LINC01006-202ENST00000418309 POGKQ9P215 609 aa20.73■□□□□ 0.91
LINC01006-202ENST00000418309 USP21Q9UK80 565 aa20.73■□□□□ 0.91
LINC01006-202ENST00000418309 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
LINC01006-202ENST00000418309 PXDNQ92626 1479 aa20.72■□□□□ 0.91
LINC01006-202ENST00000418309 CDK12Q9NYV4 1490 aaPredicted RBP20.72■□□□□ 0.91
LINC01006-202ENST00000418309 FMN2Q9NZ56 1722 aa20.72■□□□□ 0.91
LINC01006-202ENST00000418309 HRCP23327 699 aa20.7■□□□□ 0.9
LINC01006-202ENST00000418309 COL22A1Q8NFW1 1626 aaPredicted RBP20.7■□□□□ 0.9
LINC01006-202ENST00000418309 KRT28Q7Z3Y7 464 aa20.69■□□□□ 0.9
LINC01006-202ENST00000418309 FNBP4Q8N3X1 1017 aaPredicted RBP20.68■□□□□ 0.9
LINC01006-202ENST00000418309 TRPC5Q9UL62 973 aaPredicted RBP20.68■□□□□ 0.9
LINC01006-202ENST00000418309 PHF8Q9UPP1 1060 aa20.68■□□□□ 0.9
LINC01006-202ENST00000418309 TRAK1Q9UPV9 953 aa20.68■□□□□ 0.9
LINC01006-202ENST00000418309 RGPD8O14715 1765 aaPredicted RBP20.67■□□□□ 0.9
LINC01006-202ENST00000418309 PSME1Q06323 249 aa20.66■□□□□ 0.9
LINC01006-202ENST00000418309 RGS12O14924 1447 aa20.66■□□□□ 0.9
LINC01006-202ENST00000418309 KIF1AQ12756 1690 aa20.66■□□□□ 0.9
LINC01006-202ENST00000418309 SPATA31A3Q5VYP0 1347 aa20.65■□□□□ 0.9
LINC01006-202ENST00000418309 STAC3Q96MF2 364 aa20.64■□□□□ 0.89
LINC01006-202ENST00000418309 DLC1Q96QB1 1528 aa20.63■□□□□ 0.89
LINC01006-202ENST00000418309 PLEKHG5O94827 1062 aa20.63■□□□□ 0.89
LINC01006-202ENST00000418309 HAP1P54257 671 aaPredicted RBP20.63■□□□□ 0.89
LINC01006-202ENST00000418309 LMOD2Q6P5Q4 547 aa20.63■□□□□ 0.89
LINC01006-202ENST00000418309 HIRIP3Q9BW71 556 aaPredicted RBP20.63■□□□□ 0.89
LINC01006-202ENST00000418309 PMFBP1Q8TBY8 1022 aa20.62■□□□□ 0.89
LINC01006-202ENST00000418309 MARF1Q9Y4F3 1742 aaKnown RBP20.61■□□□□ 0.89
LINC01006-202ENST00000418309 MINK1Q8N4C8 1332 aaPredicted RBP20.61■□□□□ 0.89
LINC01006-202ENST00000418309 ADGRB1O14514 1584 aa20.6■□□□□ 0.89
LINC01006-202ENST00000418309 ATRNO75882 1429 aa20.6■□□□□ 0.89
LINC01006-202ENST00000418309 BCL9LQ86UU0 1499 aa20.58■□□□□ 0.89
LINC01006-202ENST00000418309 TNS3Q68CZ2 1445 aa20.58■□□□□ 0.88
LINC01006-202ENST00000418309 ANKARQ7Z5J8 1434 aa20.57■□□□□ 0.88
LINC01006-202ENST00000418309 CABLES1Q8TDN4 633 aa20.57■□□□□ 0.88
LINC01006-202ENST00000418309 GJD4Q96KN9 370 aaPredicted RBP20.56■□□□□ 0.88
LINC01006-202ENST00000418309 SBNO1A3KN83 1393 aa20.56■□□□□ 0.88
LINC01006-202ENST00000418309 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
LINC01006-202ENST00000418309 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
LINC01006-202ENST00000418309 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
LINC01006-202ENST00000418309 USP32Q8NFA0 1604 aa20.54■□□□□ 0.88
LINC01006-202ENST00000418309 EIF3AQ14152 1382 aaKnown RBP20.54■□□□□ 0.88
LINC01006-202ENST00000418309 ADGRB2O60241 1585 aa20.54■□□□□ 0.88
LINC01006-202ENST00000418309 ARHGEF10O15013 1369 aa20.53■□□□□ 0.88
LINC01006-202ENST00000418309 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
LINC01006-202ENST00000418309 NGDNQ8NEJ9 315 aaKnown RBP20.51■□□□□ 0.87
LINC01006-202ENST00000418309 PRR36Q9H6K5 1346 aa20.51■□□□□ 0.87
LINC01006-202ENST00000418309 SLIT2O94813 1529 aa20.5■□□□□ 0.87
LINC01006-202ENST00000418309 TULP4Q9NRJ4 1543 aa20.49■□□□□ 0.87
LINC01006-202ENST00000418309 CCDC9Q9Y3X0 531 aaKnown RBP20.49■□□□□ 0.87
LINC01006-202ENST00000418309 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.48■□□□□ 0.87
LINC01006-202ENST00000418309 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
LINC01006-202ENST00000418309 ARHGEF28Q8N1W1 1705 aaKnown RBP20.47■□□□□ 0.87
LINC01006-202ENST00000418309 RALGAPBQ86X10 1494 aa20.46■□□□□ 0.87
LINC01006-202ENST00000418309 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
LINC01006-202ENST00000418309 FAM83GA6ND36 823 aa20.45■□□□□ 0.86
LINC01006-202ENST00000418309 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
LINC01006-202ENST00000418309 VPS72Q15906 364 aa20.44■□□□□ 0.86
LINC01006-202ENST00000418309 NBPF1Q3BBV0 1214 aa20.44■□□□□ 0.86
LINC01006-202ENST00000418309 ABCA3Q99758 1704 aa20.44■□□□□ 0.86
LINC01006-202ENST00000418309 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
LINC01006-202ENST00000418309 GLI3P10071 1580 aa20.43■□□□□ 0.86
LINC01006-202ENST00000418309 PLCH1Q4KWH8 1693 aa20.42■□□□□ 0.86
LINC01006-202ENST00000418309 CCDC125Q86Z20 511 aa20.41■□□□□ 0.86
LINC01006-202ENST00000418309 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
LINC01006-202ENST00000418309 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
LINC01006-202ENST00000418309 KIAA1210Q9ULL0 1709 aa20.41■□□□□ 0.86
LINC01006-202ENST00000418309 ITSN1Q15811 1721 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms