RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 SOS2Q07890 1332 aaPredicted RBP32.29■■■□□ 2.76
ACTB-203ENST00000417101 TECPR2O15040 1411 aa32.29■■■□□ 2.76
ACTB-203ENST00000417101 LAMC1P11047 1609 aa32.29■■■□□ 2.76
ACTB-203ENST00000417101 RAB3GAP2Q9H2M9 1393 aa32.28■■■□□ 2.76
ACTB-203ENST00000417101 RXRBP28702 533 aa32.27■■■□□ 2.76
ACTB-203ENST00000417101 C8orf37Q96NL8 207 aa32.27■■■□□ 2.76
ACTB-203ENST00000417101 ABCC11Q96J66 1382 aa32.27■■■□□ 2.76
ACTB-203ENST00000417101 CDC42BPGQ6DT37 1551 aa32.27■■■□□ 2.76
ACTB-203ENST00000417101 ESCO1Q5FWF5 840 aa32.26■■■□□ 2.75
ACTB-203ENST00000417101 PLEKHH1Q9ULM0 1364 aa32.23■■■□□ 2.75
ACTB-203ENST00000417101 ADAMTS2O95450 1211 aa32.23■■■□□ 2.75
ACTB-203ENST00000417101 YTHDC2Q9H6S0 1430 aaKnown RBP32.22■■■□□ 2.75
ACTB-203ENST00000417101 NUTM2FA1L443 756 aa32.21■■■□□ 2.75
ACTB-203ENST00000417101 C14orf93Q9H972 538 aaKnown RBP32.2■■■□□ 2.75
ACTB-203ENST00000417101 NPHP3Q7Z494 1330 aa32.2■■■□□ 2.74
ACTB-203ENST00000417101 KNDC1Q76NI1 1749 aa32.18■■■□□ 2.74
ACTB-203ENST00000417101 NGLY1Q96IV0 654 aa32.18■■■□□ 2.74
ACTB-203ENST00000417101 CFAP70Q5T0N1 1121 aa32.17■■■□□ 2.74
ACTB-203ENST00000417101 NRXN1Q9ULB1 1477 aa32.16■■■□□ 2.74
ACTB-203ENST00000417101 FOXO3O43524 673 aa32.16■■■□□ 2.74
ACTB-203ENST00000417101 QTRT2Q9H974 415 aaKnown RBP32.16■■■□□ 2.74
ACTB-203ENST00000417101 MYOM2P54296 1465 aa32.15■■■□□ 2.74
ACTB-203ENST00000417101 XPCQ01831 940 aaPredicted RBP32.14■■■□□ 2.74
ACTB-203ENST00000417101 CDK12Q9NYV4 1490 aaPredicted RBP32.14■■■□□ 2.74
ACTB-203ENST00000417101 SIRT1Q96EB6 747 aa32.13■■■□□ 2.73
ACTB-203ENST00000417101 PXDNQ92626 1479 aa32.12■■■□□ 2.73
ACTB-203ENST00000417101 DHX57Q6P158 1386 aaKnown RBP32.12■■■□□ 2.73
ACTB-203ENST00000417101 RBM6P78332 1123 aaKnown RBP32.1■■■□□ 2.73
ACTB-203ENST00000417101 UPF1Q92900 1129 aaKnown RBP eCLIP32.1■■■□□ 2.73
ACTB-203ENST00000417101 COL22A1Q8NFW1 1626 aaPredicted RBP32.08■■■□□ 2.73
ACTB-203ENST00000417101 FMN2Q9NZ56 1722 aa32.06■■■□□ 2.72
ACTB-203ENST00000417101 USP21Q9UK80 565 aa32.06■■■□□ 2.72
ACTB-203ENST00000417101 SAFB2Q14151 953 aaKnown RBP eCLIP32.05■■■□□ 2.72
ACTB-203ENST00000417101 PRAM1Q96QH2 718 aa32.04■■■□□ 2.72
ACTB-203ENST00000417101 RGS12O14924 1447 aa32.03■■■□□ 2.72
ACTB-203ENST00000417101 FNBP4Q8N3X1 1017 aaPredicted RBP32.03■■■□□ 2.72
ACTB-203ENST00000417101 KDM2AQ9Y2K7 1162 aa32■■■□□ 2.71
ACTB-203ENST00000417101 HRCP23327 699 aa31.99■■■□□ 2.71
ACTB-203ENST00000417101 POGKQ9P215 609 aa31.99■■■□□ 2.71
ACTB-203ENST00000417101 TRPC5Q9UL62 973 aaPredicted RBP31.99■■■□□ 2.71
ACTB-203ENST00000417101 KRT28Q7Z3Y7 464 aa31.98■■■□□ 2.71
ACTB-203ENST00000417101 DCAF11Q8TEB1 546 aa31.98■■■□□ 2.71
ACTB-203ENST00000417101 KIF1AQ12756 1690 aa31.98■■■□□ 2.71
ACTB-203ENST00000417101 SPATA31A3Q5VYP0 1347 aa31.98■■■□□ 2.71
ACTB-203ENST00000417101 PHF8Q9UPP1 1060 aa31.97■■■□□ 2.71
ACTB-203ENST00000417101 DLC1Q96QB1 1528 aa31.95■■■□□ 2.71
ACTB-203ENST00000417101 ADGRB1O14514 1584 aa31.94■■■□□ 2.7
ACTB-203ENST00000417101 TRAK1Q9UPV9 953 aa31.94■■■□□ 2.7
ACTB-203ENST00000417101 ATRNO75882 1429 aa31.92■■■□□ 2.7
ACTB-203ENST00000417101 RGPD8O14715 1765 aaPredicted RBP31.91■■■□□ 2.7
ACTB-203ENST00000417101 BCL9LQ86UU0 1499 aa31.9■■■□□ 2.7
ACTB-203ENST00000417101 PSME1Q06323 249 aa31.89■■■□□ 2.7
ACTB-203ENST00000417101 STAC3Q96MF2 364 aa31.88■■■□□ 2.69
ACTB-203ENST00000417101 HIRIP3Q9BW71 556 aaPredicted RBP31.88■■■□□ 2.69
ACTB-203ENST00000417101 MARF1Q9Y4F3 1742 aaKnown RBP31.86■■■□□ 2.69
ACTB-203ENST00000417101 TNS3Q68CZ2 1445 aa31.86■■■□□ 2.69
ACTB-203ENST00000417101 PMFBP1Q8TBY8 1022 aa31.86■■■□□ 2.69
ACTB-203ENST00000417101 ANKARQ7Z5J8 1434 aa31.85■■■□□ 2.69
ACTB-203ENST00000417101 MINK1Q8N4C8 1332 aaPredicted RBP31.85■■■□□ 2.69
ACTB-203ENST00000417101 ADGRB2O60241 1585 aa31.84■■■□□ 2.69
ACTB-203ENST00000417101 PLEKHG5O94827 1062 aa31.83■■■□□ 2.69
ACTB-203ENST00000417101 HAP1P54257 671 aaPredicted RBP31.82■■■□□ 2.68
ACTB-203ENST00000417101 LMOD2Q6P5Q4 547 aa31.82■■■□□ 2.68
ACTB-203ENST00000417101 CABLES1Q8TDN4 633 aa31.82■■■□□ 2.68
ACTB-203ENST00000417101 USP32Q8NFA0 1604 aa31.82■■■□□ 2.68
ACTB-203ENST00000417101 SBNO1A3KN83 1393 aa31.81■■■□□ 2.68
ACTB-203ENST00000417101 ATAD2Q6PL18 1390 aa31.81■■■□□ 2.68
ACTB-203ENST00000417101 GJD4Q96KN9 370 aaPredicted RBP31.8■■■□□ 2.68
ACTB-203ENST00000417101 UNC5CLQ8IV45 518 aa31.79■■■□□ 2.68
ACTB-203ENST00000417101 SLIT2O94813 1529 aa31.78■■■□□ 2.68
ACTB-203ENST00000417101 ARHGEF10O15013 1369 aa31.77■■■□□ 2.68
ACTB-203ENST00000417101 EIF3AQ14152 1382 aaKnown RBP31.77■■■□□ 2.68
ACTB-203ENST00000417101 PRR36Q9H6K5 1346 aa31.76■■■□□ 2.68
ACTB-203ENST00000417101 WASLO00401 505 aaPredicted RBP31.76■■■□□ 2.67
ACTB-203ENST00000417101 TULP4Q9NRJ4 1543 aa31.73■■■□□ 2.67
ACTB-203ENST00000417101 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.72■■■□□ 2.67
ACTB-203ENST00000417101 EP400Q96L91 3159 aa31.72■■■□□ 2.67
ACTB-203ENST00000417101 GPRASP1Q5JY77 1395 aa31.71■■■□□ 2.67
ACTB-203ENST00000417101 RALGAPBQ86X10 1494 aa31.71■■■□□ 2.67
ACTB-203ENST00000417101 ARHGEF28Q8N1W1 1705 aaKnown RBP31.67■■■□□ 2.66
ACTB-203ENST00000417101 NGDNQ8NEJ9 315 aaKnown RBP31.67■■■□□ 2.66
ACTB-203ENST00000417101 GLI3P10071 1580 aa31.67■■■□□ 2.66
ACTB-203ENST00000417101 ABCA3Q99758 1704 aa31.66■■■□□ 2.66
ACTB-203ENST00000417101 TRPM3Q9HCF6 1732 aaPredicted RBP31.65■■■□□ 2.66
ACTB-203ENST00000417101 VPS72Q15906 364 aa31.64■■■□□ 2.66
ACTB-203ENST00000417101 FAM83GA6ND36 823 aa31.63■■■□□ 2.65
ACTB-203ENST00000417101 NUDT16Q96DE0 195 aaKnown RBP31.63■■■□□ 2.65
ACTB-203ENST00000417101 CCDC9Q9Y3X0 531 aaKnown RBP31.62■■■□□ 2.65
ACTB-203ENST00000417101 PLCH1Q4KWH8 1693 aa31.61■■■□□ 2.65
ACTB-203ENST00000417101 PAK3O75914 559 aaPredicted RBP31.61■■■□□ 2.65
ACTB-203ENST00000417101 ATP7BP35670 1465 aa31.6■■■□□ 2.65
ACTB-203ENST00000417101 ALS2Q96Q42 1657 aa31.6■■■□□ 2.65
ACTB-203ENST00000417101 NWD2Q9ULI1 1742 aa31.59■■■□□ 2.65
ACTB-203ENST00000417101 NBPF1Q3BBV0 1214 aa31.59■■■□□ 2.65
ACTB-203ENST00000417101 CDK19Q9BWU1 502 aa31.59■■■□□ 2.65
ACTB-203ENST00000417101 SEPT12Q8IYM1 358 aa31.57■■■□□ 2.64
ACTB-203ENST00000417101 KIAA1210Q9ULL0 1709 aa31.57■■■□□ 2.64
ACTB-203ENST00000417101 CCDC125Q86Z20 511 aa31.56■■■□□ 2.64
ACTB-203ENST00000417101 BTG4Q9NY30 223 aa31.54■■■□□ 2.64
ACTB-203ENST00000417101 ITSN1Q15811 1721 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms