RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 TRPM2O94759 1503 aa10.99□□□□□ -0.65
CASP4-202ENST00000417440 RXRBP28702 533 aa10.99□□□□□ -0.65
CASP4-202ENST00000417440 METP08581 1390 aa10.99□□□□□ -0.65
CASP4-202ENST00000417440 SETD1AO15047 1707 aaKnown RBP10.98□□□□□ -0.65
CASP4-202ENST00000417440 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
CASP4-202ENST00000417440 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
CASP4-202ENST00000417440 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
CASP4-202ENST00000417440 DIP2AQ14689 1571 aa10.98□□□□□ -0.65
CASP4-202ENST00000417440 AFF2P51816 1311 aa10.97□□□□□ -0.65
CASP4-202ENST00000417440 IQGAP3Q86VI3 1631 aa10.97□□□□□ -0.65
CASP4-202ENST00000417440 MIER1Q8N108 512 aa10.96□□□□□ -0.65
CASP4-202ENST00000417440 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
CASP4-202ENST00000417440 LRRC59Q96AG4 307 aaKnown RBP10.96□□□□□ -0.65
CASP4-202ENST00000417440 AHDC1Q5TGY3 1603 aaPredicted RBP10.95□□□□□ -0.66
CASP4-202ENST00000417440 ADAMTS2O95450 1211 aa10.95□□□□□ -0.66
CASP4-202ENST00000417440 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
CASP4-202ENST00000417440 MST1RQ04912 1400 aa10.94□□□□□ -0.66
CASP4-202ENST00000417440 QTRT2Q9H974 415 aaKnown RBP10.93□□□□□ -0.66
CASP4-202ENST00000417440 DCCP43146 1447 aa10.92□□□□□ -0.66
CASP4-202ENST00000417440 NGLY1Q96IV0 654 aa10.92□□□□□ -0.66
CASP4-202ENST00000417440 ORAI2Q96SN7 254 aa10.92□□□□□ -0.66
CASP4-202ENST00000417440 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
CASP4-202ENST00000417440 SETBP1Q9Y6X0 1596 aa10.91□□□□□ -0.66
CASP4-202ENST00000417440 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
CASP4-202ENST00000417440 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
CASP4-202ENST00000417440 SHPRHQ149N8 1683 aa10.91□□□□□ -0.66
CASP4-202ENST00000417440 NRXN3Q9Y4C0 1643 aa10.91□□□□□ -0.66
CASP4-202ENST00000417440 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.66
CASP4-202ENST00000417440 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
CASP4-202ENST00000417440 ADGRL3Q9HAR2 1447 aa10.9□□□□□ -0.66
CASP4-202ENST00000417440 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
CASP4-202ENST00000417440 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
CASP4-202ENST00000417440 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
CASP4-202ENST00000417440 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
CASP4-202ENST00000417440 SPOCK2Q92563 424 aa10.89□□□□□ -0.67
CASP4-202ENST00000417440 SPHKAPQ2M3C7 1700 aa10.89□□□□□ -0.67
CASP4-202ENST00000417440 ROBO2Q9HCK4 1378 aa10.89□□□□□ -0.67
CASP4-202ENST00000417440 CLTCL1P53675 1640 aa10.88□□□□□ -0.67
CASP4-202ENST00000417440 USP21Q9UK80 565 aa10.88□□□□□ -0.67
CASP4-202ENST00000417440 NEXMIFQ5QGS0 1516 aa10.88□□□□□ -0.67
CASP4-202ENST00000417440 NAIPQ13075 1403 aa10.87□□□□□ -0.67
CASP4-202ENST00000417440 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
CASP4-202ENST00000417440 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
CASP4-202ENST00000417440 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
CASP4-202ENST00000417440 XPCQ01831 940 aaPredicted RBP10.87□□□□□ -0.67
CASP4-202ENST00000417440 ESCO1Q5FWF5 840 aa10.87□□□□□ -0.67
CASP4-202ENST00000417440 STK26Q9P289 416 aa10.87□□□□□ -0.67
CASP4-202ENST00000417440 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
CASP4-202ENST00000417440 RGS12O14924 1447 aa10.86□□□□□ -0.67
CASP4-202ENST00000417440 RGL3Q3MIN7 710 aa10.86□□□□□ -0.67
CASP4-202ENST00000417440 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
CASP4-202ENST00000417440 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
CASP4-202ENST00000417440 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
CASP4-202ENST00000417440 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
CASP4-202ENST00000417440 FOXO3O43524 673 aa10.84□□□□□ -0.67
CASP4-202ENST00000417440 WAPLQ7Z5K2 1190 aa10.84□□□□□ -0.67
CASP4-202ENST00000417440 TRPC5Q9UL62 973 aaPredicted RBP10.84□□□□□ -0.67
CASP4-202ENST00000417440 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
CASP4-202ENST00000417440 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
CASP4-202ENST00000417440 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
CASP4-202ENST00000417440 ADGRF5Q8IZF2 1346 aa10.83□□□□□ -0.68
CASP4-202ENST00000417440 TMEM132EQ6IEE7 984 aa10.82□□□□□ -0.68
CASP4-202ENST00000417440 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
CASP4-202ENST00000417440 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
CASP4-202ENST00000417440 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
CASP4-202ENST00000417440 KIF1BO60333 1816 aa10.81□□□□□ -0.68
CASP4-202ENST00000417440 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
CASP4-202ENST00000417440 ATAD2Q6PL18 1390 aa10.8□□□□□ -0.68
CASP4-202ENST00000417440 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
CASP4-202ENST00000417440 MPHOSPH9Q99550 1183 aa10.78□□□□□ -0.68
CASP4-202ENST00000417440 PLEKHH1Q9ULM0 1364 aa10.77□□□□□ -0.68
CASP4-202ENST00000417440 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
CASP4-202ENST00000417440 GJD4Q96KN9 370 aaPredicted RBP10.77□□□□□ -0.69
CASP4-202ENST00000417440 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
CASP4-202ENST00000417440 ATRNO75882 1429 aa10.76□□□□□ -0.69
CASP4-202ENST00000417440 SAFB2Q14151 953 aaKnown RBP eCLIP10.76□□□□□ -0.69
CASP4-202ENST00000417440 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
CASP4-202ENST00000417440 KRT28Q7Z3Y7 464 aa10.76□□□□□ -0.69
CASP4-202ENST00000417440 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
CASP4-202ENST00000417440 MYOM2P54296 1465 aa10.75□□□□□ -0.69
CASP4-202ENST00000417440 ANKRD30BQ9BXX2 1392 aa10.75□□□□□ -0.69
CASP4-202ENST00000417440 PRAG1Q86YV5 1406 aa10.75□□□□□ -0.69
CASP4-202ENST00000417440 BCL9LQ86UU0 1499 aa10.74□□□□□ -0.69
CASP4-202ENST00000417440 PXDNQ92626 1479 aa10.74□□□□□ -0.69
CASP4-202ENST00000417440 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
CASP4-202ENST00000417440 CABLES1Q8TDN4 633 aa10.74□□□□□ -0.69
CASP4-202ENST00000417440 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
CASP4-202ENST00000417440 LAMC1P11047 1609 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 PPLO60437 1756 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 CFAP70Q5T0N1 1121 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 UNC5CLQ8IV45 518 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 SPATA31A3Q5VYP0 1347 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 ABCC11Q96J66 1382 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 CDC42BPGQ6DT37 1551 aa10.73□□□□□ -0.69
CASP4-202ENST00000417440 PSME1Q06323 249 aa10.72□□□□□ -0.69
CASP4-202ENST00000417440 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
CASP4-202ENST00000417440 SPATA31E1Q6ZUB1 1445 aa10.72□□□□□ -0.69
CASP4-202ENST00000417440 A0A0G2JS52 829 aa10.71□□□□□ -0.69
CASP4-202ENST00000417440 MYT1Q01538 1121 aa10.71□□□□□ -0.69
CASP4-202ENST00000417440 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms