RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
RHBDF1-202ENST00000417043 ADAMTS2O95450 1211 aa23.16■■□□□ 1.3
RHBDF1-202ENST00000417043 ESCO1Q5FWF5 840 aa23.16■■□□□ 1.3
RHBDF1-202ENST00000417043 LAMC1P11047 1609 aa23.15■■□□□ 1.3
RHBDF1-202ENST00000417043 PLEKHH1Q9ULM0 1364 aa23.15■■□□□ 1.3
RHBDF1-202ENST00000417043 PIK3C2GO75747 1445 aa23.14■■□□□ 1.29
RHBDF1-202ENST00000417043 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
RHBDF1-202ENST00000417043 XPCQ01831 940 aaPredicted RBP23.12■■□□□ 1.29
RHBDF1-202ENST00000417043 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
RHBDF1-202ENST00000417043 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
RHBDF1-202ENST00000417043 TECPR2O15040 1411 aa23.11■■□□□ 1.29
RHBDF1-202ENST00000417043 NGLY1Q96IV0 654 aa23.11■■□□□ 1.29
RHBDF1-202ENST00000417043 QTRT2Q9H974 415 aaKnown RBP23.11■■□□□ 1.29
RHBDF1-202ENST00000417043 CDC42BPGQ6DT37 1551 aa23.1■■□□□ 1.29
RHBDF1-202ENST00000417043 FOXO3O43524 673 aa23.1■■□□□ 1.29
RHBDF1-202ENST00000417043 CFAP70Q5T0N1 1121 aa23.09■■□□□ 1.29
RHBDF1-202ENST00000417043 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
RHBDF1-202ENST00000417043 YTHDC2Q9H6S0 1430 aaKnown RBP23.08■■□□□ 1.29
RHBDF1-202ENST00000417043 C14orf93Q9H972 538 aaKnown RBP23.08■■□□□ 1.29
RHBDF1-202ENST00000417043 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.28
RHBDF1-202ENST00000417043 NPHP3Q7Z494 1330 aa23.07■■□□□ 1.28
RHBDF1-202ENST00000417043 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
RHBDF1-202ENST00000417043 PXDNQ92626 1479 aa23.05■■□□□ 1.28
RHBDF1-202ENST00000417043 RBM6P78332 1123 aaKnown RBP23.03■■□□□ 1.28
RHBDF1-202ENST00000417043 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
RHBDF1-202ENST00000417043 SAFB2Q14151 953 aaKnown RBP eCLIP23.02■■□□□ 1.28
RHBDF1-202ENST00000417043 CDK12Q9NYV4 1490 aaPredicted RBP23.02■■□□□ 1.28
RHBDF1-202ENST00000417043 FMN2Q9NZ56 1722 aa23.02■■□□□ 1.28
RHBDF1-202ENST00000417043 COL22A1Q8NFW1 1626 aaPredicted RBP23.01■■□□□ 1.27
RHBDF1-202ENST00000417043 USP21Q9UK80 565 aa23.01■■□□□ 1.27
RHBDF1-202ENST00000417043 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
RHBDF1-202ENST00000417043 RGS12O14924 1447 aa23■■□□□ 1.27
RHBDF1-202ENST00000417043 SIRT1Q96EB6 747 aa23■■□□□ 1.27
RHBDF1-202ENST00000417043 DHX57Q6P158 1386 aaKnown RBP23■■□□□ 1.27
RHBDF1-202ENST00000417043 MYOM2P54296 1465 aa22.99■■□□□ 1.27
RHBDF1-202ENST00000417043 PRAM1Q96QH2 718 aa22.99■■□□□ 1.27
RHBDF1-202ENST00000417043 FNBP4Q8N3X1 1017 aaPredicted RBP22.98■■□□□ 1.27
RHBDF1-202ENST00000417043 KDM2AQ9Y2K7 1162 aa22.98■■□□□ 1.27
RHBDF1-202ENST00000417043 KRT28Q7Z3Y7 464 aa22.95■■□□□ 1.26
RHBDF1-202ENST00000417043 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
RHBDF1-202ENST00000417043 TRPC5Q9UL62 973 aaPredicted RBP22.94■■□□□ 1.26
RHBDF1-202ENST00000417043 SPATA31A3Q5VYP0 1347 aa22.93■■□□□ 1.26
RHBDF1-202ENST00000417043 POGKQ9P215 609 aa22.93■■□□□ 1.26
RHBDF1-202ENST00000417043 PHF8Q9UPP1 1060 aa22.93■■□□□ 1.26
RHBDF1-202ENST00000417043 MARF1Q9Y4F3 1742 aaKnown RBP22.92■■□□□ 1.26
RHBDF1-202ENST00000417043 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
RHBDF1-202ENST00000417043 TRAK1Q9UPV9 953 aa22.92■■□□□ 1.26
RHBDF1-202ENST00000417043 KIF1AQ12756 1690 aa22.91■■□□□ 1.26
RHBDF1-202ENST00000417043 ATRNO75882 1429 aa22.91■■□□□ 1.26
RHBDF1-202ENST00000417043 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
RHBDF1-202ENST00000417043 BCL9LQ86UU0 1499 aa22.9■■□□□ 1.26
RHBDF1-202ENST00000417043 ADGRB1O14514 1584 aa22.89■■□□□ 1.26
RHBDF1-202ENST00000417043 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
RHBDF1-202ENST00000417043 CABLES1Q8TDN4 633 aa22.88■■□□□ 1.25
RHBDF1-202ENST00000417043 DLC1Q96QB1 1528 aa22.87■■□□□ 1.25
RHBDF1-202ENST00000417043 HRCP23327 699 aa22.87■■□□□ 1.25
RHBDF1-202ENST00000417043 LMOD2Q6P5Q4 547 aa22.86■■□□□ 1.25
RHBDF1-202ENST00000417043 USP32Q8NFA0 1604 aa22.86■■□□□ 1.25
RHBDF1-202ENST00000417043 MINK1Q8N4C8 1332 aaPredicted RBP22.85■■□□□ 1.25
RHBDF1-202ENST00000417043 PSME1Q06323 249 aa22.85■■□□□ 1.25
RHBDF1-202ENST00000417043 GJD4Q96KN9 370 aaPredicted RBP22.83■■□□□ 1.25
RHBDF1-202ENST00000417043 TNS3Q68CZ2 1445 aa22.82■■□□□ 1.24
RHBDF1-202ENST00000417043 HAP1P54257 671 aaPredicted RBP22.82■■□□□ 1.24
RHBDF1-202ENST00000417043 UNC5CLQ8IV45 518 aa22.81■■□□□ 1.24
RHBDF1-202ENST00000417043 EP400Q96L91 3159 aa22.81■■□□□ 1.24
RHBDF1-202ENST00000417043 PRR36Q9H6K5 1346 aa22.81■■□□□ 1.24
RHBDF1-202ENST00000417043 SLIT2O94813 1529 aa22.8■■□□□ 1.24
RHBDF1-202ENST00000417043 ADGRB2O60241 1585 aa22.8■■□□□ 1.24
RHBDF1-202ENST00000417043 ATAD2Q6PL18 1390 aa22.79■■□□□ 1.24
RHBDF1-202ENST00000417043 ANKARQ7Z5J8 1434 aa22.79■■□□□ 1.24
RHBDF1-202ENST00000417043 SBNO1A3KN83 1393 aa22.78■■□□□ 1.24
RHBDF1-202ENST00000417043 WASLO00401 505 aaPredicted RBP22.77■■□□□ 1.24
RHBDF1-202ENST00000417043 STAC3Q96MF2 364 aa22.77■■□□□ 1.24
RHBDF1-202ENST00000417043 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.77■■□□□ 1.23
RHBDF1-202ENST00000417043 RALGAPBQ86X10 1494 aa22.75■■□□□ 1.23
RHBDF1-202ENST00000417043 GLI3P10071 1580 aa22.75■■□□□ 1.23
RHBDF1-202ENST00000417043 ABCA3Q99758 1704 aa22.74■■□□□ 1.23
RHBDF1-202ENST00000417043 ARHGEF10O15013 1369 aa22.74■■□□□ 1.23
RHBDF1-202ENST00000417043 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
RHBDF1-202ENST00000417043 ARHGEF28Q8N1W1 1705 aaKnown RBP22.73■■□□□ 1.23
RHBDF1-202ENST00000417043 TRPM3Q9HCF6 1732 aaPredicted RBP22.73■■□□□ 1.23
RHBDF1-202ENST00000417043 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
RHBDF1-202ENST00000417043 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
RHBDF1-202ENST00000417043 NGDNQ8NEJ9 315 aaKnown RBP22.71■■□□□ 1.23
RHBDF1-202ENST00000417043 CCDC9Q9Y3X0 531 aaKnown RBP22.7■■□□□ 1.22
RHBDF1-202ENST00000417043 GPRASP1Q5JY77 1395 aa22.7■■□□□ 1.22
RHBDF1-202ENST00000417043 BRWD3Q6RI45 1802 aa22.7■■□□□ 1.22
RHBDF1-202ENST00000417043 EIF3AQ14152 1382 aaKnown RBP22.69■■□□□ 1.22
RHBDF1-202ENST00000417043 VPS72Q15906 364 aa22.69■■□□□ 1.22
RHBDF1-202ENST00000417043 NBPF1Q3BBV0 1214 aa22.69■■□□□ 1.22
RHBDF1-202ENST00000417043 ALS2Q96Q42 1657 aa22.68■■□□□ 1.22
RHBDF1-202ENST00000417043 PAK3O75914 559 aaPredicted RBP22.68■■□□□ 1.22
RHBDF1-202ENST00000417043 NUDT16Q96DE0 195 aaKnown RBP22.68■■□□□ 1.22
RHBDF1-202ENST00000417043 SEPT12Q8IYM1 358 aa22.67■■□□□ 1.22
RHBDF1-202ENST00000417043 CDK19Q9BWU1 502 aa22.67■■□□□ 1.22
RHBDF1-202ENST00000417043 NWD2Q9ULI1 1742 aa22.66■■□□□ 1.22
RHBDF1-202ENST00000417043 SRCAPQ6ZRS2 3230 aa22.65■■□□□ 1.22
RHBDF1-202ENST00000417043 BTG4Q9NY30 223 aa22.65■■□□□ 1.22
RHBDF1-202ENST00000417043 ATP7BP35670 1465 aa22.64■■□□□ 1.21
RHBDF1-202ENST00000417043 ONECUT3O60422 494 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms