RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 CNKSR2Q8WXI2 1034 aa9.57□□□□□ -0.88
VNN3-205ENST00000417437 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
VNN3-205ENST00000417437 NHSL1Q5SYE7 1610 aa9.56□□□□□ -0.88
VNN3-205ENST00000417437 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
VNN3-205ENST00000417437 PNPLA6Q8IY17 1366 aa9.55□□□□□ -0.88
VNN3-205ENST00000417437 MST1RQ04912 1400 aa9.55□□□□□ -0.88
VNN3-205ENST00000417437 E9PCH4 1651 aa9.55□□□□□ -0.88
VNN3-205ENST00000417437 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
VNN3-205ENST00000417437 SIN3AQ96ST3 1273 aa9.54□□□□□ -0.88
VNN3-205ENST00000417437 PTPRUQ92729 1446 aa9.54□□□□□ -0.88
VNN3-205ENST00000417437 UNC13BO14795 1591 aa9.54□□□□□ -0.88
VNN3-205ENST00000417437 ADGRL2O95490 1459 aa9.53□□□□□ -0.88
VNN3-205ENST00000417437 SF3B2Q13435 895 aaKnown RBP9.53□□□□□ -0.88
VNN3-205ENST00000417437 DDX10Q13206 875 aaKnown RBP9.52□□□□□ -0.89
VNN3-205ENST00000417437 NUP155O75694 1391 aa9.51□□□□□ -0.89
VNN3-205ENST00000417437 XRN1Q8IZH2 1706 aaKnown RBP9.51□□□□□ -0.89
VNN3-205ENST00000417437 ADGRL3Q9HAR2 1447 aa9.51□□□□□ -0.89
VNN3-205ENST00000417437 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
VNN3-205ENST00000417437 CCER2I3L3R5 266 aa9.5□□□□□ -0.89
VNN3-205ENST00000417437 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
VNN3-205ENST00000417437 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
VNN3-205ENST00000417437 ANP32CO43423 234 aa9.49□□□□□ -0.89
VNN3-205ENST00000417437 KCNA4P22459 653 aa9.49□□□□□ -0.89
VNN3-205ENST00000417437 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
VNN3-205ENST00000417437 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
VNN3-205ENST00000417437 METP08581 1390 aa9.49□□□□□ -0.89
VNN3-205ENST00000417437 IQGAP3Q86VI3 1631 aa9.49□□□□□ -0.89
VNN3-205ENST00000417437 C1orf167Q5SNV9 1468 aa9.48□□□□□ -0.89
VNN3-205ENST00000417437 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
VNN3-205ENST00000417437 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
VNN3-205ENST00000417437 TONSLQ96HA7 1378 aa9.48□□□□□ -0.89
VNN3-205ENST00000417437 SPHKAPQ2M3C7 1700 aa9.48□□□□□ -0.89
VNN3-205ENST00000417437 NRXN3Q9Y4C0 1643 aa9.47□□□□□ -0.89
VNN3-205ENST00000417437 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
VNN3-205ENST00000417437 CCDC9Q9Y3X0 531 aaKnown RBP9.47□□□□□ -0.89
VNN3-205ENST00000417437 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
VNN3-205ENST00000417437 KIF1BO60333 1816 aa9.47□□□□□ -0.89
VNN3-205ENST00000417437 ATRNO75882 1429 aa9.47□□□□□ -0.89
VNN3-205ENST00000417437 MARF1Q9Y4F3 1742 aaKnown RBP9.46□□□□□ -0.89
VNN3-205ENST00000417437 A0A0G2JS52 829 aa9.46□□□□□ -0.9
VNN3-205ENST00000417437 NEFLP07196 543 aa9.46□□□□□ -0.9
VNN3-205ENST00000417437 NPHP3Q7Z494 1330 aa9.46□□□□□ -0.9
VNN3-205ENST00000417437 VGFO15240 615 aaPredicted RBP9.45□□□□□ -0.9
VNN3-205ENST00000417437 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
VNN3-205ENST00000417437 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
VNN3-205ENST00000417437 HFM1A2PYH4 1435 aa9.45□□□□□ -0.9
VNN3-205ENST00000417437 BLMP54132 1417 aaPredicted RBP9.45□□□□□ -0.9
VNN3-205ENST00000417437 FOXO3O43524 673 aa9.44□□□□□ -0.9
VNN3-205ENST00000417437 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
VNN3-205ENST00000417437 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
VNN3-205ENST00000417437 COL22A1Q8NFW1 1626 aaPredicted RBP9.43□□□□□ -0.9
VNN3-205ENST00000417437 NUTM2FA1L443 756 aa9.43□□□□□ -0.9
VNN3-205ENST00000417437 UNC5CLQ8IV45 518 aa9.43□□□□□ -0.9
VNN3-205ENST00000417437 LAMC1P11047 1609 aa9.42□□□□□ -0.9
VNN3-205ENST00000417437 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
VNN3-205ENST00000417437 PSDA5PKW4 1024 aaPredicted RBP9.42□□□□□ -0.9
VNN3-205ENST00000417437 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
VNN3-205ENST00000417437 BRWD3Q6RI45 1802 aa9.42□□□□□ -0.9
VNN3-205ENST00000417437 BCL9LQ86UU0 1499 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 SRCAPQ6ZRS2 3230 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 ROBO2Q9HCK4 1378 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 BAG6P46379 1132 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 FKBP8Q14318 412 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 LMOD2Q6P5Q4 547 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 SEPT12Q8IYM1 358 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 NEXMIFQ5QGS0 1516 aa9.41□□□□□ -0.9
VNN3-205ENST00000417437 NAIPQ13075 1403 aa9.4□□□□□ -0.9
VNN3-205ENST00000417437 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
VNN3-205ENST00000417437 STK26Q9P289 416 aa9.4□□□□□ -0.9
VNN3-205ENST00000417437 MYOM2P54296 1465 aa9.4□□□□□ -0.91
VNN3-205ENST00000417437 RALGAPBQ86X10 1494 aa9.4□□□□□ -0.91
VNN3-205ENST00000417437 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
VNN3-205ENST00000417437 CLTCL1P53675 1640 aa9.39□□□□□ -0.91
VNN3-205ENST00000417437 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
VNN3-205ENST00000417437 LRP5O75197 1615 aa9.38□□□□□ -0.91
VNN3-205ENST00000417437 PXDNQ92626 1479 aa9.37□□□□□ -0.91
VNN3-205ENST00000417437 PSME1Q06323 249 aa9.37□□□□□ -0.91
VNN3-205ENST00000417437 KRT28Q7Z3Y7 464 aa9.37□□□□□ -0.91
VNN3-205ENST00000417437 GLI3P10071 1580 aa9.37□□□□□ -0.91
VNN3-205ENST00000417437 RPGRIP1LQ68CZ1 1315 aa9.36□□□□□ -0.91
VNN3-205ENST00000417437 EP400Q96L91 3159 aa9.36□□□□□ -0.91
VNN3-205ENST00000417437 VPS72Q15906 364 aa9.36□□□□□ -0.91
VNN3-205ENST00000417437 CDC42BPGQ6DT37 1551 aa9.36□□□□□ -0.91
VNN3-205ENST00000417437 SPATA31A3Q5VYP0 1347 aa9.35□□□□□ -0.91
VNN3-205ENST00000417437 WAPLQ7Z5K2 1190 aa9.35□□□□□ -0.91
VNN3-205ENST00000417437 CABLES1Q8TDN4 633 aa9.35□□□□□ -0.91
VNN3-205ENST00000417437 SLIT2O94813 1529 aa9.35□□□□□ -0.91
VNN3-205ENST00000417437 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
VNN3-205ENST00000417437 CCDC144AA2RUR9 1427 aa9.34□□□□□ -0.91
VNN3-205ENST00000417437 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
VNN3-205ENST00000417437 R3HDM1Q15032 1099 aaKnown RBP9.34□□□□□ -0.91
VNN3-205ENST00000417437 PPLO60437 1756 aa9.34□□□□□ -0.91
VNN3-205ENST00000417437 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
VNN3-205ENST00000417437 PLCH1Q4KWH8 1693 aa9.33□□□□□ -0.92
VNN3-205ENST00000417437 YY1P25490 414 aa9.33□□□□□ -0.92
VNN3-205ENST00000417437 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
VNN3-205ENST00000417437 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
VNN3-205ENST00000417437 NWD2Q9ULI1 1742 aa9.33□□□□□ -0.92
VNN3-205ENST00000417437 RGPD8O14715 1765 aaPredicted RBP9.32□□□□□ -0.92
VNN3-205ENST00000417437 RGPD1P0DJD0 1748 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms