RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 KIF1BO60333 1816 aa13.69□□□□□ -0.22
SMIM12-201ENST00000417239 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
SMIM12-201ENST00000417239 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
SMIM12-201ENST00000417239 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
SMIM12-201ENST00000417239 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
SMIM12-201ENST00000417239 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
SMIM12-201ENST00000417239 SLIT2O94813 1529 aa13.67□□□□□ -0.22
SMIM12-201ENST00000417239 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
SMIM12-201ENST00000417239 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
SMIM12-201ENST00000417239 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
SMIM12-201ENST00000417239 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
SMIM12-201ENST00000417239 RGPD1P0DJD0 1748 aa13.64□□□□□ -0.23
SMIM12-201ENST00000417239 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
SMIM12-201ENST00000417239 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
SMIM12-201ENST00000417239 PPLO60437 1756 aa13.61□□□□□ -0.23
SMIM12-201ENST00000417239 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
SMIM12-201ENST00000417239 NUP155O75694 1391 aa13.6□□□□□ -0.23
SMIM12-201ENST00000417239 HFM1A2PYH4 1435 aa13.6□□□□□ -0.23
SMIM12-201ENST00000417239 HRCP23327 699 aa13.6□□□□□ -0.23
SMIM12-201ENST00000417239 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
SMIM12-201ENST00000417239 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
SMIM12-201ENST00000417239 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
SMIM12-201ENST00000417239 UNC5CLQ8IV45 518 aa13.6□□□□□ -0.23
SMIM12-201ENST00000417239 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
SMIM12-201ENST00000417239 NRAPQ86VF7 1730 aa13.59□□□□□ -0.23
SMIM12-201ENST00000417239 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
SMIM12-201ENST00000417239 PSDA5PKW4 1024 aaPredicted RBP13.59□□□□□ -0.23
SMIM12-201ENST00000417239 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
SMIM12-201ENST00000417239 APLP2Q06481 763 aa13.58□□□□□ -0.24
SMIM12-201ENST00000417239 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
SMIM12-201ENST00000417239 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
SMIM12-201ENST00000417239 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
SMIM12-201ENST00000417239 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
SMIM12-201ENST00000417239 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
SMIM12-201ENST00000417239 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
SMIM12-201ENST00000417239 FOXO3O43524 673 aa13.55□□□□□ -0.24
SMIM12-201ENST00000417239 ONECUT3O60422 494 aaPredicted RBP13.54□□□□□ -0.24
SMIM12-201ENST00000417239 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
SMIM12-201ENST00000417239 VPS72Q15906 364 aa13.53□□□□□ -0.24
SMIM12-201ENST00000417239 KRT27Q7Z3Y8 459 aa13.53□□□□□ -0.24
SMIM12-201ENST00000417239 NAIPQ13075 1403 aa13.53□□□□□ -0.24
SMIM12-201ENST00000417239 BAG6P46379 1132 aa13.52□□□□□ -0.25
SMIM12-201ENST00000417239 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
SMIM12-201ENST00000417239 RREB1Q92766 1687 aa13.52□□□□□ -0.25
SMIM12-201ENST00000417239 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
SMIM12-201ENST00000417239 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
SMIM12-201ENST00000417239 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
SMIM12-201ENST00000417239 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
SMIM12-201ENST00000417239 ADGRB2O60241 1585 aa13.49□□□□□ -0.25
SMIM12-201ENST00000417239 TECPR2O15040 1411 aa13.49□□□□□ -0.25
SMIM12-201ENST00000417239 TNS3Q68CZ2 1445 aa13.49□□□□□ -0.25
SMIM12-201ENST00000417239 COL14A1Q05707 1796 aaKnown RBP13.48□□□□□ -0.25
SMIM12-201ENST00000417239 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
SMIM12-201ENST00000417239 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
SMIM12-201ENST00000417239 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
SMIM12-201ENST00000417239 YY1P25490 414 aa13.47□□□□□ -0.25
SMIM12-201ENST00000417239 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
SMIM12-201ENST00000417239 NUTM2FA1L443 756 aa13.46□□□□□ -0.25
SMIM12-201ENST00000417239 TRPM3Q9HCF6 1732 aaPredicted RBP13.46□□□□□ -0.25
SMIM12-201ENST00000417239 ALS2Q96Q42 1657 aa13.45□□□□□ -0.26
SMIM12-201ENST00000417239 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
SMIM12-201ENST00000417239 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
SMIM12-201ENST00000417239 CABLES1Q8TDN4 633 aa13.44□□□□□ -0.26
SMIM12-201ENST00000417239 HAP1P54257 671 aaPredicted RBP13.43□□□□□ -0.26
SMIM12-201ENST00000417239 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
SMIM12-201ENST00000417239 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
SMIM12-201ENST00000417239 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
SMIM12-201ENST00000417239 A0A0G2JS52 829 aa13.42□□□□□ -0.26
SMIM12-201ENST00000417239 MYT1Q01538 1121 aa13.42□□□□□ -0.26
SMIM12-201ENST00000417239 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
SMIM12-201ENST00000417239 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
SMIM12-201ENST00000417239 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
SMIM12-201ENST00000417239 UTRNP46939 3433 aa13.41□□□□□ -0.26
SMIM12-201ENST00000417239 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
SMIM12-201ENST00000417239 EZH2Q15910 746 aaKnown RBP13.41□□□□□ -0.26
SMIM12-201ENST00000417239 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
SMIM12-201ENST00000417239 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
SMIM12-201ENST00000417239 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
SMIM12-201ENST00000417239 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
SMIM12-201ENST00000417239 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
SMIM12-201ENST00000417239 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
SMIM12-201ENST00000417239 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
SMIM12-201ENST00000417239 CAMKK2Q96RR4 588 aa13.38□□□□□ -0.27
SMIM12-201ENST00000417239 ITGAEP38570 1179 aa13.37□□□□□ -0.27
SMIM12-201ENST00000417239 PSME1Q06323 249 aa13.37□□□□□ -0.27
SMIM12-201ENST00000417239 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
SMIM12-201ENST00000417239 STK26Q9P289 416 aa13.37□□□□□ -0.27
SMIM12-201ENST00000417239 PHRF1Q9P1Y6 1649 aaKnown RBP13.36□□□□□ -0.27
SMIM12-201ENST00000417239 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
SMIM12-201ENST00000417239 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
SMIM12-201ENST00000417239 PHF8Q9UPP1 1060 aa13.36□□□□□ -0.27
SMIM12-201ENST00000417239 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
SMIM12-201ENST00000417239 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
SMIM12-201ENST00000417239 ADGRF5Q8IZF2 1346 aa13.36□□□□□ -0.27
SMIM12-201ENST00000417239 CASZ1Q86V15 1759 aa13.35□□□□□ -0.27
SMIM12-201ENST00000417239 NINLQ9Y2I6 1382 aa13.35□□□□□ -0.27
SMIM12-201ENST00000417239 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
SMIM12-201ENST00000417239 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
SMIM12-201ENST00000417239 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
SMIM12-201ENST00000417239 CHD4Q14839 1912 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms