RNA–Protein interactions for RNA: ENST00000417930.1

LINC01871-201, Transcript of long intergenic non-protein coding RNA 1871, humanhuman

TSL 2 BASIC

Gene LINC01871, Length 243 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01871-201ENST00000417930 USP21Q9UK80 565 aa16.09■□□□□ 0.17
LINC01871-201ENST00000417930 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
LINC01871-201ENST00000417930 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.16
LINC01871-201ENST00000417930 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
LINC01871-201ENST00000417930 LAMC1P11047 1609 aa16.06■□□□□ 0.16
LINC01871-201ENST00000417930 ANKRD30BQ9BXX2 1392 aa16.06■□□□□ 0.16
LINC01871-201ENST00000417930 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
LINC01871-201ENST00000417930 TRPC5Q9UL62 973 aaPredicted RBP16.06■□□□□ 0.16
LINC01871-201ENST00000417930 FOXO3O43524 673 aa16.05■□□□□ 0.16
LINC01871-201ENST00000417930 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
LINC01871-201ENST00000417930 RGS12O14924 1447 aa16.04■□□□□ 0.16
LINC01871-201ENST00000417930 LRPPRCP42704 1394 aaKnown RBP16.04■□□□□ 0.16
LINC01871-201ENST00000417930 TMEM132EQ6IEE7 984 aa16.04■□□□□ 0.16
LINC01871-201ENST00000417930 XPCQ01831 940 aaPredicted RBP16.03■□□□□ 0.16
LINC01871-201ENST00000417930 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
LINC01871-201ENST00000417930 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.16
LINC01871-201ENST00000417930 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.15
LINC01871-201ENST00000417930 ABCC11Q96J66 1382 aa16.01■□□□□ 0.15
LINC01871-201ENST00000417930 ACIN1Q9UKV3 1341 aaKnown RBP16.01■□□□□ 0.15
LINC01871-201ENST00000417930 TECPR2O15040 1411 aa16■□□□□ 0.15
LINC01871-201ENST00000417930 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
LINC01871-201ENST00000417930 COL22A1Q8NFW1 1626 aaPredicted RBP15.99■□□□□ 0.15
LINC01871-201ENST00000417930 PLEKHH1Q9ULM0 1364 aa15.98■□□□□ 0.15
LINC01871-201ENST00000417930 PXDNQ92626 1479 aa15.97■□□□□ 0.15
LINC01871-201ENST00000417930 PIK3C2GO75747 1445 aa15.97■□□□□ 0.15
LINC01871-201ENST00000417930 YTHDC2Q9H6S0 1430 aaKnown RBP15.97■□□□□ 0.15
LINC01871-201ENST00000417930 MYOM2P54296 1465 aa15.97■□□□□ 0.15
LINC01871-201ENST00000417930 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
LINC01871-201ENST00000417930 ATRNO75882 1429 aa15.96■□□□□ 0.15
LINC01871-201ENST00000417930 KRT28Q7Z3Y7 464 aa15.96■□□□□ 0.15
LINC01871-201ENST00000417930 SIRT1Q96EB6 747 aa15.96■□□□□ 0.15
LINC01871-201ENST00000417930 C14orf93Q9H972 538 aaKnown RBP15.96■□□□□ 0.15
LINC01871-201ENST00000417930 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
LINC01871-201ENST00000417930 HAP1P54257 671 aaPredicted RBP15.95■□□□□ 0.14
LINC01871-201ENST00000417930 KNDC1Q76NI1 1749 aa15.94■□□□□ 0.14
LINC01871-201ENST00000417930 PSME1Q06323 249 aa15.94■□□□□ 0.14
LINC01871-201ENST00000417930 CFAP70Q5T0N1 1121 aa15.94■□□□□ 0.14
LINC01871-201ENST00000417930 GJD4Q96KN9 370 aaPredicted RBP15.94■□□□□ 0.14
LINC01871-201ENST00000417930 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
LINC01871-201ENST00000417930 BCL9LQ86UU0 1499 aa15.93■□□□□ 0.14
LINC01871-201ENST00000417930 PHF8Q9UPP1 1060 aa15.93■□□□□ 0.14
LINC01871-201ENST00000417930 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
LINC01871-201ENST00000417930 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
LINC01871-201ENST00000417930 SAFB2Q14151 953 aaKnown RBP eCLIP15.92■□□□□ 0.14
LINC01871-201ENST00000417930 POGKQ9P215 609 aa15.92■□□□□ 0.14
LINC01871-201ENST00000417930 MARF1Q9Y4F3 1742 aaKnown RBP15.91■□□□□ 0.14
LINC01871-201ENST00000417930 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
LINC01871-201ENST00000417930 CCDC125Q86Z20 511 aa15.91■□□□□ 0.14
LINC01871-201ENST00000417930 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
LINC01871-201ENST00000417930 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
LINC01871-201ENST00000417930 KIF1AQ12756 1690 aa15.91■□□□□ 0.14
LINC01871-201ENST00000417930 CABLES1Q8TDN4 633 aa15.88■□□□□ 0.13
LINC01871-201ENST00000417930 ZRANB1Q9UGI0 708 aa15.88■□□□□ 0.13
LINC01871-201ENST00000417930 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
LINC01871-201ENST00000417930 CCDC9Q9Y3X0 531 aaKnown RBP15.87■□□□□ 0.13
LINC01871-201ENST00000417930 TNS3Q68CZ2 1445 aa15.86■□□□□ 0.13
LINC01871-201ENST00000417930 RGPD8O14715 1765 aaPredicted RBP15.86■□□□□ 0.13
LINC01871-201ENST00000417930 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
LINC01871-201ENST00000417930 RAB3GAP2Q9H2M9 1393 aa15.86■□□□□ 0.13
LINC01871-201ENST00000417930 SLIT2O94813 1529 aa15.85■□□□□ 0.13
LINC01871-201ENST00000417930 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
LINC01871-201ENST00000417930 KDM2AQ9Y2K7 1162 aa15.85■□□□□ 0.13
LINC01871-201ENST00000417930 SBNO1A3KN83 1393 aa15.85■□□□□ 0.13
LINC01871-201ENST00000417930 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
LINC01871-201ENST00000417930 USP32Q8NFA0 1604 aa15.84■□□□□ 0.13
LINC01871-201ENST00000417930 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
LINC01871-201ENST00000417930 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
LINC01871-201ENST00000417930 VPS72Q15906 364 aa15.83■□□□□ 0.12
LINC01871-201ENST00000417930 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
LINC01871-201ENST00000417930 HIRIP3Q9BW71 556 aaPredicted RBP15.83■□□□□ 0.12
LINC01871-201ENST00000417930 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
LINC01871-201ENST00000417930 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
LINC01871-201ENST00000417930 MINK1Q8N4C8 1332 aaPredicted RBP15.82■□□□□ 0.12
LINC01871-201ENST00000417930 ANKARQ7Z5J8 1434 aa15.82■□□□□ 0.12
LINC01871-201ENST00000417930 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
LINC01871-201ENST00000417930 GLI3P10071 1580 aa15.81■□□□□ 0.12
LINC01871-201ENST00000417930 GPRASP1Q5JY77 1395 aa15.81■□□□□ 0.12
LINC01871-201ENST00000417930 EIF3AQ14152 1382 aaKnown RBP15.8■□□□□ 0.12
LINC01871-201ENST00000417930 A0A0G2JS52 829 aa15.8■□□□□ 0.12
LINC01871-201ENST00000417930 FAM83GA6ND36 823 aa15.8■□□□□ 0.12
LINC01871-201ENST00000417930 MYT1Q01538 1121 aa15.8■□□□□ 0.12
LINC01871-201ENST00000417930 STAC3Q96MF2 364 aa15.8■□□□□ 0.12
LINC01871-201ENST00000417930 BLMP54132 1417 aaPredicted RBP15.79■□□□□ 0.12
LINC01871-201ENST00000417930 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
LINC01871-201ENST00000417930 NGDNQ8NEJ9 315 aaKnown RBP15.78■□□□□ 0.12
LINC01871-201ENST00000417930 ONECUT3O60422 494 aaPredicted RBP15.77■□□□□ 0.12
LINC01871-201ENST00000417930 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
LINC01871-201ENST00000417930 KRT27Q7Z3Y8 459 aa15.77■□□□□ 0.12
LINC01871-201ENST00000417930 ADGRB1O14514 1584 aa15.77■□□□□ 0.11
LINC01871-201ENST00000417930 ADGRB2O60241 1585 aa15.76■□□□□ 0.11
LINC01871-201ENST00000417930 BTG4Q9NY30 223 aa15.76■□□□□ 0.11
LINC01871-201ENST00000417930 NWD2Q9ULI1 1742 aa15.76■□□□□ 0.11
LINC01871-201ENST00000417930 PLCH1Q4KWH8 1693 aa15.76■□□□□ 0.11
LINC01871-201ENST00000417930 DEFB132Q7Z7B7 95 aa15.75■□□□□ 0.11
LINC01871-201ENST00000417930 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
LINC01871-201ENST00000417930 BRWD3Q6RI45 1802 aa15.74■□□□□ 0.11
LINC01871-201ENST00000417930 ABCA3Q99758 1704 aa15.74■□□□□ 0.11
LINC01871-201ENST00000417930 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
LINC01871-201ENST00000417930 HRCP23327 699 aa15.73■□□□□ 0.11
LINC01871-201ENST00000417930 FAM98CQ17RN3 349 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms