RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 KCNA6P17658 529 aa11.44□□□□□ -0.58
MDC1-203ENST00000417033 AMOTL2Q9Y2J4 779 aa11.44□□□□□ -0.58
MDC1-203ENST00000417033 STRCP1A6NGW2 1772 aa11.44□□□□□ -0.58
MDC1-203ENST00000417033 ARHGEF28Q8N1W1 1705 aaKnown RBP11.43□□□□□ -0.58
MDC1-203ENST00000417033 NWD1Q149M9 1564 aa11.43□□□□□ -0.58
MDC1-203ENST00000417033 RBM33Q96EV2 1170 aaKnown RBP11.43□□□□□ -0.58
MDC1-203ENST00000417033 TECPR2O15040 1411 aa11.43□□□□□ -0.58
MDC1-203ENST00000417033 ABCC11Q96J66 1382 aa11.42□□□□□ -0.58
MDC1-203ENST00000417033 CPS1P31327 1500 aa11.42□□□□□ -0.58
MDC1-203ENST00000417033 SAFB2Q14151 953 aaKnown RBP eCLIP11.42□□□□□ -0.58
MDC1-203ENST00000417033 WAPLQ7Z5K2 1190 aa11.42□□□□□ -0.58
MDC1-203ENST00000417033 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
MDC1-203ENST00000417033 CHD2O14647 1828 aaKnown RBP11.42□□□□□ -0.58
MDC1-203ENST00000417033 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
MDC1-203ENST00000417033 DLC1Q96QB1 1528 aa11.41□□□□□ -0.58
MDC1-203ENST00000417033 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
MDC1-203ENST00000417033 ST20-MTHFSA0A0A6YYL1 179 aa11.4□□□□□ -0.58
MDC1-203ENST00000417033 PTCH1Q13635 1447 aa11.4□□□□□ -0.58
MDC1-203ENST00000417033 EIF4G2P78344 907 aaKnown RBP eCLIP11.39□□□□□ -0.59
MDC1-203ENST00000417033 CENPJQ9HC77 1338 aaPredicted RBP11.38□□□□□ -0.59
MDC1-203ENST00000417033 TESK2Q96S53 571 aa11.38□□□□□ -0.59
MDC1-203ENST00000417033 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
MDC1-203ENST00000417033 MINK1Q8N4C8 1332 aaPredicted RBP11.37□□□□□ -0.59
MDC1-203ENST00000417033 QRICH2Q9H0J4 1663 aa11.37□□□□□ -0.59
MDC1-203ENST00000417033 FAM135BQ49AJ0 1406 aa11.37□□□□□ -0.59
MDC1-203ENST00000417033 EIF3AQ14152 1382 aaKnown RBP11.37□□□□□ -0.59
MDC1-203ENST00000417033 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.37□□□□□ -0.59
MDC1-203ENST00000417033 LTBP4Q8N2S1 1624 aa11.36□□□□□ -0.59
MDC1-203ENST00000417033 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
MDC1-203ENST00000417033 POLA2Q14181 598 aa11.36□□□□□ -0.59
MDC1-203ENST00000417033 POGKQ9P215 609 aa11.36□□□□□ -0.59
MDC1-203ENST00000417033 DISP3Q9P2K9 1392 aa11.36□□□□□ -0.59
MDC1-203ENST00000417033 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
MDC1-203ENST00000417033 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
MDC1-203ENST00000417033 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
MDC1-203ENST00000417033 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
MDC1-203ENST00000417033 SIRT1Q96EB6 747 aa11.34□□□□□ -0.59
MDC1-203ENST00000417033 NALCNQ8IZF0 1738 aa11.34□□□□□ -0.59
MDC1-203ENST00000417033 ABCB7O75027 752 aa11.33□□□□□ -0.6
MDC1-203ENST00000417033 DSG3P32926 999 aa11.33□□□□□ -0.6
MDC1-203ENST00000417033 FBXO41Q8TF61 875 aa11.33□□□□□ -0.6
MDC1-203ENST00000417033 ADGRL3Q9HAR2 1447 aa11.33□□□□□ -0.6
MDC1-203ENST00000417033 XIRP1Q702N8 1843 aaKnown RBP11.32□□□□□ -0.6
MDC1-203ENST00000417033 SBNO2Q9Y2G9 1366 aa11.32□□□□□ -0.6
MDC1-203ENST00000417033 ADGRB2O60241 1585 aa11.31□□□□□ -0.6
MDC1-203ENST00000417033 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
MDC1-203ENST00000417033 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
MDC1-203ENST00000417033 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
MDC1-203ENST00000417033 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
MDC1-203ENST00000417033 PRR36Q9H6K5 1346 aa11.3□□□□□ -0.6
MDC1-203ENST00000417033 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
MDC1-203ENST00000417033 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
MDC1-203ENST00000417033 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
MDC1-203ENST00000417033 WASHC2AQ641Q2 1341 aa11.29□□□□□ -0.6
MDC1-203ENST00000417033 CCDC7Q96M83 1385 aa11.28□□□□□ -0.6
MDC1-203ENST00000417033 CDC42BPGQ6DT37 1551 aa11.28□□□□□ -0.6
MDC1-203ENST00000417033 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
MDC1-203ENST00000417033 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
MDC1-203ENST00000417033 TMF1P82094 1093 aa11.28□□□□□ -0.6
MDC1-203ENST00000417033 EVC2Q86UK5 1308 aa11.27□□□□□ -0.61
MDC1-203ENST00000417033 USP32Q8NFA0 1604 aa11.27□□□□□ -0.61
MDC1-203ENST00000417033 FMN2Q9NZ56 1722 aa11.26□□□□□ -0.61
MDC1-203ENST00000417033 ATP7BP35670 1465 aa11.26□□□□□ -0.61
MDC1-203ENST00000417033 SRPK2P78362 688 aaKnown RBP11.26□□□□□ -0.61
MDC1-203ENST00000417033 NCOA3Q9Y6Q9 1424 aa11.26□□□□□ -0.61
MDC1-203ENST00000417033 C19orf44Q9H6X5 657 aa11.25□□□□□ -0.61
MDC1-203ENST00000417033 MSH6P52701 1360 aa11.25□□□□□ -0.61
MDC1-203ENST00000417033 MST1RQ04912 1400 aa11.25□□□□□ -0.61
MDC1-203ENST00000417033 MYOM1P52179 1685 aa11.24□□□□□ -0.61
MDC1-203ENST00000417033 DCCP43146 1447 aa11.24□□□□□ -0.61
MDC1-203ENST00000417033 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
MDC1-203ENST00000417033 C1orf167Q5SNV9 1468 aa11.23□□□□□ -0.61
MDC1-203ENST00000417033 TOPAZ1Q8N9V7 1692 aa11.23□□□□□ -0.61
MDC1-203ENST00000417033 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
MDC1-203ENST00000417033 ANKARQ7Z5J8 1434 aa11.22□□□□□ -0.61
MDC1-203ENST00000417033 SLC12A5Q9H2X9 1139 aa11.22□□□□□ -0.61
MDC1-203ENST00000417033 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 PPIP5K1Q6PFW1 1433 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 ATF3P18847 181 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 FKBP8Q14318 412 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
MDC1-203ENST00000417033 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
MDC1-203ENST00000417033 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
MDC1-203ENST00000417033 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
MDC1-203ENST00000417033 DDX10Q13206 875 aaKnown RBP11.19□□□□□ -0.62
MDC1-203ENST00000417033 MKRN4PQ13434 485 aaPredicted RBP11.19□□□□□ -0.62
MDC1-203ENST00000417033 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
MDC1-203ENST00000417033 DDX17Q92841 729 aaKnown RBP11.19□□□□□ -0.62
MDC1-203ENST00000417033 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
MDC1-203ENST00000417033 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
MDC1-203ENST00000417033 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
MDC1-203ENST00000417033 A0A1W2PP64 1363 aa11.17□□□□□ -0.62
MDC1-203ENST00000417033 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
MDC1-203ENST00000417033 BRINP3Q76B58 766 aa11.17□□□□□ -0.62
MDC1-203ENST00000417033 SLAIN2Q9P270 581 aa11.17□□□□□ -0.62
MDC1-203ENST00000417033 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
MDC1-203ENST00000417033 ACEP12821 1306 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms